RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 RPL37AP8A6NKH3 93 aa4.98□□□□□ -1.61
PPARGC1A-204ENST00000506055 J3KT08 172 aa4.98□□□□□ -1.61
PPARGC1A-204ENST00000506055 TMEM258P61165 79 aa4.98□□□□□ -1.61
PPARGC1A-204ENST00000506055 PRB2P02812 416 aaPredicted RBP4.98□□□□□ -1.61
PPARGC1A-204ENST00000506055 CXCL6P80162 114 aa4.98□□□□□ -1.61
PPARGC1A-204ENST00000506055 C7orf33Q8WU49 177 aa4.97□□□□□ -1.61
PPARGC1A-204ENST00000506055 FAM168BA1KXE4 195 aa4.97□□□□□ -1.61
PPARGC1A-204ENST00000506055 DPH3Q96FX2 82 aa4.97□□□□□ -1.61
PPARGC1A-204ENST00000506055 KCNQ1DNQ9H478 68 aa4.97□□□□□ -1.61
PPARGC1A-204ENST00000506055 F8P00451 2351 aa4.97□□□□□ -1.61
PPARGC1A-204ENST00000506055 NOTCH1P46531 2555 aa4.97□□□□□ -1.61
PPARGC1A-204ENST00000506055 DNAH10OSP0CZ25 163 aa4.96□□□□□ -1.61
PPARGC1A-204ENST00000506055 CASC10Q5T4H9 136 aa4.96□□□□□ -1.61
PPARGC1A-204ENST00000506055 LINC00588Q9Y4M8 146 aa4.96□□□□□ -1.62
PPARGC1A-204ENST00000506055 F8WDY8 70 aa4.95□□□□□ -1.62
PPARGC1A-204ENST00000506055 C3orf84H3BNL1 204 aa4.95□□□□□ -1.62
PPARGC1A-204ENST00000506055 MRAPQ8TCY5 172 aa4.95□□□□□ -1.62
PPARGC1A-204ENST00000506055 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
PPARGC1A-204ENST00000506055 FAM19A5Q7Z5A7 132 aaPredicted RBP4.95□□□□□ -1.62
PPARGC1A-204ENST00000506055 Q8N9L7 120 aa4.95□□□□□ -1.62
PPARGC1A-204ENST00000506055 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
PPARGC1A-204ENST00000506055 RPS28P62857 69 aaKnown RBP4.94□□□□□ -1.62
PPARGC1A-204ENST00000506055 Q8N377 158 aa4.94□□□□□ -1.62
PPARGC1A-204ENST00000506055 NREPQ16612 68 aa4.94□□□□□ -1.62
PPARGC1A-204ENST00000506055 SNURFQ9Y675 71 aa4.94□□□□□ -1.62
PPARGC1A-204ENST00000506055 TM2D3Q9BRN9 247 aa4.93□□□□□ -1.62
PPARGC1A-204ENST00000506055 IGLV1-50A0A075B6I6 118 aa4.93□□□□□ -1.62
PPARGC1A-204ENST00000506055 ETDCA0A1B0GVM5 59 aa4.93□□□□□ -1.62
PPARGC1A-204ENST00000506055 BCE1O60756 84 aa4.93□□□□□ -1.62
PPARGC1A-204ENST00000506055 Q6ZRX8 168 aa4.93□□□□□ -1.62
PPARGC1A-204ENST00000506055 Q9BRP9 147 aa4.93□□□□□ -1.62
PPARGC1A-204ENST00000506055 TLX1NBP0CAT3 122 aa4.92□□□□□ -1.62
PPARGC1A-204ENST00000506055 ST20-AS1Q8NBB2 130 aa4.92□□□□□ -1.62
PPARGC1A-204ENST00000506055 OXTP01178 125 aa4.92□□□□□ -1.62
PPARGC1A-204ENST00000506055 KRTAP7-1Q8IUC3 87 aa4.92□□□□□ -1.62
PPARGC1A-204ENST00000506055 DHRS4-AS1Q9P1J3 65 aa4.92□□□□□ -1.62
PPARGC1A-204ENST00000506055 NBEAL1Q6ZS30 2694 aa4.91□□□□□ -1.62
PPARGC1A-204ENST00000506055 BPY2O14599 106 aa4.91□□□□□ -1.62
PPARGC1A-204ENST00000506055 RMI2Q96E14 147 aa4.91□□□□□ -1.62
PPARGC1A-204ENST00000506055 H7BZZ5 65 aa4.91□□□□□ -1.62
PPARGC1A-204ENST00000506055 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.62
PPARGC1A-204ENST00000506055 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.62
PPARGC1A-204ENST00000506055 MRPL55Q7Z7F7 128 aaKnown RBP4.9□□□□□ -1.62
PPARGC1A-204ENST00000506055 LYSTQ99698 3801 aa4.9□□□□□ -1.62
PPARGC1A-204ENST00000506055 PLA2G2DQ9UNK4 145 aa4.9□□□□□ -1.62
PPARGC1A-204ENST00000506055 PRYO14603 147 aa4.9□□□□□ -1.63
PPARGC1A-204ENST00000506055 ERC2-IT1O76042 136 aa4.9□□□□□ -1.63
PPARGC1A-204ENST00000506055 IGKV4-1P06312 121 aa4.9□□□□□ -1.63
PPARGC1A-204ENST00000506055 KLKP1Q107X0 134 aa4.9□□□□□ -1.63
PPARGC1A-204ENST00000506055 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
PPARGC1A-204ENST00000506055 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
PPARGC1A-204ENST00000506055 FUSP35637 526 aaKnown RBP eCLIP4.89□□□□□ -1.63
PPARGC1A-204ENST00000506055 UBE2BP63146 152 aa4.89□□□□□ -1.63
PPARGC1A-204ENST00000506055 COL6A5A8TX70 2615 aa4.89□□□□□ -1.63
PPARGC1A-204ENST00000506055 C1orf137Q5JT78 98 aa4.89□□□□□ -1.63
PPARGC1A-204ENST00000506055 IGLV5-37A0A075B6J1 123 aa4.88□□□□□ -1.63
PPARGC1A-204ENST00000506055 F8WEM9 126 aa4.88□□□□□ -1.63
PPARGC1A-204ENST00000506055 SPRR1AP35321 89 aa4.88□□□□□ -1.63
PPARGC1A-204ENST00000506055 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
PPARGC1A-204ENST00000506055 A0A1W2PNM2 257 aa4.88□□□□□ -1.63
PPARGC1A-204ENST00000506055 IGKV2-24A0A0C4DH68 120 aa4.87□□□□□ -1.63
PPARGC1A-204ENST00000506055 K7EIL1 84 aa4.87□□□□□ -1.63
PPARGC1A-204ENST00000506055 REG3GQ6UW15 175 aa4.87□□□□□ -1.63
PPARGC1A-204ENST00000506055 TMEM254Q8TBM7 123 aa4.86□□□□□ -1.63
PPARGC1A-204ENST00000506055 COL7A1Q02388 2944 aa4.85□□□□□ -1.63
PPARGC1A-204ENST00000506055 A0A0G2JQZ4 141 aa4.85□□□□□ -1.63
PPARGC1A-204ENST00000506055 A0A1W2PNN7 141 aa4.85□□□□□ -1.63
PPARGC1A-204ENST00000506055 TNP2Q05952 138 aa4.85□□□□□ -1.63
PPARGC1A-204ENST00000506055 C4orf26Q17RF5 130 aa4.85□□□□□ -1.63
PPARGC1A-204ENST00000506055 DNAH1Q9P2D7 4330 aa4.85□□□□□ -1.63
PPARGC1A-204ENST00000506055 PSCAO43653 123 aa4.85□□□□□ -1.63
PPARGC1A-204ENST00000506055 A0A096LNI7 61 aa4.84□□□□□ -1.63
PPARGC1A-204ENST00000506055 Q8NBF4 154 aa4.84□□□□□ -1.63
PPARGC1A-204ENST00000506055 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
PPARGC1A-204ENST00000506055 OCR1Q9BZK8 76 aa4.84□□□□□ -1.63
PPARGC1A-204ENST00000506055 CSMD3Q7Z407 3707 aa4.84□□□□□ -1.63
PPARGC1A-204ENST00000506055 PRLHP81277 87 aa4.84□□□□□ -1.63
PPARGC1A-204ENST00000506055 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 FAM30AQ9NZY2 134 aa4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 SERP1Q9Y6X1 66 aa4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 A0A1B0GW54 56 aa4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 NDUFC1O43677 76 aa4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 Q5XG85 94 aa4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 SRRM2Q9UQ35 2752 aaKnown RBP4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
PPARGC1A-204ENST00000506055 TENM2Q9NT68 2774 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 DNAH10Q8IVF4 4471 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 LINC00476Q8WZB0 136 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 SPRR4Q96PI1 79 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 HIGD2AQ9BW72 106 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 C16orf90A8MZG2 172 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 DEFB116Q30KQ4 102 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 HRCT1Q6UXD1 115 aa4.82□□□□□ -1.64
PPARGC1A-204ENST00000506055 EPM2AB3EWF7 344 aa4.81□□□□□ -1.64
PPARGC1A-204ENST00000506055 UBE2DNLQ8IWF7 75 aa4.81□□□□□ -1.64
PPARGC1A-204ENST00000506055 MGAM2Q2M2H8 2515 aa4.81□□□□□ -1.64
PPARGC1A-204ENST00000506055 K7EQZ3 153 aa4.81□□□□□ -1.64
PPARGC1A-204ENST00000506055 DSCR10P59022 87 aa4.81□□□□□ -1.64
PPARGC1A-204ENST00000506055 C5orf47Q569G3 176 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms