RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 NPC2P61916 151 aa11.14□□□□□ -0.63
SFXN1-203ENST00000502393 SYS1-DBNDD2H3BUS1 97 aa11.13□□□□□ -0.63
SFXN1-203ENST00000502393 KRTAP13-3Q3SY46 172 aa11.13□□□□□ -0.63
SFXN1-203ENST00000502393 CBY1Q9Y3M2 126 aa11.13□□□□□ -0.63
SFXN1-203ENST00000502393 LCE2AQ5TA79 106 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-203ENST00000502393 HINT1P49773 126 aaPredicted RBP11.1□□□□□ -0.63
SFXN1-203ENST00000502393 Q8N377 158 aa11.1□□□□□ -0.63
SFXN1-203ENST00000502393 FAT4Q6V0I7 4981 aa11.1□□□□□ -0.63
SFXN1-203ENST00000502393 C5orf52A6NGY3 159 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BKO60814 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BJP06899 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BOP23527 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BBP33778 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BDP58876 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BCP62807 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST2H2BEQ16778 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BHQ93079 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BNQ99877 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 HIST1H2BMQ99879 126 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
SFXN1-203ENST00000502393 TIMM17BO60830 172 aa11.08□□□□□ -0.64
SFXN1-203ENST00000502393 LINC01545Q5VT33 79 aa11.08□□□□□ -0.64
SFXN1-203ENST00000502393 LINC00308Q8TCZ7 52 aa11.08□□□□□ -0.64
SFXN1-203ENST00000502393 LITAFQ99732 161 aa11.08□□□□□ -0.64
SFXN1-203ENST00000502393 SLC25A20O43772 301 aa11.07□□□□□ -0.64
SFXN1-203ENST00000502393 C9orf153Q5TBE3 101 aa11.06□□□□□ -0.64
SFXN1-203ENST00000502393 PET117Q6UWS5 81 aa11.06□□□□□ -0.64
SFXN1-203ENST00000502393 ST20-AS1Q8NBB2 130 aa11.05□□□□□ -0.64
SFXN1-203ENST00000502393 ASB16-AS1Q495Z4 193 aa11.04□□□□□ -0.64
SFXN1-203ENST00000502393 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
SFXN1-203ENST00000502393 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
SFXN1-203ENST00000502393 SPANXDQ9BXN6 97 aa11.02□□□□□ -0.65
SFXN1-203ENST00000502393 DHRS4-AS1Q9P1J3 65 aa11.02□□□□□ -0.65
SFXN1-203ENST00000502393 SPRR1BP22528 89 aa11□□□□□ -0.65
SFXN1-203ENST00000502393 SLC25A34Q6PIV7 304 aa11□□□□□ -0.65
SFXN1-203ENST00000502393 C3orf79P0CE67 100 aa10.99□□□□□ -0.65
SFXN1-203ENST00000502393 SEC61BP60468 96 aaKnown RBP10.99□□□□□ -0.65
SFXN1-203ENST00000502393 LINC00518Q8N0U6 118 aa10.99□□□□□ -0.65
SFXN1-203ENST00000502393 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
SFXN1-203ENST00000502393 KRTAP9-2Q9BYQ4 174 aa10.97□□□□□ -0.65
SFXN1-203ENST00000502393 ELOF1P60002 83 aaKnown RBP10.96□□□□□ -0.65
SFXN1-203ENST00000502393 COA6Q5JTJ3 125 aaKnown RBP10.95□□□□□ -0.66
SFXN1-203ENST00000502393 COX7BP24311 80 aa10.94□□□□□ -0.66
SFXN1-203ENST00000502393 KRTDAPP60985 99 aa10.94□□□□□ -0.66
SFXN1-203ENST00000502393 LAMTOR3Q9UHA4 124 aa10.94□□□□□ -0.66
SFXN1-203ENST00000502393 C6orf99Q4VX62 202 aa10.93□□□□□ -0.66
SFXN1-203ENST00000502393 XP32Q5T750 250 aa10.93□□□□□ -0.66
SFXN1-203ENST00000502393 SCGB1D4Q6XE38 83 aa10.92□□□□□ -0.66
SFXN1-203ENST00000502393 COPS9Q8WXC6 57 aa10.92□□□□□ -0.66
SFXN1-203ENST00000502393 LIMD2Q9BT23 127 aa10.92□□□□□ -0.66
SFXN1-203ENST00000502393 TRBV7-6A0A0J9YX20 115 aa10.9□□□□□ -0.66
SFXN1-203ENST00000502393 C20orf202A1L168 122 aa10.9□□□□□ -0.66
SFXN1-203ENST00000502393 KRTAP4-1Q9BYQ7 146 aa10.9□□□□□ -0.66
SFXN1-203ENST00000502393 IFITM1P13164 125 aa10.89□□□□□ -0.67
SFXN1-203ENST00000502393 TAL2Q16559 108 aa10.89□□□□□ -0.67
SFXN1-203ENST00000502393 HRCT1Q6UXD1 115 aa10.88□□□□□ -0.67
SFXN1-203ENST00000502393 TEX49A0A1B0GTD5 131 aa10.87□□□□□ -0.67
SFXN1-203ENST00000502393 Q6ZVH6 145 aa10.87□□□□□ -0.67
SFXN1-203ENST00000502393 ANKRD39Q53RE8 183 aa10.86□□□□□ -0.67
SFXN1-203ENST00000502393 DEFB105AQ8NG35 78 aa10.86□□□□□ -0.67
SFXN1-203ENST00000502393 A0A1B0GWB2 263 aa10.85□□□□□ -0.67
SFXN1-203ENST00000502393 AKR1D1P51857 326 aa10.85□□□□□ -0.67
SFXN1-203ENST00000502393 LINC01547P58512 204 aaPredicted RBP10.85□□□□□ -0.67
SFXN1-203ENST00000502393 CD164Q04900 197 aa10.85□□□□□ -0.67
SFXN1-203ENST00000502393 Q1RN00 199 aa10.85□□□□□ -0.67
SFXN1-203ENST00000502393 A6NDN8 102 aa10.84□□□□□ -0.67
SFXN1-203ENST00000502393 PRO1933Q9H354 126 aa10.84□□□□□ -0.67
SFXN1-203ENST00000502393 ATOH7Q8N100 152 aa10.83□□□□□ -0.68
SFXN1-203ENST00000502393 MUSTN1Q8IVN3 82 aa10.82□□□□□ -0.68
SFXN1-203ENST00000502393 PCP2Q8IVA1 136 aa10.81□□□□□ -0.68
SFXN1-203ENST00000502393 A4D1N5 150 aa10.8□□□□□ -0.68
SFXN1-203ENST00000502393 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
SFXN1-203ENST00000502393 IGLV5-48A0A075B6I7 105 aa10.79□□□□□ -0.68
SFXN1-203ENST00000502393 H7C2G1 150 aa10.79□□□□□ -0.68
SFXN1-203ENST00000502393 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
SFXN1-203ENST00000502393 SNRPEP62304 92 aaKnown RBP10.78□□□□□ -0.68
SFXN1-203ENST00000502393 Q5XG85 94 aa10.77□□□□□ -0.69
SFXN1-203ENST00000502393 NHP2Q9NX24 153 aaKnown RBP10.76□□□□□ -0.69
SFXN1-203ENST00000502393 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
SFXN1-203ENST00000502393 SMIM11BQ8TCY0 68 aa10.74□□□□□ -0.69
SFXN1-203ENST00000502393 PCOTHQ58A44 107 aa10.71□□□□□ -0.69
SFXN1-203ENST00000502393 C1orf195Q5TG92 126 aa10.7□□□□□ -0.7
SFXN1-203ENST00000502393 VAMP3Q15836 100 aa10.69□□□□□ -0.7
SFXN1-203ENST00000502393 A0A0G2JQZ4 141 aa10.68□□□□□ -0.7
SFXN1-203ENST00000502393 IGLV8-61A0A075B6I0 122 aa10.67□□□□□ -0.7
SFXN1-203ENST00000502393 HIST3H2BBQ8N257 126 aa10.67□□□□□ -0.7
SFXN1-203ENST00000502393 HSBP1L1C9JCN9 74 aa10.66□□□□□ -0.7
SFXN1-203ENST00000502393 S100A2P29034 98 aa10.66□□□□□ -0.7
SFXN1-203ENST00000502393 LCE2CQ5TA81 110 aa10.66□□□□□ -0.7
SFXN1-203ENST00000502393 HIST1H2BLQ99880 126 aa10.66□□□□□ -0.7
SFXN1-203ENST00000502393 KRTAP9-6A0A140TA67 174 aa10.65□□□□□ -0.7
SFXN1-203ENST00000502393 LINC00575Q6W349 94 aa10.64□□□□□ -0.71
SFXN1-203ENST00000502393 F8WEM9 126 aa10.63□□□□□ -0.71
SFXN1-203ENST00000502393 TCL1BO95988 128 aa10.63□□□□□ -0.71
SFXN1-203ENST00000502393 KRTAP19-2Q3LHN2 52 aa10.63□□□□□ -0.71
SFXN1-203ENST00000502393 hADV29S1A0JD25 119 aa10.61□□□□□ -0.71
SFXN1-203ENST00000502393 Q6ZQY7 126 aa10.6□□□□□ -0.71
SFXN1-203ENST00000502393 LCE2DQ5TA82 110 aaPredicted RBP10.59□□□□□ -0.71
SFXN1-203ENST00000502393 Q6JHZ5 121 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms