RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FAM168BA1KXE4 195 aa13.74□□□□□ -0.21
UBE2D3-216ENST00000503742 CCDC179H3BU77 68 aa13.72□□□□□ -0.21
UBE2D3-216ENST00000503742 C14orf177Q52M58 125 aa13.72□□□□□ -0.21
UBE2D3-216ENST00000503742 SMCR5Q8TEV8 140 aa13.72□□□□□ -0.21
UBE2D3-216ENST00000503742 Q6ZRN7 208 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-216ENST00000503742 LINC00528Q8N1L1 170 aa13.71□□□□□ -0.22
UBE2D3-216ENST00000503742 LRCOL1A6NCL2 159 aa13.7□□□□□ -0.22
UBE2D3-216ENST00000503742 C14orf132Q9NPU4 83 aa13.7□□□□□ -0.22
UBE2D3-216ENST00000503742 Q6ZQY7 126 aa13.69□□□□□ -0.22
UBE2D3-216ENST00000503742 JMJD7-PLA2G4BH0Y9G9 81 aa13.67□□□□□ -0.22
UBE2D3-216ENST00000503742 GAGE2AQ6NT46 116 aa13.67□□□□□ -0.22
UBE2D3-216ENST00000503742 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-216ENST00000503742 SS18L2Q9UHA2 77 aa13.67□□□□□ -0.22
UBE2D3-216ENST00000503742 IGLV1-50A0A075B6I6 118 aa13.67□□□□□ -0.22
UBE2D3-216ENST00000503742 FAM236AA0A1B0GUQ0 79 aa13.67□□□□□ -0.22
UBE2D3-216ENST00000503742 FAM236BA0A1B0GV22 79 aa13.67□□□□□ -0.22
UBE2D3-216ENST00000503742 C16orf90A8MZG2 172 aa13.66□□□□□ -0.22
UBE2D3-216ENST00000503742 H3BQ85 93 aa13.66□□□□□ -0.22
UBE2D3-216ENST00000503742 A0A096LNI7 61 aa13.65□□□□□ -0.22
UBE2D3-216ENST00000503742 FAM19A5Q7Z5A7 132 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-216ENST00000503742 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-216ENST00000503742 PRYO14603 147 aa13.64□□□□□ -0.23
UBE2D3-216ENST00000503742 RPL37AP8A6NKH3 93 aa13.63□□□□□ -0.23
UBE2D3-216ENST00000503742 MRPL55Q7Z7F7 128 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-216ENST00000503742 KRTAP4-16G5E9R7 235 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-216ENST00000503742 SPRR1AP35321 89 aa13.62□□□□□ -0.23
UBE2D3-216ENST00000503742 M0R2N4 97 aa13.6□□□□□ -0.23
UBE2D3-216ENST00000503742 C9orf163Q8N9P6 203 aa13.59□□□□□ -0.23
UBE2D3-216ENST00000503742 IGKV2-24A0A0C4DH68 120 aa13.58□□□□□ -0.24
UBE2D3-216ENST00000503742 GHRHP01286 108 aa13.58□□□□□ -0.24
UBE2D3-216ENST00000503742 FBN3Q75N90 2809 aa13.58□□□□□ -0.24
UBE2D3-216ENST00000503742 CCKP06307 115 aa13.58□□□□□ -0.24
UBE2D3-216ENST00000503742 KMT2AQ03164 3969 aa13.57□□□□□ -0.24
UBE2D3-216ENST00000503742 A0A1W2PNN7 141 aa13.56□□□□□ -0.24
UBE2D3-216ENST00000503742 Q6JHZ5 121 aa13.56□□□□□ -0.24
UBE2D3-216ENST00000503742 Q6ZR54 194 aa13.56□□□□□ -0.24
UBE2D3-216ENST00000503742 LAMTOR3Q9UHA4 124 aa13.56□□□□□ -0.24
UBE2D3-216ENST00000503742 Q6ZRX8 168 aa13.56□□□□□ -0.24
UBE2D3-216ENST00000503742 UQCRQO14949 82 aa13.55□□□□□ -0.24
UBE2D3-216ENST00000503742 RBM3P98179 157 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-216ENST00000503742 HIST1H4AP62805 103 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-216ENST00000503742 ATOX1O00244 68 aa13.53□□□□□ -0.24
UBE2D3-216ENST00000503742 C3orf22Q8N5N4 141 aa13.53□□□□□ -0.24
UBE2D3-216ENST00000503742 ETDCA0A1B0GVM5 59 aa13.52□□□□□ -0.24
UBE2D3-216ENST00000503742 DHRS4-AS1Q9P1J3 65 aa13.52□□□□□ -0.24
UBE2D3-216ENST00000503742 LOC110117498A0A087WWA1 95 aa13.52□□□□□ -0.25
UBE2D3-216ENST00000503742 Q9BRP9 147 aa13.52□□□□□ -0.25
UBE2D3-216ENST00000503742 PKIGQ9Y2B9 76 aa13.52□□□□□ -0.25
UBE2D3-216ENST00000503742 DNAH2Q9P225 4427 aa13.51□□□□□ -0.25
UBE2D3-216ENST00000503742 CHTF8P0CG12 524 aa13.51□□□□□ -0.25
UBE2D3-216ENST00000503742 Q6ZQT0 140 aa13.51□□□□□ -0.25
UBE2D3-216ENST00000503742 LINC00846Q9NV44 126 aa13.51□□□□□ -0.25
UBE2D3-216ENST00000503742 REG3GQ6UW15 175 aa13.5□□□□□ -0.25
UBE2D3-216ENST00000503742 DNAH6Q9C0G6 4158 aa13.5□□□□□ -0.25
UBE2D3-216ENST00000503742 A0A087WTM6 91 aa13.49□□□□□ -0.25
UBE2D3-216ENST00000503742 SVIPQ8NHG7 77 aa13.49□□□□□ -0.25
UBE2D3-216ENST00000503742 C9orf153Q5TBE3 101 aa13.47□□□□□ -0.25
UBE2D3-216ENST00000503742 COX7CP15954 63 aa13.47□□□□□ -0.25
UBE2D3-216ENST00000503742 DSCR8Q96T75 97 aa13.47□□□□□ -0.25
UBE2D3-216ENST00000503742 LINC01547P58512 204 aaPredicted RBP13.46□□□□□ -0.25
UBE2D3-216ENST00000503742 ATP5EP2Q5VTU8 51 aa13.46□□□□□ -0.25
UBE2D3-216ENST00000503742 PDE6GP18545 87 aa13.45□□□□□ -0.26
UBE2D3-216ENST00000503742 Q8N377 158 aa13.45□□□□□ -0.26
UBE2D3-216ENST00000503742 LINC00474Q9P2X8 69 aa13.45□□□□□ -0.26
UBE2D3-216ENST00000503742 HECTD4Q9Y4D8 3996 aa13.45□□□□□ -0.26
UBE2D3-216ENST00000503742 TRBV7-4A0A0J9YYF1 115 aa13.44□□□□□ -0.26
UBE2D3-216ENST00000503742 DNAH17Q9UFH2 4485 aa13.44□□□□□ -0.26
UBE2D3-216ENST00000503742 WWC2-AS2Q96NR7 200 aa13.43□□□□□ -0.26
UBE2D3-216ENST00000503742 PHF5AQ7RTV0 110 aaKnown RBP13.41□□□□□ -0.26
UBE2D3-216ENST00000503742 PANO1I0J062 215 aa13.41□□□□□ -0.26
UBE2D3-216ENST00000503742 ERC2-IT1O76042 136 aa13.41□□□□□ -0.26
UBE2D3-216ENST00000503742 IGLV5-48A0A075B6I7 105 aa13.4□□□□□ -0.26
UBE2D3-216ENST00000503742 CRYGAP11844 174 aa13.4□□□□□ -0.26
UBE2D3-216ENST00000503742 UBE2BP63146 152 aa13.4□□□□□ -0.27
UBE2D3-216ENST00000503742 DEFB105AQ8NG35 78 aa13.4□□□□□ -0.27
UBE2D3-216ENST00000503742 IGKV3D-7A0A0C4DH55 119 aa13.39□□□□□ -0.27
UBE2D3-216ENST00000503742 LY6G6CO95867 125 aa13.39□□□□□ -0.27
UBE2D3-216ENST00000503742 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
UBE2D3-216ENST00000503742 C1orf134Q5TEV5 83 aa13.38□□□□□ -0.27
UBE2D3-216ENST00000503742 ST20-AS1Q8NBB2 130 aa13.38□□□□□ -0.27
UBE2D3-216ENST00000503742 ALMS1Q8TCU4 4167 aa13.37□□□□□ -0.27
UBE2D3-216ENST00000503742 SMIM20Q8N5G0 67 aa13.37□□□□□ -0.27
UBE2D3-216ENST00000503742 LINC00476Q8WZB0 136 aa13.37□□□□□ -0.27
UBE2D3-216ENST00000503742 EPM2AB3EWF7 344 aa13.36□□□□□ -0.27
UBE2D3-216ENST00000503742 SPACA4Q8TDM5 124 aa13.36□□□□□ -0.27
UBE2D3-216ENST00000503742 TGP01266 2768 aa13.36□□□□□ -0.27
UBE2D3-216ENST00000503742 FAM19A1Q7Z5A9 133 aa13.36□□□□□ -0.27
UBE2D3-216ENST00000503742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.35□□□□□ -0.27
UBE2D3-216ENST00000503742 RTL8CO15255 209 aa13.34□□□□□ -0.27
UBE2D3-216ENST00000503742 SERP2Q8N6R1 65 aa13.34□□□□□ -0.27
UBE2D3-216ENST00000503742 PRLHP81277 87 aa13.33□□□□□ -0.28
UBE2D3-216ENST00000503742 UBL5Q9BZL1 73 aa13.33□□□□□ -0.28
UBE2D3-216ENST00000503742 FUSP35637 526 aaKnown RBP eCLIP13.32□□□□□ -0.28
UBE2D3-216ENST00000503742 TNP2Q05952 138 aa13.31□□□□□ -0.28
UBE2D3-216ENST00000503742 H0Y9J4 135 aa13.3□□□□□ -0.28
UBE2D3-216ENST00000503742 DPH3Q96FX2 82 aa13.29□□□□□ -0.28
UBE2D3-216ENST00000503742 A0A087WVE0 104 aa13.28□□□□□ -0.28
UBE2D3-216ENST00000503742 FRAS1Q86XX4 4008 aa13.28□□□□□ -0.28
UBE2D3-216ENST00000503742 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
UBE2D3-216ENST00000503742 SMIM29Q86T20 159 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms