RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 TRAV10A0A0B4J240 114 aa7.74□□□□□ -1.17
USP46-204ENST00000503060 SEC61BP60468 96 aaKnown RBP7.74□□□□□ -1.17
USP46-204ENST00000503060 C7orf65Q6ZTY9 151 aa7.74□□□□□ -1.17
USP46-204ENST00000503060 LINC00474Q9P2X8 69 aa7.74□□□□□ -1.17
USP46-204ENST00000503060 RBM3P98179 157 aaKnown RBP7.73□□□□□ -1.17
USP46-204ENST00000503060 KRTAP26-1Q6PEX3 210 aa7.73□□□□□ -1.17
USP46-204ENST00000503060 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
USP46-204ENST00000503060 FAM218AQ96MZ4 157 aa7.73□□□□□ -1.17
USP46-204ENST00000503060 ZNF706Q9Y5V0 76 aaPredicted RBP7.73□□□□□ -1.17
USP46-204ENST00000503060 IGHV6-1A0A0B4J1U7 121 aa7.71□□□□□ -1.17
USP46-204ENST00000503060 MUC7Q8TAX7 377 aa7.71□□□□□ -1.17
USP46-204ENST00000503060 DIRC1Q969H9 104 aa7.71□□□□□ -1.17
USP46-204ENST00000503060 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
USP46-204ENST00000503060 TEX49A0A1B0GTD5 131 aa7.71□□□□□ -1.18
USP46-204ENST00000503060 H0YGX0 51 aa7.7□□□□□ -1.18
USP46-204ENST00000503060 LINC01554Q52M75 96 aa7.69□□□□□ -1.18
USP46-204ENST00000503060 C6orf48Q9UBA6 75 aa7.69□□□□□ -1.18
USP46-204ENST00000503060 DNAH10OSP0CZ25 163 aa7.69□□□□□ -1.18
USP46-204ENST00000503060 FUSP35637 526 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP46-204ENST00000503060 Q8NDZ9 215 aa7.69□□□□□ -1.18
USP46-204ENST00000503060 HIGD2BQ4VC39 106 aa7.68□□□□□ -1.18
USP46-204ENST00000503060 C15orf56Q8N910 161 aa7.68□□□□□ -1.18
USP46-204ENST00000503060 NBEAL1Q6ZS30 2694 aa7.68□□□□□ -1.18
USP46-204ENST00000503060 A0A087WYN8 130 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 BAALC-AS2P0C853 105 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 CXCL6P80162 114 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 S100A7L2Q5SY68 101 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 HUWE1Q7Z6Z7 4374 aaKnown RBP7.67□□□□□ -1.18
USP46-204ENST00000503060 IGKV2D-24A0A075B6R9 120 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 NCR3O14931 201 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 NOTCH2NLQ7Z3S9 236 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 CAMK2N2Q96S95 79 aa7.67□□□□□ -1.18
USP46-204ENST00000503060 CDK2AP2O75956 126 aa7.66□□□□□ -1.18
USP46-204ENST00000503060 H7BZZ5 65 aa7.65□□□□□ -1.18
USP46-204ENST00000503060 DNAL4O96015 105 aa7.64□□□□□ -1.19
USP46-204ENST00000503060 UBE2AP49459 152 aa7.64□□□□□ -1.19
USP46-204ENST00000503060 C22orf24Q9Y442 160 aa7.64□□□□□ -1.19
USP46-204ENST00000503060 SDIM1Q6ZPB5 146 aa7.64□□□□□ -1.19
USP46-204ENST00000503060 MGAM2Q2M2H8 2515 aa7.64□□□□□ -1.19
USP46-204ENST00000503060 LECT2O14960 151 aa7.63□□□□□ -1.19
USP46-204ENST00000503060 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
USP46-204ENST00000503060 MPLKIPQ8TAP9 179 aa7.62□□□□□ -1.19
USP46-204ENST00000503060 A6NN06 94 aa7.61□□□□□ -1.19
USP46-204ENST00000503060 NDUFC1O43677 76 aa7.6□□□□□ -1.19
USP46-204ENST00000503060 IGLV6-57P01721 117 aa7.6□□□□□ -1.19
USP46-204ENST00000503060 ATP11AUNQ6ZP68 121 aa7.6□□□□□ -1.19
USP46-204ENST00000503060 SYCNQ0VAF6 134 aa7.59□□□□□ -1.19
USP46-204ENST00000503060 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
USP46-204ENST00000503060 SLPIP03973 132 aa7.59□□□□□ -1.19
USP46-204ENST00000503060 Q1T7F1 81 aa7.58□□□□□ -1.2
USP46-204ENST00000503060 Q8N814 137 aa7.58□□□□□ -1.2
USP46-204ENST00000503060 TRBV10-3A0A0K0K1G6 114 aa7.58□□□□□ -1.2
USP46-204ENST00000503060 RMI2Q96E14 147 aa7.58□□□□□ -1.2
USP46-204ENST00000503060 B9D2Q9BPU9 175 aa7.58□□□□□ -1.2
USP46-204ENST00000503060 ORMDL1Q9P0S3 153 aa7.58□□□□□ -1.2
USP46-204ENST00000503060 CASC10Q5T4H9 136 aa7.57□□□□□ -1.2
USP46-204ENST00000503060 Q6ZRP5 223 aa7.56□□□□□ -1.2
USP46-204ENST00000503060 KLKP1Q107X0 134 aa7.56□□□□□ -1.2
USP46-204ENST00000503060 LINC00575Q6W349 94 aa7.56□□□□□ -1.2
USP46-204ENST00000503060 TRAV23DV6A0A075B6W5 121 aa7.55□□□□□ -1.2
USP46-204ENST00000503060 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
USP46-204ENST00000503060 SCXQ7RTU7 201 aa7.55□□□□□ -1.2
USP46-204ENST00000503060 DNAH9Q9NYC9 4486 aa7.55□□□□□ -1.2
USP46-204ENST00000503060 OBSCN-AS1Q96MR7 158 aa7.54□□□□□ -1.2
USP46-204ENST00000503060 IGLV9-49A0A0B4J1Y8 123 aa7.53□□□□□ -1.2
USP46-204ENST00000503060 APLNQ9ULZ1 77 aa7.53□□□□□ -1.2
USP46-204ENST00000503060 TLX1NBP0CAT3 122 aa7.52□□□□□ -1.2
USP46-204ENST00000503060 DNAH1Q9P2D7 4330 aa7.52□□□□□ -1.21
USP46-204ENST00000503060 BCE1O60756 84 aa7.51□□□□□ -1.21
USP46-204ENST00000503060 C14orf132Q9NPU4 83 aa7.51□□□□□ -1.21
USP46-204ENST00000503060 C20orf197Q8N268 126 aa7.51□□□□□ -1.21
USP46-204ENST00000503060 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
USP46-204ENST00000503060 UBE2DNLQ8IWF7 75 aa7.5□□□□□ -1.21
USP46-204ENST00000503060 SMCR5Q8TEV8 140 aa7.5□□□□□ -1.21
USP46-204ENST00000503060 COX7BP24311 80 aa7.5□□□□□ -1.21
USP46-204ENST00000503060 KRTAP1-5Q9BYS1 174 aa7.5□□□□□ -1.21
USP46-204ENST00000503060 ELOF1P60002 83 aaKnown RBP7.49□□□□□ -1.21
USP46-204ENST00000503060 JMJD7-PLA2G4BH0Y9G9 81 aa7.48□□□□□ -1.21
USP46-204ENST00000503060 FAM229BQ4G0N7 80 aa7.48□□□□□ -1.21
USP46-204ENST00000503060 COL7A1Q02388 2944 aa7.47□□□□□ -1.21
USP46-204ENST00000503060 Q6ZQY7 126 aa7.47□□□□□ -1.21
USP46-204ENST00000503060 DYNC2H1Q8NCM8 4307 aaKnown RBP7.46□□□□□ -1.21
USP46-204ENST00000503060 C7orf33Q8WU49 177 aa7.46□□□□□ -1.22
USP46-204ENST00000503060 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
USP46-204ENST00000503060 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
USP46-204ENST00000503060 H3BQ85 93 aa7.44□□□□□ -1.22
USP46-204ENST00000503060 Q6JHZ5 121 aa7.44□□□□□ -1.22
USP46-204ENST00000503060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.44□□□□□ -1.22
USP46-204ENST00000503060 KCNQ1DNQ9H478 68 aa7.44□□□□□ -1.22
USP46-204ENST00000503060 FAM168BA1KXE4 195 aa7.43□□□□□ -1.22
USP46-204ENST00000503060 F8WEM9 126 aa7.43□□□□□ -1.22
USP46-204ENST00000503060 PSCAO43653 123 aa7.43□□□□□ -1.22
USP46-204ENST00000503060 KRTAP7-1Q8IUC3 87 aa7.42□□□□□ -1.22
USP46-204ENST00000503060 LINC00846Q9NV44 126 aa7.41□□□□□ -1.22
USP46-204ENST00000503060 C16orf90A8MZG2 172 aa7.4□□□□□ -1.22
USP46-204ENST00000503060 CNBPP62633 177 aaKnown RBP7.4□□□□□ -1.22
USP46-204ENST00000503060 IGLV1-50A0A075B6I6 118 aa7.4□□□□□ -1.23
USP46-204ENST00000503060 TRAV7A0A075B6U4 112 aa7.4□□□□□ -1.23
USP46-204ENST00000503060 RPL37AP8A6NKH3 93 aa7.39□□□□□ -1.23
USP46-204ENST00000503060 C3orf84H3BNL1 204 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms