RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 LINC00470Q9BZP3 86 aa-1.76□□□□□ -2.69
SMN2-205ENST00000505346 ANKRD36A6QL64 1941 aa-1.76□□□□□ -2.69
SMN2-205ENST00000505346 ALKQ9UM73 1620 aa-1.77□□□□□ -2.69
SMN2-205ENST00000505346 LCE6AA0A183 80 aa-1.77□□□□□ -2.69
SMN2-205ENST00000505346 A0A1B0GWA3 101 aa-1.77□□□□□ -2.69
SMN2-205ENST00000505346 OOSP1A8MZH6 123 aa-1.77□□□□□ -2.69
SMN2-205ENST00000505346 H7BZZ5 65 aa-1.77□□□□□ -2.69
SMN2-205ENST00000505346 APOC2P02655 101 aa-1.77□□□□□ -2.69
SMN2-205ENST00000505346 ARL11Q969Q4 196 aa-1.77□□□□□ -2.69
SMN2-205ENST00000505346 A0A1B0GU69 56 aa-1.78□□□□□ -2.69
SMN2-205ENST00000505346 TNP1P09430 55 aa-1.78□□□□□ -2.69
SMN2-205ENST00000505346 TOP2BQ02880 1626 aa-1.78□□□□□ -2.69
SMN2-205ENST00000505346 ABCC10Q5T3U5 1492 aa-1.79□□□□□ -2.7
SMN2-205ENST00000505346 LOC105371267A0A1B0GV96 52 aa-1.79□□□□□ -2.7
SMN2-205ENST00000505346 Q0VG73 95 aa-1.79□□□□□ -2.7
SMN2-205ENST00000505346 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.79□□□□□ -2.7
SMN2-205ENST00000505346 MANBALQ9NQG1 85 aa-1.79□□□□□ -2.7
SMN2-205ENST00000505346 UNC80Q8N2C7 3258 aa-1.8□□□□□ -2.7
SMN2-205ENST00000505346 LINC01546A6NGU7 62 aa-1.8□□□□□ -2.7
SMN2-205ENST00000505346 GNG11P61952 73 aa-1.8□□□□□ -2.7
SMN2-205ENST00000505346 SELENOWP63302 87 aa-1.8□□□□□ -2.7
SMN2-205ENST00000505346 DIP2CQ9Y2E4 1556 aa-1.81□□□□□ -2.7
SMN2-205ENST00000505346 NCOA3Q9Y6Q9 1424 aa-1.81□□□□□ -2.7
SMN2-205ENST00000505346 C9orf153Q5TBE3 101 aa-1.81□□□□□ -2.7
SMN2-205ENST00000505346 PP6455Q8WZ26 134 aa-1.81□□□□□ -2.7
SMN2-205ENST00000505346 PRDM15P57071 1507 aaPredicted RBP-1.81□□□□□ -2.7
SMN2-205ENST00000505346 CLIP1P30622 1438 aa-1.82□□□□□ -2.7
SMN2-205ENST00000505346 UBE2L5PA0A1B0GUS4 154 aa-1.82□□□□□ -2.7
SMN2-205ENST00000505346 TRAPPC2P0DI81 140 aa-1.82□□□□□ -2.7
SMN2-205ENST00000505346 TRAPPC2BP0DI82 140 aa-1.82□□□□□ -2.7
SMN2-205ENST00000505346 UBE2L3P68036 154 aaKnown RBP-1.82□□□□□ -2.7
SMN2-205ENST00000505346 DEFB136Q30KP8 78 aa-1.82□□□□□ -2.7
SMN2-205ENST00000505346 PRO3102Q9H379 93 aa-1.82□□□□□ -2.7
SMN2-205ENST00000505346 MMP24-AS1A0A0U1RRL7 71 aa-1.83□□□□□ -2.7
SMN2-205ENST00000505346 A8MTW9 85 aa-1.83□□□□□ -2.7
SMN2-205ENST00000505346 C6orf201Q7Z4U5 140 aa-1.83□□□□□ -2.7
SMN2-205ENST00000505346 PAIP2BQ9ULR5 123 aaKnown RBP-1.83□□□□□ -2.7
SMN2-205ENST00000505346 KIAA1551Q9HCM1 1747 aa-1.83□□□□□ -2.7
SMN2-205ENST00000505346 SAA2P0DJI9 122 aaPredicted RBP-1.84□□□□□ -2.7
SMN2-205ENST00000505346 SNCAP37840 140 aa-1.84□□□□□ -2.7
SMN2-205ENST00000505346 DPH3P1Q9H4G8 78 aa-1.84□□□□□ -2.7
SMN2-205ENST00000505346 TIAM2Q8IVF5 1701 aa-1.84□□□□□ -2.7
SMN2-205ENST00000505346 MRC2Q9UBG0 1479 aa-1.84□□□□□ -2.7
SMN2-205ENST00000505346 CUL7Q14999 1698 aa-1.84□□□□□ -2.7
SMN2-205ENST00000505346 EDC4Q6P2E9 1401 aaKnown RBP-1.84□□□□□ -2.7
SMN2-205ENST00000505346 SCAPERQ9BY12 1400 aa-1.84□□□□□ -2.7
SMN2-205ENST00000505346 COX6CP09669 75 aa-1.85□□□□□ -2.71
SMN2-205ENST00000505346 NMSQ5H8A3 153 aa-1.85□□□□□ -2.71
SMN2-205ENST00000505346 KTN1Q86UP2 1357 aaKnown RBP-1.85□□□□□ -2.71
SMN2-205ENST00000505346 A2ML1A8K2U0 1454 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 SPTY2D1-AS1A0A0U1RR47 76 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 F6UZH7 168 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 HSD52Q0P140 79 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 C12orf57Q99622 126 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 PRO1854Q9UHT4 67 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 UBE2D4Q9Y2X8 147 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 NAIPQ13075 1403 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 DNAH12Q6ZR08 3092 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 CENPFP49454 3210 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 LRRC37AA6NMS7 1700 aa-1.86□□□□□ -2.71
SMN2-205ENST00000505346 ASPMQ8IZT6 3477 aa-1.88□□□□□ -2.71
SMN2-205ENST00000505346 TARBP1Q13395 1621 aaKnown RBP-1.88□□□□□ -2.71
SMN2-205ENST00000505346 CUX1P39880 1505 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 K7EP13 123 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 NDUFA2O43678 99 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 NDUFA3O95167 84 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 AKAIN1P0CW23 69 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 ATP5EP56381 51 aaPredicted RBP-1.89□□□□□ -2.71
SMN2-205ENST00000505346 COX6B2Q6YFQ2 88 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 DEFB107AQ8IZN7 70 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 DEFB106AQ8N104 65 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 PSENENQ9NZ42 101 aa-1.89□□□□□ -2.71
SMN2-205ENST00000505346 MT-ATP8P03928 68 aa-1.9□□□□□ -2.71
SMN2-205ENST00000505346 TTTY10Q9BZA0 68 aa-1.9□□□□□ -2.71
SMN2-205ENST00000505346 SCN11AQ9UI33 1791 aa-1.9□□□□□ -2.71
SMN2-205ENST00000505346 TRBV7-7A0A0K0K1E9 115 aa-1.91□□□□□ -2.72
SMN2-205ENST00000505346 SPART-AS1P0CW21 52 aa-1.91□□□□□ -2.72
SMN2-205ENST00000505346 KRTAP19-2Q3LHN2 52 aa-1.91□□□□□ -2.72
SMN2-205ENST00000505346 SMARCA2P51531 1590 aa-1.91□□□□□ -2.72
SMN2-205ENST00000505346 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.91□□□□□ -2.72
SMN2-205ENST00000505346 RGPD2P0DJD1 1756 aa-1.91□□□□□ -2.72
SMN2-205ENST00000505346 ATP10BO94823 1461 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 A0A0G2JND7 137 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 C7orf77A4D0Y5 90 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 NAP1L6A6NFF2 107 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 FAM24AA6NFZ4 105 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 F8WEM9 126 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 M0QZ58 72 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 ARMS2P0C7Q2 107 aa-1.92□□□□□ -2.72
SMN2-205ENST00000505346 IGLV5-48A0A075B6I7 105 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 CRYM-AS1A6NIL9 109 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 H0Y9P7 68 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 CCDC58Q4VC31 144 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 LEAP2Q969E1 77 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 ANKRD36CQ5JPF3 1778 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 SHPRHQ149N8 1683 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 ZNF831Q5JPB2 1677 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.93□□□□□ -2.72
SMN2-205ENST00000505346 PLXNC1O60486 1568 aa-1.93□□□□□ -2.72
SMN2-205ENST00000505346 ATP7BP35670 1465 aa-1.94□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms