RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 Q75L30 129 aa6.19□□□□□ -1.42
LSM6-204ENST00000504181 KMT2DO14686 5537 aa6.18□□□□□ -1.42
LSM6-204ENST00000504181 NXT2Q9NPJ8 142 aaKnown RBP6.18□□□□□ -1.42
LSM6-204ENST00000504181 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
LSM6-204ENST00000504181 DDTP30046 118 aa6.17□□□□□ -1.42
LSM6-204ENST00000504181 JOSD1Q15040 202 aaPredicted RBP6.17□□□□□ -1.42
LSM6-204ENST00000504181 ALKAL2Q6UX46 152 aa6.17□□□□□ -1.42
LSM6-204ENST00000504181 ATP6V1G1O75348 118 aa6.16□□□□□ -1.42
LSM6-204ENST00000504181 SRP19P09132 144 aaKnown RBP6.16□□□□□ -1.42
LSM6-204ENST00000504181 SMIM13P0DJ93 91 aa6.16□□□□□ -1.42
LSM6-204ENST00000504181 Q1RN00 199 aa6.16□□□□□ -1.42
LSM6-204ENST00000504181 SFTA2Q6UW10 78 aa6.16□□□□□ -1.42
LSM6-204ENST00000504181 SLC25A34Q6PIV7 304 aa6.15□□□□□ -1.42
LSM6-204ENST00000504181 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.42
LSM6-204ENST00000504181 IGLC3P0DOY3 106 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 SPRR1BP22528 89 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 C6orf99Q4VX62 202 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 C10orf91Q5T1B1 145 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 ATP5L2Q7Z4Y8 100 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 OBSCN-AS1Q96MR7 158 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 PRO1933Q9H354 126 aa6.14□□□□□ -1.43
LSM6-204ENST00000504181 PCP2Q8IVA1 136 aa6.13□□□□□ -1.43
LSM6-204ENST00000504181 C5orf52A6NGY3 159 aa6.12□□□□□ -1.43
LSM6-204ENST00000504181 A0A0G2JQZ4 141 aa6.11□□□□□ -1.43
LSM6-204ENST00000504181 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
LSM6-204ENST00000504181 BLOC1S1P78537 153 aa6.11□□□□□ -1.43
LSM6-204ENST00000504181 MEIG1Q5JSS6 88 aa6.11□□□□□ -1.43
LSM6-204ENST00000504181 NAT8Q9UHE5 227 aa6.11□□□□□ -1.43
LSM6-204ENST00000504181 C9orf118A6NHY6 69 aa6.1□□□□□ -1.43
LSM6-204ENST00000504181 SLC51BQ86UW2 128 aa6.1□□□□□ -1.43
LSM6-204ENST00000504181 Q8N9P0 234 aaPredicted RBP6.1□□□□□ -1.43
LSM6-204ENST00000504181 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
LSM6-204ENST00000504181 NDUFA6P56556 154 aa6.09□□□□□ -1.43
LSM6-204ENST00000504181 TRAV23DV6A0A075B6W5 121 aa6.08□□□□□ -1.44
LSM6-204ENST00000504181 TMEM170BQ5T4T1 132 aa6.08□□□□□ -1.44
LSM6-204ENST00000504181 AKR1D1P51857 326 aa6.07□□□□□ -1.44
LSM6-204ENST00000504181 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
LSM6-204ENST00000504181 LINC01549A6NIU2 74 aa6.06□□□□□ -1.44
LSM6-204ENST00000504181 ZNF73O43830 326 aaPredicted RBP6.06□□□□□ -1.44
LSM6-204ENST00000504181 S100A7L2Q5SY68 101 aa6.06□□□□□ -1.44
LSM6-204ENST00000504181 C11orf86A6NJI1 115 aa6.05□□□□□ -1.44
LSM6-204ENST00000504181 TCL1BO95988 128 aa6.05□□□□□ -1.44
LSM6-204ENST00000504181 FA2HQ7L5A8 372 aa6.05□□□□□ -1.44
LSM6-204ENST00000504181 Q96NJ1 140 aa6.05□□□□□ -1.44
LSM6-204ENST00000504181 LOC107984156A0A0G2JMH3 177 aa6.04□□□□□ -1.44
LSM6-204ENST00000504181 ARL17AQ8IVW1 177 aa6.04□□□□□ -1.44
LSM6-204ENST00000504181 DEFB105AQ8NG35 78 aa6.04□□□□□ -1.44
LSM6-204ENST00000504181 RBM12B-AS1Q9P1G2 102 aa6.04□□□□□ -1.44
LSM6-204ENST00000504181 Q6ZVH6 145 aa6.03□□□□□ -1.44
LSM6-204ENST00000504181 SPANXB1Q9NS25 103 aaPredicted RBP6.03□□□□□ -1.44
LSM6-204ENST00000504181 TAL2Q16559 108 aa6.02□□□□□ -1.45
LSM6-204ENST00000504181 A6NN06 94 aa6.01□□□□□ -1.45
LSM6-204ENST00000504181 C9JQL5 133 aa6.01□□□□□ -1.45
LSM6-204ENST00000504181 HINT1P49773 126 aaPredicted RBP6□□□□□ -1.45
LSM6-204ENST00000504181 MPLKIPQ8TAP9 179 aa6□□□□□ -1.45
LSM6-204ENST00000504181 LINC01546A6NGU7 62 aa5.99□□□□□ -1.45
LSM6-204ENST00000504181 IGFL1Q6UW32 110 aa5.99□□□□□ -1.45
LSM6-204ENST00000504181 MAP1LC3CQ9BXW4 147 aa5.99□□□□□ -1.45
LSM6-204ENST00000504181 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
LSM6-204ENST00000504181 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
LSM6-204ENST00000504181 DHRS4-AS1Q9P1J3 65 aa5.99□□□□□ -1.45
LSM6-204ENST00000504181 HRES1P13985 223 aa5.98□□□□□ -1.45
LSM6-204ENST00000504181 HERV-K104P63124 156 aa5.98□□□□□ -1.45
LSM6-204ENST00000504181 RGS21Q2M5E4 152 aa5.98□□□□□ -1.45
LSM6-204ENST00000504181 TMEM223A0PJW6 202 aa5.97□□□□□ -1.45
LSM6-204ENST00000504181 A8MUU9 505 aa5.97□□□□□ -1.45
LSM6-204ENST00000504181 TEX49A0A1B0GTD5 131 aa5.96□□□□□ -1.46
LSM6-204ENST00000504181 A8MWP4 228 aa5.96□□□□□ -1.46
LSM6-204ENST00000504181 LINC00587B1AMM8 73 aa5.96□□□□□ -1.46
LSM6-204ENST00000504181 KRTAP16-1A8MUX0 517 aa5.95□□□□□ -1.46
LSM6-204ENST00000504181 BAGE3Q86Y29 109 aa5.95□□□□□ -1.46
LSM6-204ENST00000504181 MIEN1Q9BRT3 115 aa5.95□□□□□ -1.46
LSM6-204ENST00000504181 SMCO4Q9NRQ5 59 aa5.95□□□□□ -1.46
LSM6-204ENST00000504181 NDUFC2O95298 119 aa5.93□□□□□ -1.46
LSM6-204ENST00000504181 HBDP02042 147 aa5.93□□□□□ -1.46
LSM6-204ENST00000504181 A0A096LNJ9 63 aa5.92□□□□□ -1.46
LSM6-204ENST00000504181 COMMD7Q86VX2 200 aa5.92□□□□□ -1.46
LSM6-204ENST00000504181 MYMXA0A1B0GTQ4 84 aa5.91□□□□□ -1.46
LSM6-204ENST00000504181 SPRR2EP22531 72 aa5.9□□□□□ -1.46
LSM6-204ENST00000504181 SPRR2BP35325 72 aa5.9□□□□□ -1.46
LSM6-204ENST00000504181 SPRR2AP35326 72 aa5.9□□□□□ -1.46
LSM6-204ENST00000504181 NPC2P61916 151 aa5.9□□□□□ -1.46
LSM6-204ENST00000504181 ELOF1P60002 83 aaKnown RBP5.89□□□□□ -1.47
LSM6-204ENST00000504181 CBY1Q9Y3M2 126 aa5.89□□□□□ -1.47
LSM6-204ENST00000504181 COX7BP24311 80 aa5.88□□□□□ -1.47
LSM6-204ENST00000504181 PEA15Q15121 130 aa5.88□□□□□ -1.47
LSM6-204ENST00000504181 PMCHL1Q16048 86 aa5.87□□□□□ -1.47
LSM6-204ENST00000504181 SOSTDC1Q6X4U4 206 aa5.87□□□□□ -1.47
LSM6-204ENST00000504181 NOTCH2NLQ7Z3S9 236 aa5.87□□□□□ -1.47
LSM6-204ENST00000504181 TCTE3Q8IZS6 198 aa5.87□□□□□ -1.47
LSM6-204ENST00000504181 OR13C6PQ8NH95 151 aa5.87□□□□□ -1.47
LSM6-204ENST00000504181 RPS10P5Q9NQ39 176 aa5.87□□□□□ -1.47
LSM6-204ENST00000504181 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
LSM6-204ENST00000504181 MTURNQ8N3F0 131 aa5.86□□□□□ -1.47
LSM6-204ENST00000504181 IGLV5-48A0A075B6I7 105 aa5.85□□□□□ -1.47
LSM6-204ENST00000504181 TRBV7-7A0A0K0K1E9 115 aa5.85□□□□□ -1.47
LSM6-204ENST00000504181 TSPEAR-AS2P59090 65 aa5.85□□□□□ -1.47
LSM6-204ENST00000504181 MT-ND4LP03901 98 aa5.83□□□□□ -1.48
LSM6-204ENST00000504181 RHEBQ15382 184 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms