RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 CBLN1P23435 193 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 PMCHL1Q16048 86 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 SOSTDC1Q6X4U4 206 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 TMEM167AQ8TBQ9 72 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 S100A16Q96FQ6 103 aaKnown RBP2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 TMEM242Q9NWH2 141 aa2.1□□□□□ -2.07
HMGB1P3-201ENST00000502802 DNAH11Q96DT5 4516 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV7-7A0A0K0K1E9 115 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 MT-ATP8P03928 68 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 SLC25A5P05141 298 aaKnown RBP2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 SLC25A6P12236 298 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 TDRG1Q3Y452 100 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 DYNLRB2Q8TF09 96 aa2.09□□□□□ -2.07
HMGB1P3-201ENST00000502802 TRBV7-1A0A0A6YYK4 115 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 ATOX1O00244 68 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 TIMM17BO60830 172 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 PPYP01298 95 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 IL5P05113 134 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 KRTAP12-4P60329 112 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 SNRPD3P62318 126 aaKnown RBP2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 ZNF818PQ6ZRF7 136 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 TSKUQ8WUA8 353 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 PPDPFLQ8WWR9 84 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 DIRC1Q969H9 104 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 MGST2Q99735 147 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 LINC00467Q9BRT7 94 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 KIAA1109Q2LD37 5005 aa2.08□□□□□ -2.08
HMGB1P3-201ENST00000502802 UBE2L5PA0A1B0GUS4 154 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 KANTRA0A1W2PQU2 76 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 K7EIM0 57 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 LY6G6CO95867 125 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 CD3DP04234 171 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 CXCL1P09341 107 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 TPT1P13693 172 aaKnown RBP2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 FXYD4P59646 89 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 KRTDAPP60985 99 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 UBE2L3P68036 154 aaKnown RBP2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 WT1-ASQ06250 92 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 DEFB135Q30KP9 77 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 PSMG4Q5JS54 123 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 MIC13Q5XKP0 118 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 OR10AG1Q8NH19 301 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 NPCDR1Q9BY65 106 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 KRTAP4-3Q9BYR4 195 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 C14orf132Q9NPU4 83 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 NDUFA4L2Q9NRX3 87 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 SPCS1Q9Y6A9 102 aa2.07□□□□□ -2.08
HMGB1P3-201ENST00000502802 A0A1W2PPM0 123 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 C7orf77A4D0Y5 90 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 NUPR2A6NF83 97 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 C17orf112F2Z3M2 114 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 I3L2K1 104 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 NDUFA4O00483 81 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 ADCYAP1P18509 176 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 PDE6HQ13956 83 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 BVES-AS1Q5T3Y7 98 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 ATP11AUNQ6ZP68 121 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 C5orf38Q86SI9 138 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 OR2T35Q8NGX2 323 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 FXYD6Q9H0Q3 95 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 TMEM14BQ9NUH8 114 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 LY96Q9Y6Y9 160 aa2.06□□□□□ -2.08
HMGB1P3-201ENST00000502802 HSPG2P98160 4391 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 IGKV3-7A0A075B6H7 116 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRAV12-1A0A0B4J245 112 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 DEFB4AO15263 64 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 NDUFC1O43677 76 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 C18orf32Q8TCD1 76 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 LSM10Q969L4 123 aaKnown RBP2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 LINC01600Q96MT4 127 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 RHPN1-AS1Q9BWJ2 59 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 DPH3P1Q9H4G8 78 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 MRPL36Q9P0J6 103 aaKnown RBP2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 LRP1BQ9NZR2 4599 aa2.05□□□□□ -2.08
HMGB1P3-201ENST00000502802 RBAKDNA6NC62 111 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 SYS1-DBNDD2H3BUS1 97 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 LYRM1O43325 122 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 BCE1O60756 84 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 IGKCP01834 107 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 APOBP04114 4563 aaKnown RBP2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 ACYP1P07311 99 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 RNASE3P12724 160 aaKnown RBP2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 DEFB131AP59861 70 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 PRCDQ00LT1 54 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 SPATA45Q537H7 98 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 SPINK9Q5DT21 86 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRGV9Q99603 122 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 APLNQ9ULZ1 77 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 PCLOQ9Y6V0 5065 aa2.04□□□□□ -2.08
HMGB1P3-201ENST00000502802 DNAH5Q8TE73 4624 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRAV2A0A0B4J234 112 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 SFTA3P0C7M3 94 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 ZC2HC1AQ96GY0 325 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 C20orf78Q9BR46 151 aa2.03□□□□□ -2.08
HMGB1P3-201ENST00000502802 TRAV10A0A0B4J240 114 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 NAP1L6A6NFF2 107 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 K7ERJ3 54 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 SIX6O95475 246 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 CKS2P33552 79 aa2.02□□□□□ -2.09
HMGB1P3-201ENST00000502802 DEFB1P60022 68 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms