RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 LINC00483Q53H64 154 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 ADAMTSL4-AS1Q5T5F5 129 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 SSBP3-AS1Q7Z2R9 100 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 CBY1Q9Y3M2 126 aa6.84□□□□□ -1.31
MED28-203ENST00000503945 ERC2-IT1O76042 136 aa6.83□□□□□ -1.32
MED28-203ENST00000503945 IGLV6-57P01721 117 aa6.83□□□□□ -1.32
MED28-203ENST00000503945 NPC2P61916 151 aa6.83□□□□□ -1.32
MED28-203ENST00000503945 Q6ZRX8 168 aa6.83□□□□□ -1.32
MED28-203ENST00000503945 IGLV9-49A0A0B4J1Y8 123 aa6.82□□□□□ -1.32
MED28-203ENST00000503945 FP248Q71RG6 208 aaPredicted RBP6.82□□□□□ -1.32
MED28-203ENST00000503945 TRAV23DV6A0A075B6W5 121 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 ZNF73O43830 326 aaPredicted RBP6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
MED28-203ENST00000503945 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 Q9BRP9 147 aa6.81□□□□□ -1.32
MED28-203ENST00000503945 SOSTDC1Q6X4U4 206 aa6.8□□□□□ -1.32
MED28-203ENST00000503945 OR13C6PQ8NH95 151 aa6.8□□□□□ -1.32
MED28-203ENST00000503945 EIF4EBP3O60516 100 aaPredicted RBP6.79□□□□□ -1.32
MED28-203ENST00000503945 MOBPQ13875 183 aa6.79□□□□□ -1.32
MED28-203ENST00000503945 LINC01545Q5VT33 79 aa6.79□□□□□ -1.32
MED28-203ENST00000503945 C5orf52A6NGY3 159 aa6.78□□□□□ -1.32
MED28-203ENST00000503945 TIMM17BO60830 172 aa6.78□□□□□ -1.32
MED28-203ENST00000503945 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
MED28-203ENST00000503945 SPANXCQ9NY87 97 aa6.78□□□□□ -1.32
MED28-203ENST00000503945 LINC00518Q8N0U6 118 aa6.77□□□□□ -1.33
MED28-203ENST00000503945 ZNF815PA8K554 130 aa6.76□□□□□ -1.33
MED28-203ENST00000503945 SLC25A20O43772 301 aa6.76□□□□□ -1.33
MED28-203ENST00000503945 RPS29P62273 56 aaKnown RBP6.76□□□□□ -1.33
MED28-203ENST00000503945 C3orf79P0CE67 100 aa6.75□□□□□ -1.33
MED28-203ENST00000503945 C9orf153Q5TBE3 101 aa6.75□□□□□ -1.33
MED28-203ENST00000503945 LITAFQ99732 161 aa6.75□□□□□ -1.33
MED28-203ENST00000503945 DHRS4-AS1Q9P1J3 65 aa6.75□□□□□ -1.33
MED28-203ENST00000503945 KRTDAPP60985 99 aa6.74□□□□□ -1.33
MED28-203ENST00000503945 SLC25A34Q6PIV7 304 aa6.74□□□□□ -1.33
MED28-203ENST00000503945 ST20-AS1Q8NBB2 130 aa6.74□□□□□ -1.33
MED28-203ENST00000503945 SPANXDQ9BXN6 97 aa6.74□□□□□ -1.33
MED28-203ENST00000503945 KRTAP13-3Q3SY46 172 aa6.73□□□□□ -1.33
MED28-203ENST00000503945 SCGB1D4Q6XE38 83 aa6.73□□□□□ -1.33
MED28-203ENST00000503945 Q8N377 158 aa6.73□□□□□ -1.33
MED28-203ENST00000503945 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
MED28-203ENST00000503945 C20orf202A1L168 122 aa6.72□□□□□ -1.33
MED28-203ENST00000503945 COA6Q5JTJ3 125 aaKnown RBP6.72□□□□□ -1.33
MED28-203ENST00000503945 TAL2Q16559 108 aa6.71□□□□□ -1.34
MED28-203ENST00000503945 TTTY13Q9BZ97 58 aa6.71□□□□□ -1.34
MED28-203ENST00000503945 LAMTOR3Q9UHA4 124 aa6.71□□□□□ -1.34
MED28-203ENST00000503945 COX7BP24311 80 aa6.7□□□□□ -1.34
MED28-203ENST00000503945 AKR1D1P51857 326 aa6.7□□□□□ -1.34
MED28-203ENST00000503945 IFITM1P13164 125 aa6.69□□□□□ -1.34
MED28-203ENST00000503945 SPRR1BP22528 89 aa6.69□□□□□ -1.34
MED28-203ENST00000503945 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
MED28-203ENST00000503945 C6orf99Q4VX62 202 aa6.69□□□□□ -1.34
MED28-203ENST00000503945 A6NDN8 102 aa6.68□□□□□ -1.34
MED28-203ENST00000503945 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
MED28-203ENST00000503945 Q6ZVH6 145 aa6.68□□□□□ -1.34
MED28-203ENST00000503945 DEFB105AQ8NG35 78 aa6.68□□□□□ -1.34
MED28-203ENST00000503945 TRBV7-6A0A0J9YX20 115 aa6.67□□□□□ -1.34
MED28-203ENST00000503945 ELOF1P60002 83 aaKnown RBP6.67□□□□□ -1.34
MED28-203ENST00000503945 TEX49A0A1B0GTD5 131 aa6.66□□□□□ -1.34
MED28-203ENST00000503945 HRCT1Q6UXD1 115 aa6.66□□□□□ -1.34
MED28-203ENST00000503945 MUSTN1Q8IVN3 82 aa6.66□□□□□ -1.34
MED28-203ENST00000503945 ATOH7Q8N100 152 aa6.66□□□□□ -1.34
MED28-203ENST00000503945 SNRPEP62304 92 aaKnown RBP6.65□□□□□ -1.34
MED28-203ENST00000503945 ANKRD39Q53RE8 183 aa6.65□□□□□ -1.34
MED28-203ENST00000503945 LIMD2Q9BT23 127 aa6.65□□□□□ -1.34
MED28-203ENST00000503945 A0A1B0GWB2 263 aa6.64□□□□□ -1.35
MED28-203ENST00000503945 PRO1933Q9H354 126 aa6.64□□□□□ -1.35
MED28-203ENST00000503945 A4D1N5 150 aa6.63□□□□□ -1.35
MED28-203ENST00000503945 Q1RN00 199 aa6.63□□□□□ -1.35
MED28-203ENST00000503945 PCP2Q8IVA1 136 aa6.63□□□□□ -1.35
MED28-203ENST00000503945 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
MED28-203ENST00000503945 TRAV13-2A0A0B4J235 113 aa6.62□□□□□ -1.35
MED28-203ENST00000503945 CD164Q04900 197 aa6.62□□□□□ -1.35
MED28-203ENST00000503945 S100A2P29034 98 aa6.61□□□□□ -1.35
MED28-203ENST00000503945 VAMP3Q15836 100 aa6.61□□□□□ -1.35
MED28-203ENST00000503945 XP32Q5T750 250 aa6.61□□□□□ -1.35
MED28-203ENST00000503945 HSBP1L1C9JCN9 74 aa6.6□□□□□ -1.35
MED28-203ENST00000503945 H7C2G1 150 aa6.6□□□□□ -1.35
MED28-203ENST00000503945 LINC01547P58512 204 aaPredicted RBP6.6□□□□□ -1.35
MED28-203ENST00000503945 NHP2Q9NX24 153 aaKnown RBP6.6□□□□□ -1.35
MED28-203ENST00000503945 FSIP2Q5CZC0 6907 aa6.58□□□□□ -1.36
MED28-203ENST00000503945 GHRHP01286 108 aa6.58□□□□□ -1.36
MED28-203ENST00000503945 SMIM29Q86T20 159 aa6.58□□□□□ -1.36
MED28-203ENST00000503945 SMIM11BQ8TCY0 68 aa6.58□□□□□ -1.36
MED28-203ENST00000503945 IGLV5-48A0A075B6I7 105 aa6.57□□□□□ -1.36
MED28-203ENST00000503945 HIST3H2BBQ8N257 126 aa6.56□□□□□ -1.36
MED28-203ENST00000503945 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
MED28-203ENST00000503945 C9orf92A6NGG3 77 aa6.55□□□□□ -1.36
MED28-203ENST00000503945 S100A6P06703 90 aa6.55□□□□□ -1.36
MED28-203ENST00000503945 Q5XG85 94 aa6.55□□□□□ -1.36
MED28-203ENST00000503945 HIST1H2BLQ99880 126 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms