RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 DHRS4-AS1Q9P1J3 65 aa11.6□□□□□ -0.55
NUP54-205ENST00000507257 CCDC168Q8NDH2 2452 aa11.6□□□□□ -0.55
NUP54-205ENST00000507257 TNP2Q05952 138 aa11.59□□□□□ -0.55
NUP54-205ENST00000507257 PLA2G2DQ9UNK4 145 aa11.59□□□□□ -0.55
NUP54-205ENST00000507257 NBEAL2Q6ZNJ1 2754 aa11.59□□□□□ -0.55
NUP54-205ENST00000507257 WFDC10BQ8IUB3 73 aa11.58□□□□□ -0.55
NUP54-205ENST00000507257 SMIM29Q86T20 159 aa11.57□□□□□ -0.56
NUP54-205ENST00000507257 BRK1Q8WUW1 75 aa11.57□□□□□ -0.56
NUP54-205ENST00000507257 NKAPP1Q8N9T2 125 aa11.56□□□□□ -0.56
NUP54-205ENST00000507257 ZCCHC13Q8WW36 166 aaKnown RBP11.56□□□□□ -0.56
NUP54-205ENST00000507257 SPRR4Q96PI1 79 aa11.56□□□□□ -0.56
NUP54-205ENST00000507257 A0A1W2PNM2 257 aa11.56□□□□□ -0.56
NUP54-205ENST00000507257 hDV103S1A0JD37 113 aa11.56□□□□□ -0.56
NUP54-205ENST00000507257 Q8NBF4 154 aa11.56□□□□□ -0.56
NUP54-205ENST00000507257 TLX1NBP0CAT3 122 aa11.55□□□□□ -0.56
NUP54-205ENST00000507257 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
NUP54-205ENST00000507257 KRTAP4-16G5E9R7 235 aaPredicted RBP11.54□□□□□ -0.56
NUP54-205ENST00000507257 SYCNQ0VAF6 134 aa11.54□□□□□ -0.56
NUP54-205ENST00000507257 Q6ZRX8 168 aa11.54□□□□□ -0.56
NUP54-205ENST00000507257 MPLKIPQ8TAP9 179 aa11.54□□□□□ -0.56
NUP54-205ENST00000507257 IGLV5-37A0A075B6J1 123 aa11.53□□□□□ -0.56
NUP54-205ENST00000507257 SPRR1AP35321 89 aa11.53□□□□□ -0.56
NUP54-205ENST00000507257 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
NUP54-205ENST00000507257 C1orf137Q5JT78 98 aa11.52□□□□□ -0.57
NUP54-205ENST00000507257 DEFB105AQ8NG35 78 aa11.52□□□□□ -0.57
NUP54-205ENST00000507257 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.57
NUP54-205ENST00000507257 ETDCA0A1B0GVM5 59 aa11.51□□□□□ -0.57
NUP54-205ENST00000507257 SERTAD4-AS1Q5TG53 156 aa11.51□□□□□ -0.57
NUP54-205ENST00000507257 Q1T7F1 81 aa11.5□□□□□ -0.57
NUP54-205ENST00000507257 PKIGQ9Y2B9 76 aa11.5□□□□□ -0.57
NUP54-205ENST00000507257 MTORP42345 2549 aa11.5□□□□□ -0.57
NUP54-205ENST00000507257 LINC01556Q5JQF7 62 aa11.5□□□□□ -0.57
NUP54-205ENST00000507257 DSCR10P59022 87 aa11.49□□□□□ -0.57
NUP54-205ENST00000507257 Q9BRP9 147 aa11.48□□□□□ -0.57
NUP54-205ENST00000507257 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
NUP54-205ENST00000507257 CYP4F30PQ9H0H9 118 aa11.48□□□□□ -0.57
NUP54-205ENST00000507257 IGLV1-50A0A075B6I6 118 aa11.47□□□□□ -0.57
NUP54-205ENST00000507257 C1orf195Q5TG92 126 aa11.46□□□□□ -0.58
NUP54-205ENST00000507257 ACANP16112 2415 aa11.45□□□□□ -0.58
NUP54-205ENST00000507257 C1orf64Q8NEQ6 169 aa11.45□□□□□ -0.58
NUP54-205ENST00000507257 IGKV2D-24A0A075B6R9 120 aa11.44□□□□□ -0.58
NUP54-205ENST00000507257 PDZD2O15018 2839 aa11.44□□□□□ -0.58
NUP54-205ENST00000507257 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.41□□□□□ -0.58
NUP54-205ENST00000507257 K7EQZ3 153 aa11.41□□□□□ -0.58
NUP54-205ENST00000507257 NDUFB1O75438 58 aa11.41□□□□□ -0.58
NUP54-205ENST00000507257 PRR15Q8IV56 129 aa11.41□□□□□ -0.58
NUP54-205ENST00000507257 HCG22E2RYF7 251 aa11.41□□□□□ -0.58
NUP54-205ENST00000507257 ST20-AS1Q8NBB2 130 aa11.39□□□□□ -0.59
NUP54-205ENST00000507257 DNAH10OSP0CZ25 163 aa11.38□□□□□ -0.59
NUP54-205ENST00000507257 VWFP04275 2813 aa11.36□□□□□ -0.59
NUP54-205ENST00000507257 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
NUP54-205ENST00000507257 V9GYY9 64 aa11.36□□□□□ -0.59
NUP54-205ENST00000507257 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
NUP54-205ENST00000507257 MRPL55Q7Z7F7 128 aaKnown RBP11.33□□□□□ -0.6
NUP54-205ENST00000507257 PSCAO43653 123 aa11.33□□□□□ -0.6
NUP54-205ENST00000507257 LINC00476Q8WZB0 136 aa11.33□□□□□ -0.6
NUP54-205ENST00000507257 SMR3AQ99954 134 aa11.33□□□□□ -0.6
NUP54-205ENST00000507257 IGLV8-61A0A075B6I0 122 aa11.32□□□□□ -0.6
NUP54-205ENST00000507257 FAM168BA1KXE4 195 aa11.32□□□□□ -0.6
NUP54-205ENST00000507257 HIVEP1P15822 2718 aa11.31□□□□□ -0.6
NUP54-205ENST00000507257 UBE2BP63146 152 aa11.3□□□□□ -0.6
NUP54-205ENST00000507257 H3BPC8 53 aa11.29□□□□□ -0.6
NUP54-205ENST00000507257 MP68P56378 58 aa11.29□□□□□ -0.6
NUP54-205ENST00000507257 TRAV22A0A0B4J277 110 aa11.29□□□□□ -0.6
NUP54-205ENST00000507257 SPANXA2-OT1Q8N9U9 137 aa11.29□□□□□ -0.6
NUP54-205ENST00000507257 REG3GQ6UW15 175 aa11.28□□□□□ -0.6
NUP54-205ENST00000507257 IGFL1Q6UW32 110 aa11.27□□□□□ -0.6
NUP54-205ENST00000507257 RETNQ9HD89 108 aa11.27□□□□□ -0.6
NUP54-205ENST00000507257 DEFB131BA0A096LNP1 70 aa11.27□□□□□ -0.61
NUP54-205ENST00000507257 LRCOL1A6NCL2 159 aa11.25□□□□□ -0.61
NUP54-205ENST00000507257 KRTAP29-1A8MX34 341 aaPredicted RBP11.25□□□□□ -0.61
NUP54-205ENST00000507257 LINC00588Q9Y4M8 146 aa11.25□□□□□ -0.61
NUP54-205ENST00000507257 NOTCH2Q04721 2471 aa11.24□□□□□ -0.61
NUP54-205ENST00000507257 B9D2Q9BPU9 175 aa11.23□□□□□ -0.61
NUP54-205ENST00000507257 UNC79Q9P2D8 2635 aa11.21□□□□□ -0.61
NUP54-205ENST00000507257 C11orf45Q8TAV5 145 aa11.2□□□□□ -0.62
NUP54-205ENST00000507257 PSPHP1O15172 72 aa11.19□□□□□ -0.62
NUP54-205ENST00000507257 PMAIP1Q13794 54 aa11.19□□□□□ -0.62
NUP54-205ENST00000507257 SEC61GP60059 68 aa11.19□□□□□ -0.62
NUP54-205ENST00000507257 WFDC13Q8IUB5 93 aa11.19□□□□□ -0.62
NUP54-205ENST00000507257 ITPR2Q14571 2701 aa11.18□□□□□ -0.62
NUP54-205ENST00000507257 A0A087WSZ3 146 aa11.17□□□□□ -0.62
NUP54-205ENST00000507257 CASC10Q5T4H9 136 aa11.17□□□□□ -0.62
NUP54-205ENST00000507257 LINC00208Q96KT6 92 aa11.17□□□□□ -0.62
NUP54-205ENST00000507257 INAFM1C9JVW0 142 aa11.17□□□□□ -0.62
NUP54-205ENST00000507257 PRR4Q16378 134 aa11.17□□□□□ -0.62
NUP54-205ENST00000507257 KRTAP10-11P60412 298 aa11.15□□□□□ -0.62
NUP54-205ENST00000507257 H0Y9P7 68 aa11.15□□□□□ -0.62
NUP54-205ENST00000507257 LIMD2Q9BT23 127 aa11.15□□□□□ -0.62
NUP54-205ENST00000507257 TENM4Q6N022 2769 aa11.14□□□□□ -0.63
NUP54-205ENST00000507257 Q5VV11 94 aa11.14□□□□□ -0.63
NUP54-205ENST00000507257 DNAH1Q9P2D7 4330 aa11.14□□□□□ -0.63
NUP54-205ENST00000507257 A8MUN3 132 aa11.13□□□□□ -0.63
NUP54-205ENST00000507257 SPRR1BP22528 89 aa11.13□□□□□ -0.63
NUP54-205ENST00000507257 CASC2Q6XLA1 102 aa11.13□□□□□ -0.63
NUP54-205ENST00000507257 TENM1Q9UKZ4 2725 aa11.13□□□□□ -0.63
NUP54-205ENST00000507257 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
NUP54-205ENST00000507257 A8MWP4 228 aa11.11□□□□□ -0.63
NUP54-205ENST00000507257 C9orf163Q8N9P6 203 aa11.11□□□□□ -0.63
NUP54-205ENST00000507257 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms