RNA–Protein interactions for RNA: ENST00000504458.1

SERF1A-204, Transcript of small EDRK-rich factor 1A, human

TSL 4 BASIC

Gene SERF1A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERF1A-204	ENST00000504458	C6orf223	Q8N319	242 aa		4.13	□□□□□ -1.75
SERF1A-204	ENST00000504458	TENM2	Q9NT68	2774 aa		4.13	□□□□□ -1.75
SERF1A-204	ENST00000504458	CRYGA	P11844	174 aa		4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	RBM3	P98179	157 aa	Known RBP	4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	EGFEM1P	Q0D2K5	195 aa		4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	C2orf48	Q96LS8	159 aa		4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	UBL5	Q9BZL1	73 aa		4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	SS18L2	Q9UHA2	77 aa		4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	KLK12	Q9UKR0	248 aa		4.12	□□□□□ -1.75
SERF1A-204	ENST00000504458	DEFB4A	O15263	64 aa		4.11	□□□□□ -1.75
SERF1A-204	ENST00000504458	PRR3	P79522	188 aa	Known RBP	4.11	□□□□□ -1.75
SERF1A-204	ENST00000504458	C9orf116	Q5BN46	136 aa	Predicted RBP	4.11	□□□□□ -1.75
SERF1A-204	ENST00000504458	C10orf25	Q5T742	122 aa		4.11	□□□□□ -1.75
SERF1A-204	ENST00000504458	C9orf153	Q5TBE3	101 aa		4.11	□□□□□ -1.75
SERF1A-204	ENST00000504458	DIRC1	Q969H9	104 aa		4.11	□□□□□ -1.75
SERF1A-204	ENST00000504458	PRKDC	P78527	4128 aa	Known RBP	4.1	□□□□□ -1.75
SERF1A-204	ENST00000504458	TRAV23DV6	A0A075B6W5	121 aa		4.1	□□□□□ -1.75
SERF1A-204	ENST00000504458	HTN3	P15516	51 aa		4.1	□□□□□ -1.75
SERF1A-204	ENST00000504458	KRTAP26-1	Q6PEX3	210 aa		4.1	□□□□□ -1.75
SERF1A-204	ENST00000504458		Q6ZQT0	140 aa		4.1	□□□□□ -1.75
SERF1A-204	ENST00000504458	SERP2	Q8N6R1	65 aa		4.1	□□□□□ -1.75
SERF1A-204	ENST00000504458	C6orf48	Q9UBA6	75 aa		4.1	□□□□□ -1.75
SERF1A-204	ENST00000504458	IGKV3D-7	A0A0C4DH55	119 aa		4.09	□□□□□ -1.75
SERF1A-204	ENST00000504458		M0R378	163 aa		4.09	□□□□□ -1.75
SERF1A-204	ENST00000504458	COX7B	P24311	80 aa		4.09	□□□□□ -1.75
SERF1A-204	ENST00000504458	LINC01556	Q5JQF7	62 aa		4.09	□□□□□ -1.75
SERF1A-204	ENST00000504458		Q8NDZ9	215 aa		4.09	□□□□□ -1.75
SERF1A-204	ENST00000504458	CAMK2N2	Q96S95	79 aa		4.09	□□□□□ -1.75
SERF1A-204	ENST00000504458	DSCR8	Q96T75	97 aa		4.09	□□□□□ -1.75
SERF1A-204	ENST00000504458	USP17L23	D6RBM5	183 aa		4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	NDUFC2-KCTD14	E9PQ53	114 aa		4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	ZNF73	O43830	326 aa	Predicted RBP	4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	VPREB1	P12018	145 aa		4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	ELOF1	P60002	83 aa	Known RBP	4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	RPS28	P62857	69 aa	Known RBP	4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	SMIM20	Q8N5G0	67 aa		4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	LAMTOR3	Q9UHA4	124 aa		4.08	□□□□□ -1.76
SERF1A-204	ENST00000504458	CXCL6	P80162	114 aa		4.07	□□□□□ -1.76
SERF1A-204	ENST00000504458		Q6ZQY7	126 aa		4.07	□□□□□ -1.76
SERF1A-204	ENST00000504458	TRBV7-4	A0A0J9YYF1	115 aa		4.06	□□□□□ -1.76
SERF1A-204	ENST00000504458		A0A1B0GW54	56 aa		4.06	□□□□□ -1.76
SERF1A-204	ENST00000504458	LY6G6C	O95867	125 aa		4.06	□□□□□ -1.76
SERF1A-204	ENST00000504458	TLX1NB	P0CAT3	122 aa		4.06	□□□□□ -1.76
SERF1A-204	ENST00000504458	TMEM258	P61165	79 aa		4.06	□□□□□ -1.76
SERF1A-204	ENST00000504458	WFDC10B	Q8IUB3	73 aa		4.06	□□□□□ -1.76
SERF1A-204	ENST00000504458	C15orf56	Q8N910	161 aa		4.06	□□□□□ -1.76
SERF1A-204	ENST00000504458	DNAH10OS	P0CZ25	163 aa		4.05	□□□□□ -1.76
SERF1A-204	ENST00000504458	ESRG	Q1W209	222 aa		4.05	□□□□□ -1.76
SERF1A-204	ENST00000504458		Q6ZRU5	148 aa		4.05	□□□□□ -1.76
SERF1A-204	ENST00000504458		Q6ZTC4	211 aa		4.05	□□□□□ -1.76
SERF1A-204	ENST00000504458	UPK3B	Q9BT76	320 aa		4.05	□□□□□ -1.76
SERF1A-204	ENST00000504458	IGLV5-37	A0A075B6J1	123 aa		4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458	DEFB131B	A0A096LNP1	70 aa		4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458	LOC107984640	A0A0U1RRK4	108 aa		4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458	SYCN	Q0VAF6	134 aa		4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458		Q6ZVQ6	151 aa		4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458	KCNQ1DN	Q9H478	68 aa		4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458	XAGE1A	Q9HD64	81 aa		4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.04	□□□□□ -1.76
SERF1A-204	ENST00000504458	TRAV7	A0A075B6U4	112 aa		4.03	□□□□□ -1.76
SERF1A-204	ENST00000504458		A0A087WVE0	104 aa		4.03	□□□□□ -1.76
SERF1A-204	ENST00000504458		J3KT08	172 aa		4.03	□□□□□ -1.76
SERF1A-204	ENST00000504458	LINC01547	P58512	204 aa	Predicted RBP	4.03	□□□□□ -1.76
SERF1A-204	ENST00000504458	HIGD2B	Q4VC39	106 aa		4.03	□□□□□ -1.76
SERF1A-204	ENST00000504458	C11orf45	Q8TAV5	145 aa		4.03	□□□□□ -1.76
SERF1A-204	ENST00000504458	RMI2	Q96E14	147 aa		4.03	□□□□□ -1.76
SERF1A-204	ENST00000504458	STAB2	Q8WWQ8	2551 aa		4.03	□□□□□ -1.77
SERF1A-204	ENST00000504458	TRAV10	A0A0B4J240	114 aa		4.02	□□□□□ -1.77
SERF1A-204	ENST00000504458	FAM19A1	Q7Z5A9	133 aa		4.02	□□□□□ -1.77
SERF1A-204	ENST00000504458		Q8N9P0	234 aa	Predicted RBP	4.02	□□□□□ -1.77
SERF1A-204	ENST00000504458	DHRS4-AS1	Q9P1J3	65 aa		4.02	□□□□□ -1.77
SERF1A-204	ENST00000504458	RYR3	Q15413	4870 aa		4.01	□□□□□ -1.77
SERF1A-204	ENST00000504458	IGKV2D-24	A0A075B6R9	120 aa		4.01	□□□□□ -1.77
SERF1A-204	ENST00000504458	PRY	O14603	147 aa		4.01	□□□□□ -1.77
SERF1A-204	ENST00000504458	HAMP	P81172	84 aa		4.01	□□□□□ -1.77
SERF1A-204	ENST00000504458		Q6ZRP5	223 aa		4.01	□□□□□ -1.77
SERF1A-204	ENST00000504458	NKAPP1	Q8N9T2	125 aa		4.01	□□□□□ -1.77
SERF1A-204	ENST00000504458	RETN	Q9HD89	108 aa		4.01	□□□□□ -1.77
SERF1A-204	ENST00000504458	IGLV5-48	A0A075B6I7	105 aa		4	□□□□□ -1.77
SERF1A-204	ENST00000504458	IGKV2-30	P06310	120 aa		4	□□□□□ -1.77
SERF1A-204	ENST00000504458	SPRR1A	P35321	89 aa		4	□□□□□ -1.77
SERF1A-204	ENST00000504458	NDUFC1	O43677	76 aa		3.99	□□□□□ -1.77
SERF1A-204	ENST00000504458	ERC2-IT1	O76042	136 aa		3.99	□□□□□ -1.77
SERF1A-204	ENST00000504458	KLKP1	Q107X0	134 aa		3.99	□□□□□ -1.77
SERF1A-204	ENST00000504458	C7orf33	Q8WU49	177 aa		3.99	□□□□□ -1.77
SERF1A-204	ENST00000504458	DPH3	Q96FX2	82 aa		3.99	□□□□□ -1.77
SERF1A-204	ENST00000504458	TM2D3	Q9BRN9	247 aa		3.99	□□□□□ -1.77
SERF1A-204	ENST00000504458	DNAH3	Q8TD57	4116 aa		3.98	□□□□□ -1.77
SERF1A-204	ENST00000504458	IGLV1-50	A0A075B6I6	118 aa		3.98	□□□□□ -1.77
SERF1A-204	ENST00000504458	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	3.98	□□□□□ -1.77
SERF1A-204	ENST00000504458		M0R2N4	97 aa		3.98	□□□□□ -1.77
SERF1A-204	ENST00000504458		Q6ZRX8	168 aa		3.98	□□□□□ -1.77
SERF1A-204	ENST00000504458	KRTAP9-8	Q9BYQ0	159 aa		3.98	□□□□□ -1.77
SERF1A-204	ENST00000504458	BIRC6	Q9NR09	4857 aa		3.98	□□□□□ -1.77
SERF1A-204	ENST00000504458	COL7A1	Q02388	2944 aa		3.97	□□□□□ -1.77
SERF1A-204	ENST00000504458	NREP	Q16612	68 aa		3.97	□□□□□ -1.77
SERF1A-204	ENST00000504458	LINC00588	Q9Y4M8	146 aa		3.97	□□□□□ -1.77
SERF1A-204	ENST00000504458	CMYA5	Q8N3K9	4069 aa		3.96	□□□□□ -1.78
SERF1A-204	ENST00000504458	ETDC	A0A1B0GVM5	59 aa		3.96	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms