RNA–Protein interactions for RNA: ENST00000505199.5

SNCA-208, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-208ENST00000505199 TRAV23DV6A0A075B6W5 121 aa7.57□□□□□ -1.2
SNCA-208ENST00000505199 HIST1H4GQ99525 98 aa7.57□□□□□ -1.2
SNCA-208ENST00000505199 PCLOQ9Y6V0 5065 aa7.56□□□□□ -1.2
SNCA-208ENST00000505199 TRBV7-6A0A0J9YX20 115 aa7.56□□□□□ -1.2
SNCA-208ENST00000505199 ZNF73O43830 326 aaPredicted RBP7.56□□□□□ -1.2
SNCA-208ENST00000505199 HINT1P49773 126 aaPredicted RBP7.56□□□□□ -1.2
SNCA-208ENST00000505199 FAM19A1Q7Z5A9 133 aa7.56□□□□□ -1.2
SNCA-208ENST00000505199 LINC01600Q96MT4 127 aa7.56□□□□□ -1.2
SNCA-208ENST00000505199 ETDCA0A1B0GVM5 59 aa7.55□□□□□ -1.2
SNCA-208ENST00000505199 C2orf91Q6ZV80 131 aa7.55□□□□□ -1.2
SNCA-208ENST00000505199 UQCR10Q9UDW1 63 aa7.55□□□□□ -1.2
SNCA-208ENST00000505199 Q6ZRX8 168 aa7.54□□□□□ -1.2
SNCA-208ENST00000505199 OR13C6PQ8NH95 151 aa7.54□□□□□ -1.2
SNCA-208ENST00000505199 A4D1N5 150 aa7.53□□□□□ -1.2
SNCA-208ENST00000505199 ABCA13Q86UQ4 5058 aa7.52□□□□□ -1.2
SNCA-208ENST00000505199 B5MCH6 92 aa7.52□□□□□ -1.21
SNCA-208ENST00000505199 PRLHP81277 87 aa7.52□□□□□ -1.21
SNCA-208ENST00000505199 ZNF706Q9Y5V0 76 aaPredicted RBP7.52□□□□□ -1.21
SNCA-208ENST00000505199 LOC105371267A0A1B0GV96 52 aa7.51□□□□□ -1.21
SNCA-208ENST00000505199 A6NDN8 102 aa7.51□□□□□ -1.21
SNCA-208ENST00000505199 RPL13AP40429 203 aaKnown RBP7.51□□□□□ -1.21
SNCA-208ENST00000505199 A0A0B4J2C4 111 aa7.5□□□□□ -1.21
SNCA-208ENST00000505199 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
SNCA-208ENST00000505199 HSD52Q0P140 79 aa7.5□□□□□ -1.21
SNCA-208ENST00000505199 FAM229BQ4G0N7 80 aa7.5□□□□□ -1.21
SNCA-208ENST00000505199 CEND1Q8N111 149 aa7.5□□□□□ -1.21
SNCA-208ENST00000505199 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
SNCA-208ENST00000505199 ELOF1P60002 83 aaKnown RBP7.49□□□□□ -1.21
SNCA-208ENST00000505199 DHRS4-AS1Q9P1J3 65 aa7.49□□□□□ -1.21
SNCA-208ENST00000505199 DMBT1Q9UGM3 2413 aaPredicted RBP7.49□□□□□ -1.21
SNCA-208ENST00000505199 J3QL48 77 aa7.48□□□□□ -1.21
SNCA-208ENST00000505199 HIGD2AQ9BW72 106 aa7.48□□□□□ -1.21
SNCA-208ENST00000505199 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
SNCA-208ENST00000505199 C6orf99Q4VX62 202 aa7.47□□□□□ -1.21
SNCA-208ENST00000505199 SMCR5Q8TEV8 140 aa7.47□□□□□ -1.21
SNCA-208ENST00000505199 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
SNCA-208ENST00000505199 VAMP3Q15836 100 aa7.46□□□□□ -1.22
SNCA-208ENST00000505199 Q9BRP9 147 aa7.46□□□□□ -1.22
SNCA-208ENST00000505199 NHP2Q9NX24 153 aaKnown RBP7.46□□□□□ -1.22
SNCA-208ENST00000505199 PKHD1L1Q86WI1 4243 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 TSTD3H0UI37 97 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 CFC1BP0CG36 223 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 CFC1P0CG37 223 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 MT1HL1P0DM35 61 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 CRYGAP11844 174 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 COX7BP24311 80 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 BVES-AS1Q5T3Y7 98 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 SMIM11BQ8TCY0 68 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 RAB37Q96AX2 223 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 SPRR4Q96PI1 79 aa7.45□□□□□ -1.22
SNCA-208ENST00000505199 LINC00483Q53H64 154 aa7.44□□□□□ -1.22
SNCA-208ENST00000505199 C12orf57Q99622 126 aa7.43□□□□□ -1.22
SNCA-208ENST00000505199 PRO1854Q9UHT4 67 aa7.43□□□□□ -1.22
SNCA-208ENST00000505199 FXYD2P54710 66 aa7.41□□□□□ -1.22
SNCA-208ENST00000505199 H0YGX0 51 aa7.4□□□□□ -1.22
SNCA-208ENST00000505199 M0R143 59 aa7.4□□□□□ -1.22
SNCA-208ENST00000505199 SLC25A20O43772 301 aa7.4□□□□□ -1.22
SNCA-208ENST00000505199 SPRR1BP22528 89 aa7.4□□□□□ -1.22
SNCA-208ENST00000505199 SNCGO76070 127 aa7.39□□□□□ -1.23
SNCA-208ENST00000505199 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
SNCA-208ENST00000505199 A0A087X002 238 aa7.38□□□□□ -1.23
SNCA-208ENST00000505199 ERC2-IT1O76042 136 aa7.38□□□□□ -1.23
SNCA-208ENST00000505199 PCP4P48539 62 aa7.38□□□□□ -1.23
SNCA-208ENST00000505199 PRO1933Q9H354 126 aa7.38□□□□□ -1.23
SNCA-208ENST00000505199 LRP1Q07954 4544 aaKnown RBP7.38□□□□□ -1.23
SNCA-208ENST00000505199 A0A1B0GX51 115 aa7.37□□□□□ -1.23
SNCA-208ENST00000505199 LINC00575Q6W349 94 aa7.37□□□□□ -1.23
SNCA-208ENST00000505199 IGLV5-48A0A075B6I7 105 aa7.36□□□□□ -1.23
SNCA-208ENST00000505199 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
SNCA-208ENST00000505199 PPDPFLQ8WWR9 84 aa7.36□□□□□ -1.23
SNCA-208ENST00000505199 TEX49A0A1B0GTD5 131 aa7.35□□□□□ -1.23
SNCA-208ENST00000505199 hADV29S1A0JD25 119 aa7.35□□□□□ -1.23
SNCA-208ENST00000505199 GHRHP01286 108 aa7.35□□□□□ -1.23
SNCA-208ENST00000505199 GAGE2AQ6NT46 116 aa7.35□□□□□ -1.23
SNCA-208ENST00000505199 COX6CP09669 75 aa7.34□□□□□ -1.23
SNCA-208ENST00000505199 Q1RN00 199 aa7.34□□□□□ -1.23
SNCA-208ENST00000505199 KRTAP13-2Q52LG2 175 aa7.34□□□□□ -1.23
SNCA-208ENST00000505199 OCIAD2Q56VL3 154 aa7.34□□□□□ -1.23
SNCA-208ENST00000505199 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.34□□□□□ -1.23
SNCA-208ENST00000505199 SSBP3-AS1Q7Z2R9 100 aa7.34□□□□□ -1.23
SNCA-208ENST00000505199 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
SNCA-208ENST00000505199 SPAG11AQ6PDA7 123 aa7.33□□□□□ -1.24
SNCA-208ENST00000505199 H7C2G1 150 aa7.32□□□□□ -1.24
SNCA-208ENST00000505199 ANAPC11Q9NYG5 84 aa7.32□□□□□ -1.24
SNCA-208ENST00000505199 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
SNCA-208ENST00000505199 ST20-AS1Q8NBB2 130 aa7.31□□□□□ -1.24
SNCA-208ENST00000505199 H3BQ85 93 aa7.3□□□□□ -1.24
SNCA-208ENST00000505199 RPS29P62273 56 aaKnown RBP7.3□□□□□ -1.24
SNCA-208ENST00000505199 TNXBP22105 4242 aa7.29□□□□□ -1.24
SNCA-208ENST00000505199 K7ERJ3 54 aa7.29□□□□□ -1.24
SNCA-208ENST00000505199 TRIAP1O43715 76 aa7.29□□□□□ -1.24
SNCA-208ENST00000505199 TSPAN13O95857 204 aa7.29□□□□□ -1.24
SNCA-208ENST00000505199 LINC01547P58512 204 aaPredicted RBP7.29□□□□□ -1.24
SNCA-208ENST00000505199 Q6ZQY7 126 aa7.29□□□□□ -1.24
SNCA-208ENST00000505199 LINC00304Q8N9R0 145 aa7.29□□□□□ -1.24
SNCA-208ENST00000505199 Q8NBF4 154 aa7.29□□□□□ -1.24
SNCA-208ENST00000505199 PCP4L1A6NKN8 68 aa7.28□□□□□ -1.24
SNCA-208ENST00000505199 SPINK1P00995 79 aa7.27□□□□□ -1.25
SNCA-208ENST00000505199 PSMB2P49721 201 aa7.27□□□□□ -1.25
SNCA-208ENST00000505199 C3orf22Q8N5N4 141 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms