RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 PPDPFQ9H3Y8 114 aa14.07□□□□□ -0.16
SRPK1-210ENST00000508473 LPAP08519 4548 aa14.06□□□□□ -0.16
SRPK1-210ENST00000508473 TRAV23DV6A0A075B6W5 121 aa14.06□□□□□ -0.16
SRPK1-210ENST00000508473 HIST3H2BBQ8N257 126 aa14.06□□□□□ -0.16
SRPK1-210ENST00000508473 SPANXCQ9NY87 97 aa14.05□□□□□ -0.16
SRPK1-210ENST00000508473 ERC2-IT1O76042 136 aa14.04□□□□□ -0.16
SRPK1-210ENST00000508473 SCGB1D4Q6XE38 83 aa14.04□□□□□ -0.16
SRPK1-210ENST00000508473 S100A2P29034 98 aa14.03□□□□□ -0.16
SRPK1-210ENST00000508473 HIST1H2BLQ99880 126 aa14.03□□□□□ -0.16
SRPK1-210ENST00000508473 Q6ZRX8 168 aa14.02□□□□□ -0.17
SRPK1-210ENST00000508473 OR13C6PQ8NH95 151 aa14.02□□□□□ -0.17
SRPK1-210ENST00000508473 Q9BRP9 147 aa14.02□□□□□ -0.17
SRPK1-210ENST00000508473 ZNF73O43830 326 aaPredicted RBP14.01□□□□□ -0.17
SRPK1-210ENST00000508473 GAGE2AQ6NT46 116 aa14.01□□□□□ -0.17
SRPK1-210ENST00000508473 PCP2Q8IVA1 136 aa14□□□□□ -0.17
SRPK1-210ENST00000508473 AKR1D1P51857 326 aa13.99□□□□□ -0.17
SRPK1-210ENST00000508473 S100A6P06703 90 aa13.98□□□□□ -0.17
SRPK1-210ENST00000508473 SPANXDQ9BXN6 97 aa13.97□□□□□ -0.17
SRPK1-210ENST00000508473 LINC00483Q53H64 154 aa13.96□□□□□ -0.17
SRPK1-210ENST00000508473 RETNLBQ9BQ08 111 aa13.96□□□□□ -0.17
SRPK1-210ENST00000508473 JOSD1Q15040 202 aaPredicted RBP13.95□□□□□ -0.18
SRPK1-210ENST00000508473 CBY1Q9Y3M2 126 aa13.95□□□□□ -0.18
SRPK1-210ENST00000508473 HINT1P49773 126 aaPredicted RBP13.93□□□□□ -0.18
SRPK1-210ENST00000508473 LINC00518Q8N0U6 118 aa13.93□□□□□ -0.18
SRPK1-210ENST00000508473 SNRPEP62304 92 aaKnown RBP13.92□□□□□ -0.18
SRPK1-210ENST00000508473 Q8NBF4 154 aa13.91□□□□□ -0.18
SRPK1-210ENST00000508473 MUSTN1Q8IVN3 82 aa13.9□□□□□ -0.18
SRPK1-210ENST00000508473 IGLV9-49A0A0B4J1Y8 123 aa13.89□□□□□ -0.19
SRPK1-210ENST00000508473 IFITM1P13164 125 aa13.89□□□□□ -0.19
SRPK1-210ENST00000508473 ST20-AS1Q8NBB2 130 aa13.89□□□□□ -0.19
SRPK1-210ENST00000508473 C4orf48Q5BLP8 95 aa13.88□□□□□ -0.19
SRPK1-210ENST00000508473 SPAG11AQ6PDA7 123 aa13.88□□□□□ -0.19
SRPK1-210ENST00000508473 COPS9Q8WXC6 57 aa13.88□□□□□ -0.19
SRPK1-210ENST00000508473 RNF213Q63HN8 5207 aa13.87□□□□□ -0.19
SRPK1-210ENST00000508473 HSBP1L1C9JCN9 74 aa13.87□□□□□ -0.19
SRPK1-210ENST00000508473 MOBPQ13875 183 aa13.87□□□□□ -0.19
SRPK1-210ENST00000508473 Q6ZVH6 145 aa13.87□□□□□ -0.19
SRPK1-210ENST00000508473 CTAG1AP78358 180 aa13.85□□□□□ -0.19
SRPK1-210ENST00000508473 C6orf99Q4VX62 202 aa13.85□□□□□ -0.19
SRPK1-210ENST00000508473 A6NDN8 102 aa13.83□□□□□ -0.2
SRPK1-210ENST00000508473 COX7BP24311 80 aa13.83□□□□□ -0.2
SRPK1-210ENST00000508473 SCGB1D1O95968 90 aa13.82□□□□□ -0.2
SRPK1-210ENST00000508473 C5orf52A6NGY3 159 aa13.81□□□□□ -0.2
SRPK1-210ENST00000508473 DHRS4-AS1Q9P1J3 65 aa13.81□□□□□ -0.2
SRPK1-210ENST00000508473 ELOF1P60002 83 aaKnown RBP13.8□□□□□ -0.2
SRPK1-210ENST00000508473 SSBP3-AS1Q7Z2R9 100 aa13.79□□□□□ -0.2
SRPK1-210ENST00000508473 IGLV7-46A0A075B6I9 117 aa13.78□□□□□ -0.2
SRPK1-210ENST00000508473 C9orf153Q5TBE3 101 aa13.78□□□□□ -0.2
SRPK1-210ENST00000508473 SPINK1P00995 79 aa13.76□□□□□ -0.21
SRPK1-210ENST00000508473 TRAV13-2A0A0B4J235 113 aa13.73□□□□□ -0.21
SRPK1-210ENST00000508473 TRBV7-6A0A0J9YX20 115 aa13.72□□□□□ -0.21
SRPK1-210ENST00000508473 SPRR1BP22528 89 aa13.72□□□□□ -0.21
SRPK1-210ENST00000508473 DEFB105AQ8NG35 78 aa13.71□□□□□ -0.21
SRPK1-210ENST00000508473 A0A1B0GWB2 263 aa13.7□□□□□ -0.22
SRPK1-210ENST00000508473 SMIM11BQ8TCY0 68 aa13.7□□□□□ -0.22
SRPK1-210ENST00000508473 A4D1N5 150 aa13.69□□□□□ -0.22
SRPK1-210ENST00000508473 TAL2Q16559 108 aa13.69□□□□□ -0.22
SRPK1-210ENST00000508473 TPRXLQ17RH7 258 aa13.68□□□□□ -0.22
SRPK1-210ENST00000508473 COX8AP10176 69 aa13.67□□□□□ -0.22
SRPK1-210ENST00000508473 SLC25A34Q6PIV7 304 aa13.67□□□□□ -0.22
SRPK1-210ENST00000508473 CDIP1Q9H305 208 aa13.67□□□□□ -0.22
SRPK1-210ENST00000508473 FP248Q71RG6 208 aaPredicted RBP13.66□□□□□ -0.22
SRPK1-210ENST00000508473 LAMTOR3Q9UHA4 124 aa13.66□□□□□ -0.22
SRPK1-210ENST00000508473 Q1RN00 199 aa13.64□□□□□ -0.23
SRPK1-210ENST00000508473 RPS29P62273 56 aaKnown RBP13.63□□□□□ -0.23
SRPK1-210ENST00000508473 Q8N377 158 aa13.63□□□□□ -0.23
SRPK1-210ENST00000508473 HIST1H4GQ99525 98 aa13.63□□□□□ -0.23
SRPK1-210ENST00000508473 TEX49A0A1B0GTD5 131 aa13.62□□□□□ -0.23
SRPK1-210ENST00000508473 C14orf144Q96I85 54 aa13.62□□□□□ -0.23
SRPK1-210ENST00000508473 C12orf57Q99622 126 aa13.62□□□□□ -0.23
SRPK1-210ENST00000508473 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
SRPK1-210ENST00000508473 HRCT1Q6UXD1 115 aa13.6□□□□□ -0.23
SRPK1-210ENST00000508473 DLEU1O43261 78 aa13.59□□□□□ -0.23
SRPK1-210ENST00000508473 SLC25A20O43772 301 aa13.59□□□□□ -0.23
SRPK1-210ENST00000508473 SPATA45Q537H7 98 aa13.59□□□□□ -0.23
SRPK1-210ENST00000508473 LINC01547P58512 204 aaPredicted RBP13.58□□□□□ -0.24
SRPK1-210ENST00000508473 VAMP3Q15836 100 aa13.57□□□□□ -0.24
SRPK1-210ENST00000508473 NHP2Q9NX24 153 aaKnown RBP13.57□□□□□ -0.24
SRPK1-210ENST00000508473 IGLV5-48A0A075B6I7 105 aa13.56□□□□□ -0.24
SRPK1-210ENST00000508473 SMIM29Q86T20 159 aa13.56□□□□□ -0.24
SRPK1-210ENST00000508473 VAMP8Q9BV40 100 aa13.55□□□□□ -0.24
SRPK1-210ENST00000508473 KRTAP13-3Q3SY46 172 aa13.54□□□□□ -0.24
SRPK1-210ENST00000508473 LINC00575Q6W349 94 aa13.52□□□□□ -0.25
SRPK1-210ENST00000508473 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
SRPK1-210ENST00000508473 MUC17Q685J3 4493 aa13.5□□□□□ -0.25
SRPK1-210ENST00000508473 MUC2Q02817 5179 aa13.5□□□□□ -0.25
SRPK1-210ENST00000508473 HIGD1BQ9P298 99 aa13.49□□□□□ -0.25
SRPK1-210ENST00000508473 A0A0G2JQZ4 141 aa13.48□□□□□ -0.25
SRPK1-210ENST00000508473 hADV29S1A0JD25 119 aa13.47□□□□□ -0.25
SRPK1-210ENST00000508473 H7C2G1 150 aa13.47□□□□□ -0.25
SRPK1-210ENST00000508473 C2orf91Q6ZV80 131 aa13.47□□□□□ -0.25
SRPK1-210ENST00000508473 LIMD2Q9BT23 127 aa13.47□□□□□ -0.25
SRPK1-210ENST00000508473 CFC1BP0CG36 223 aa13.46□□□□□ -0.25
SRPK1-210ENST00000508473 CFC1P0CG37 223 aa13.46□□□□□ -0.25
SRPK1-210ENST00000508473 Q6ZQY7 126 aa13.45□□□□□ -0.26
SRPK1-210ENST00000508473 TMA7Q9Y2S6 64 aaKnown RBP13.44□□□□□ -0.26
SRPK1-210ENST00000508473 CD164Q04900 197 aa13.43□□□□□ -0.26
SRPK1-210ENST00000508473 RAB37Q96AX2 223 aa13.43□□□□□ -0.26
SRPK1-210ENST00000508473 BVES-AS1Q5T3Y7 98 aa13.41□□□□□ -0.26
SRPK1-210ENST00000508473 PYY3Q5JQD4 70 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms