RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 TFF3Q07654 80 aa1.06□□□□□ -2.24
SPCS3-202ENST00000507001 WFDC9Q8NEX5 89 aa1.06□□□□□ -2.24
SPCS3-202ENST00000507001 FDCSPQ8NFU4 85 aa1.06□□□□□ -2.24
SPCS3-202ENST00000507001 ARHGAP5-AS1Q96IT6 56 aa1.06□□□□□ -2.24
SPCS3-202ENST00000507001 GAFA1Q96PS6 74 aa1.06□□□□□ -2.24
SPCS3-202ENST00000507001 DEFB131BA0A096LNP1 70 aa1.05□□□□□ -2.24
SPCS3-202ENST00000507001 NBDYA0A0U1RRE5 68 aa1.05□□□□□ -2.24
SPCS3-202ENST00000507001 NDUFA1O15239 70 aa1.05□□□□□ -2.24
SPCS3-202ENST00000507001 TFF1P04155 84 aa1.05□□□□□ -2.24
SPCS3-202ENST00000507001 RPS27LQ71UM5 84 aaKnown RBP1.05□□□□□ -2.24
SPCS3-202ENST00000507001 LINC00472Q9H8W2 130 aa1.05□□□□□ -2.24
SPCS3-202ENST00000507001 TRGV1A0A0A0MS02 117 aa1.04□□□□□ -2.24
SPCS3-202ENST00000507001 LINC00959A0A1B0GUT2 108 aa1.04□□□□□ -2.24
SPCS3-202ENST00000507001 CPSF4LA6NMK7 179 aaKnown RBP1.04□□□□□ -2.24
SPCS3-202ENST00000507001 COX7BP24311 80 aa1.04□□□□□ -2.24
SPCS3-202ENST00000507001 DEFB112Q30KQ8 113 aa1.04□□□□□ -2.24
SPCS3-202ENST00000507001 CACNA1CQ13936 2221 aa1.04□□□□□ -2.24
SPCS3-202ENST00000507001 ABCA4P78363 2273 aa1.04□□□□□ -2.24
SPCS3-202ENST00000507001 IAPPP10997 89 aa1.03□□□□□ -2.24
SPCS3-202ENST00000507001 LINC00308Q8TCZ7 52 aa1.03□□□□□ -2.24
SPCS3-202ENST00000507001 TIMM8BQ9Y5J9 83 aaPredicted RBP1.03□□□□□ -2.24
SPCS3-202ENST00000507001 LOC730098B7Z3J9 87 aa1.02□□□□□ -2.25
SPCS3-202ENST00000507001 LY6G6CO95867 125 aa1.02□□□□□ -2.25
SPCS3-202ENST00000507001 HAMPP81172 84 aa1.02□□□□□ -2.25
SPCS3-202ENST00000507001 C5orf56Q8N8D9 126 aa1.02□□□□□ -2.25
SPCS3-202ENST00000507001 AHNAK2Q8IVF2 5795 aa1.02□□□□□ -2.25
SPCS3-202ENST00000507001 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 FBN2P35556 2912 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 A0A1B0GU69 56 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 LYNX1G3V0Z9 82 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 Q96NJ1 140 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 PDE4DIPQ5VU43 2346 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 CADP27708 2225 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 MED13LQ71F56 2210 aa1.01□□□□□ -2.25
SPCS3-202ENST00000507001 K7EIL1 84 aa1□□□□□ -2.25
SPCS3-202ENST00000507001 POLR2KP53803 58 aaKnown RBP1□□□□□ -2.25
SPCS3-202ENST00000507001 C10orf99Q6UWK7 81 aa1□□□□□ -2.25
SPCS3-202ENST00000507001 SMIM11BQ8TCY0 68 aa1□□□□□ -2.25
SPCS3-202ENST00000507001 PLAC4Q8WY50 150 aa1□□□□□ -2.25
SPCS3-202ENST00000507001 TTTY10Q9BZA0 68 aa1□□□□□ -2.25
SPCS3-202ENST00000507001 NOTCH1P46531 2555 aa1□□□□□ -2.25
SPCS3-202ENST00000507001 KNTC1P50748 2209 aa0.99□□□□□ -2.25
SPCS3-202ENST00000507001 ANKRD17O75179 2603 aaKnown RBP0.99□□□□□ -2.25
SPCS3-202ENST00000507001 CRIP1P50238 77 aa0.99□□□□□ -2.25
SPCS3-202ENST00000507001 LINC00158P58513 81 aa0.99□□□□□ -2.25
SPCS3-202ENST00000507001 PRCDQ00LT1 54 aa0.99□□□□□ -2.25
SPCS3-202ENST00000507001 Q8IZM0 81 aa0.99□□□□□ -2.25
SPCS3-202ENST00000507001 F5P12259 2224 aa0.99□□□□□ -2.25
SPCS3-202ENST00000507001 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.98□□□□□ -2.25
SPCS3-202ENST00000507001 COX6B2Q6YFQ2 88 aa0.98□□□□□ -2.25
SPCS3-202ENST00000507001 TP53AIP1Q9HCN2 124 aa0.98□□□□□ -2.25
SPCS3-202ENST00000507001 USF3Q68DE3 2245 aa0.98□□□□□ -2.25
SPCS3-202ENST00000507001 ZDBF2Q9HCK1 2354 aa0.97□□□□□ -2.25
SPCS3-202ENST00000507001 IGLV5-48A0A075B6I7 105 aa0.97□□□□□ -2.25
SPCS3-202ENST00000507001 A0A096LNT2 108 aa0.97□□□□□ -2.25
SPCS3-202ENST00000507001 ACYP2P14621 99 aa0.97□□□□□ -2.25
SPCS3-202ENST00000507001 SPINK9Q5DT21 86 aa0.97□□□□□ -2.25
SPCS3-202ENST00000507001 PTPRQQ9UMZ3 2332 aa0.97□□□□□ -2.25
SPCS3-202ENST00000507001 A0A0D9SG42 100 aa0.96□□□□□ -2.26
SPCS3-202ENST00000507001 SPTY2D1-AS1A0A0U1RR47 76 aa0.96□□□□□ -2.26
SPCS3-202ENST00000507001 G3V318 75 aa0.96□□□□□ -2.26
SPCS3-202ENST00000507001 ZNF469Q96JG9 3925 aaPredicted RBP0.95□□□□□ -2.26
SPCS3-202ENST00000507001 CNOT1A5YKK6 2376 aaKnown RBP0.95□□□□□ -2.26
SPCS3-202ENST00000507001 K7EQZ3 153 aa0.95□□□□□ -2.26
SPCS3-202ENST00000507001 PIGYQ3MUY2 71 aa0.95□□□□□ -2.26
SPCS3-202ENST00000507001 CDKN2A-AS1Q9UH64 79 aa0.95□□□□□ -2.26
SPCS3-202ENST00000507001 ASXL3Q9C0F0 2248 aa0.95□□□□□ -2.26
SPCS3-202ENST00000507001 GVQW2A0A096LPI5 108 aaPredicted RBP0.94□□□□□ -2.26
SPCS3-202ENST00000507001 RPS27P42677 84 aaKnown RBP0.94□□□□□ -2.26
SPCS3-202ENST00000507001 RPL39P62891 51 aaKnown RBP0.94□□□□□ -2.26
SPCS3-202ENST00000507001 Q6ZRX8 168 aa0.94□□□□□ -2.26
SPCS3-202ENST00000507001 KRTAP19-3Q7Z4W3 81 aa0.94□□□□□ -2.26
SPCS3-202ENST00000507001 DEFB106AQ8N104 65 aa0.94□□□□□ -2.26
SPCS3-202ENST00000507001 URB1O60287 2271 aaKnown RBP0.94□□□□□ -2.26
SPCS3-202ENST00000507001 ZNF462Q96JM2 2506 aa0.93□□□□□ -2.26
SPCS3-202ENST00000507001 I3L2K1 104 aa0.93□□□□□ -2.26
SPCS3-202ENST00000507001 SPINK13Q1W4C9 94 aa0.93□□□□□ -2.26
SPCS3-202ENST00000507001 RPL39LQ96EH5 51 aaKnown RBP0.93□□□□□ -2.26
SPCS3-202ENST00000507001 C6orf48Q9UBA6 75 aa0.93□□□□□ -2.26
SPCS3-202ENST00000507001 ASH1LQ9NR48 2969 aaKnown RBP0.92□□□□□ -2.26
SPCS3-202ENST00000507001 PLCE1Q9P212 2302 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 H3BSH0 61 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 M0QY20 66 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 CCL22O00626 93 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 DEFB131AP59861 70 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 SSBP3-AS1Q7Z2R9 100 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 DEFB123Q8N688 67 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 TMEM167AQ8TBQ9 72 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 PRO3102Q9H379 93 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 AHCTF1Q8WYP5 2266 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 DOPEY2Q9Y3R5 2298 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 KNL1Q8NG31 2342 aa0.92□□□□□ -2.26
SPCS3-202ENST00000507001 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.91□□□□□ -2.26
SPCS3-202ENST00000507001 H0YAA0 97 aa0.91□□□□□ -2.26
SPCS3-202ENST00000507001 RPL37P61927 97 aaKnown RBP0.91□□□□□ -2.26
SPCS3-202ENST00000507001 KLK9Q2XQG4 91 aa0.91□□□□□ -2.26
SPCS3-202ENST00000507001 MINOS1Q5TGZ0 78 aa0.91□□□□□ -2.26
SPCS3-202ENST00000507001 TPRP12270 2363 aaKnown RBP0.91□□□□□ -2.26
SPCS3-202ENST00000507001 ABCA1O95477 2261 aa0.9□□□□□ -2.26
SPCS3-202ENST00000507001 K7EIM0 57 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms