RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 C4orf3Q8WVX3 66 aa4.73□□□□□ -1.65
SH3TC2-204ENST00000504091 IGKV4-1P06312 121 aa4.73□□□□□ -1.65
SH3TC2-204ENST00000504091 Q1T7F1 81 aa4.72□□□□□ -1.65
SH3TC2-204ENST00000504091 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
SH3TC2-204ENST00000504091 MAP1AP78559 2803 aaPredicted RBP4.72□□□□□ -1.65
SH3TC2-204ENST00000504091 A0A1B0GUV1 79 aa4.72□□□□□ -1.65
SH3TC2-204ENST00000504091 Q6ZTC4 211 aa4.72□□□□□ -1.65
SH3TC2-204ENST00000504091 LRBAP50851 2863 aa4.71□□□□□ -1.65
SH3TC2-204ENST00000504091 FLNCQ14315 2725 aa4.71□□□□□ -1.65
SH3TC2-204ENST00000504091 NDUFS5O43920 106 aa4.71□□□□□ -1.66
SH3TC2-204ENST00000504091 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
SH3TC2-204ENST00000504091 LIMD2Q9BT23 127 aa4.71□□□□□ -1.66
SH3TC2-204ENST00000504091 WFDC13Q8IUB5 93 aa4.71□□□□□ -1.66
SH3TC2-204ENST00000504091 Q6ZRP5 223 aa4.7□□□□□ -1.66
SH3TC2-204ENST00000504091 B9D2Q9BPU9 175 aa4.7□□□□□ -1.66
SH3TC2-204ENST00000504091 ZNF702PQ9H963 129 aa4.7□□□□□ -1.66
SH3TC2-204ENST00000504091 M0R378 163 aa4.7□□□□□ -1.66
SH3TC2-204ENST00000504091 KTN1-AS1Q86SY8 53 aa4.7□□□□□ -1.66
SH3TC2-204ENST00000504091 WFDC10AQ9H1F0 79 aa4.7□□□□□ -1.66
SH3TC2-204ENST00000504091 HCG22E2RYF7 251 aa4.69□□□□□ -1.66
SH3TC2-204ENST00000504091 IGLV6-57P01721 117 aa4.69□□□□□ -1.66
SH3TC2-204ENST00000504091 C10orf25Q5T742 122 aa4.69□□□□□ -1.66
SH3TC2-204ENST00000504091 WFDC10BQ8IUB3 73 aa4.69□□□□□ -1.66
SH3TC2-204ENST00000504091 DMXL1Q9Y485 3027 aa4.69□□□□□ -1.66
SH3TC2-204ENST00000504091 SMR3AQ99954 134 aa4.69□□□□□ -1.66
SH3TC2-204ENST00000504091 FSHBP01225 129 aa4.68□□□□□ -1.66
SH3TC2-204ENST00000504091 ELOF1P60002 83 aaKnown RBP4.68□□□□□ -1.66
SH3TC2-204ENST00000504091 KPRPQ5T749 579 aaPredicted RBP4.68□□□□□ -1.66
SH3TC2-204ENST00000504091 SYCNQ0VAF6 134 aa4.68□□□□□ -1.66
SH3TC2-204ENST00000504091 KIAA0087Q14695 138 aa4.68□□□□□ -1.66
SH3TC2-204ENST00000504091 CR1P17927 2039 aa4.68□□□□□ -1.66
SH3TC2-204ENST00000504091 ITPR1Q14643 2758 aa4.67□□□□□ -1.66
SH3TC2-204ENST00000504091 C1orf137Q5JT78 98 aa4.67□□□□□ -1.66
SH3TC2-204ENST00000504091 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
SH3TC2-204ENST00000504091 PSCAO43653 123 aa4.67□□□□□ -1.66
SH3TC2-204ENST00000504091 DEFB4AO15263 64 aa4.66□□□□□ -1.66
SH3TC2-204ENST00000504091 LY6G6CO95867 125 aa4.66□□□□□ -1.66
SH3TC2-204ENST00000504091 FLNAP21333 2647 aaKnown RBP4.66□□□□□ -1.66
SH3TC2-204ENST00000504091 DEFB116Q30KQ4 102 aa4.66□□□□□ -1.66
SH3TC2-204ENST00000504091 Q6YL49 198 aa4.66□□□□□ -1.66
SH3TC2-204ENST00000504091 CFAP46Q8IYW2 2715 aa4.66□□□□□ -1.66
SH3TC2-204ENST00000504091 AKAP13Q12802 2813 aa4.66□□□□□ -1.66
SH3TC2-204ENST00000504091 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.65□□□□□ -1.66
SH3TC2-204ENST00000504091 ATMQ13315 3056 aa4.65□□□□□ -1.66
SH3TC2-204ENST00000504091 DNAJC9-AS1A6NH13 148 aa4.65□□□□□ -1.67
SH3TC2-204ENST00000504091 ATP11AUNQ6ZP68 121 aa4.65□□□□□ -1.67
SH3TC2-204ENST00000504091 A0A0J9YWU9 116 aa4.64□□□□□ -1.67
SH3TC2-204ENST00000504091 IGHV4-30-4P0DP06 118 aa4.64□□□□□ -1.67
SH3TC2-204ENST00000504091 IGHV4-31P0DP07 118 aa4.64□□□□□ -1.67
SH3TC2-204ENST00000504091 Q8NDZ9 215 aa4.64□□□□□ -1.67
SH3TC2-204ENST00000504091 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
SH3TC2-204ENST00000504091 DHRS4-AS1Q9P1J3 65 aa4.64□□□□□ -1.67
SH3TC2-204ENST00000504091 CYP4F30PQ9H0H9 118 aa4.63□□□□□ -1.67
SH3TC2-204ENST00000504091 VPS13CQ709C8 3753 aa4.63□□□□□ -1.67
SH3TC2-204ENST00000504091 C6orf48Q9UBA6 75 aa4.63□□□□□ -1.67
SH3TC2-204ENST00000504091 H0Y9P7 68 aa4.63□□□□□ -1.67
SH3TC2-204ENST00000504091 A0A1B0GW54 56 aa4.62□□□□□ -1.67
SH3TC2-204ENST00000504091 K7EQZ3 153 aa4.62□□□□□ -1.67
SH3TC2-204ENST00000504091 EGFEM1PQ0D2K5 195 aa4.62□□□□□ -1.67
SH3TC2-204ENST00000504091 PRAC1Q96KF2 57 aa4.62□□□□□ -1.67
SH3TC2-204ENST00000504091 ST20-AS1Q8NBB2 130 aa4.62□□□□□ -1.67
SH3TC2-204ENST00000504091 IGKV2D-24A0A075B6R9 120 aa4.62□□□□□ -1.67
SH3TC2-204ENST00000504091 TENM4Q6N022 2769 aa4.62□□□□□ -1.67
SH3TC2-204ENST00000504091 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
SH3TC2-204ENST00000504091 Q8NBF4 154 aa4.61□□□□□ -1.67
SH3TC2-204ENST00000504091 CUBNO60494 3623 aa4.61□□□□□ -1.67
SH3TC2-204ENST00000504091 RPL37AP8A6NKH3 93 aa4.61□□□□□ -1.67
SH3TC2-204ENST00000504091 DEFB135Q30KP9 77 aa4.61□□□□□ -1.67
SH3TC2-204ENST00000504091 LINC00588Q9Y4M8 146 aa4.61□□□□□ -1.67
SH3TC2-204ENST00000504091 LELP1Q5T871 98 aa4.6□□□□□ -1.67
SH3TC2-204ENST00000504091 Q5VV11 94 aa4.6□□□□□ -1.67
SH3TC2-204ENST00000504091 C16orf90A8MZG2 172 aa4.6□□□□□ -1.67
SH3TC2-204ENST00000504091 C7orf65Q6ZTY9 151 aa4.6□□□□□ -1.67
SH3TC2-204ENST00000504091 H0Y9J4 135 aa4.6□□□□□ -1.67
SH3TC2-204ENST00000504091 KRTAP24-1Q3LI83 254 aa4.6□□□□□ -1.67
SH3TC2-204ENST00000504091 CASC2Q6XLA1 102 aa4.59□□□□□ -1.67
SH3TC2-204ENST00000504091 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.68
SH3TC2-204ENST00000504091 SPART-AS1P0CW21 52 aa4.59□□□□□ -1.68
SH3TC2-204ENST00000504091 GVQW2A0A096LPI5 108 aaPredicted RBP4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 SPAG11AQ6PDA7 123 aa4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 LINC00612Q8N6U2 182 aa4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 GIG44P09565 113 aaPredicted RBP4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 Q8N377 158 aa4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 A0A087WSZ3 146 aa4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 LCE2BO14633 110 aa4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 KRTAP10-9P60411 292 aa4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 PCOTHQ58A44 107 aa4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 Q8N9P0 234 aaPredicted RBP4.58□□□□□ -1.68
SH3TC2-204ENST00000504091 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
SH3TC2-204ENST00000504091 LCA10Q71F78 164 aa4.57□□□□□ -1.68
SH3TC2-204ENST00000504091 A0A1W2PNM2 257 aa4.57□□□□□ -1.68
SH3TC2-204ENST00000504091 A8MU10 97 aa4.57□□□□□ -1.68
SH3TC2-204ENST00000504091 COL6A5A8TX70 2615 aa4.57□□□□□ -1.68
SH3TC2-204ENST00000504091 H3BPC8 53 aa4.56□□□□□ -1.68
SH3TC2-204ENST00000504091 COA5Q86WW8 74 aa4.56□□□□□ -1.68
SH3TC2-204ENST00000504091 AKAP9Q99996 3911 aa4.56□□□□□ -1.68
SH3TC2-204ENST00000504091 IGLV1-51P01701 117 aa4.56□□□□□ -1.68
SH3TC2-204ENST00000504091 CDC42SE1Q9NRR8 79 aa4.56□□□□□ -1.68
SH3TC2-204ENST00000504091 C7orf33Q8WU49 177 aa4.55□□□□□ -1.68
SH3TC2-204ENST00000504091 IGLV5-48A0A075B6I7 105 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms