RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 SERP2Q8N6R1 65 aa6.44□□□□□ -1.38
CLIP1-204ENST00000501271 PDE6GP18545 87 aa6.43□□□□□ -1.38
CLIP1-204ENST00000501271 CASC10Q5T4H9 136 aa6.43□□□□□ -1.38
CLIP1-204ENST00000501271 SMIM20Q8N5G0 67 aa6.43□□□□□ -1.38
CLIP1-204ENST00000501271 UPK3BQ9BT76 320 aa6.43□□□□□ -1.38
CLIP1-204ENST00000501271 LINC01547P58512 204 aaPredicted RBP6.42□□□□□ -1.38
CLIP1-204ENST00000501271 TRAV10A0A0B4J240 114 aa6.42□□□□□ -1.38
CLIP1-204ENST00000501271 NKAPP1Q8N9T2 125 aa6.41□□□□□ -1.38
CLIP1-204ENST00000501271 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
CLIP1-204ENST00000501271 COL6A5A8TX70 2615 aa6.41□□□□□ -1.38
CLIP1-204ENST00000501271 GHRHP01286 108 aa6.41□□□□□ -1.38
CLIP1-204ENST00000501271 HAMPP81172 84 aa6.41□□□□□ -1.38
CLIP1-204ENST00000501271 KCNQ1DNQ9H478 68 aa6.41□□□□□ -1.38
CLIP1-204ENST00000501271 FAM168BA1KXE4 195 aa6.4□□□□□ -1.39
CLIP1-204ENST00000501271 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.39
CLIP1-204ENST00000501271 LYSTQ99698 3801 aa6.4□□□□□ -1.39
CLIP1-204ENST00000501271 MRAPQ8TCY5 172 aa6.39□□□□□ -1.39
CLIP1-204ENST00000501271 TM2D3Q9BRN9 247 aa6.39□□□□□ -1.39
CLIP1-204ENST00000501271 TNP2Q05952 138 aa6.39□□□□□ -1.39
CLIP1-204ENST00000501271 RPL37AP8A6NKH3 93 aa6.38□□□□□ -1.39
CLIP1-204ENST00000501271 K7EIL1 84 aa6.38□□□□□ -1.39
CLIP1-204ENST00000501271 DNAH10Q8IVF4 4471 aa6.38□□□□□ -1.39
CLIP1-204ENST00000501271 CXCL6P80162 114 aa6.37□□□□□ -1.39
CLIP1-204ENST00000501271 SCXQ7RTU7 201 aa6.37□□□□□ -1.39
CLIP1-204ENST00000501271 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
CLIP1-204ENST00000501271 PLA2G2DQ9UNK4 145 aa6.37□□□□□ -1.39
CLIP1-204ENST00000501271 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
CLIP1-204ENST00000501271 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
CLIP1-204ENST00000501271 Q8N377 158 aa6.36□□□□□ -1.39
CLIP1-204ENST00000501271 IGLV1-50A0A075B6I6 118 aa6.35□□□□□ -1.39
CLIP1-204ENST00000501271 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
CLIP1-204ENST00000501271 Q6ZRX8 168 aa6.35□□□□□ -1.39
CLIP1-204ENST00000501271 Q9BRP9 147 aa6.35□□□□□ -1.39
CLIP1-204ENST00000501271 COL7A1Q02388 2944 aa6.35□□□□□ -1.39
CLIP1-204ENST00000501271 DNAH9Q9NYC9 4486 aa6.34□□□□□ -1.39
CLIP1-204ENST00000501271 RMI2Q96E14 147 aa6.34□□□□□ -1.39
CLIP1-204ENST00000501271 PRYO14603 147 aa6.34□□□□□ -1.4
CLIP1-204ENST00000501271 SPRR1AP35321 89 aa6.34□□□□□ -1.4
CLIP1-204ENST00000501271 FAM19A5Q7Z5A7 132 aaPredicted RBP6.34□□□□□ -1.4
CLIP1-204ENST00000501271 LCE2BO14633 110 aa6.33□□□□□ -1.4
CLIP1-204ENST00000501271 TMEM258P61165 79 aa6.33□□□□□ -1.4
CLIP1-204ENST00000501271 DHRS4-AS1Q9P1J3 65 aa6.33□□□□□ -1.4
CLIP1-204ENST00000501271 ETDCA0A1B0GVM5 59 aa6.32□□□□□ -1.4
CLIP1-204ENST00000501271 MGAM2Q2M2H8 2515 aa6.32□□□□□ -1.4
CLIP1-204ENST00000501271 IGLV5-48A0A075B6I7 105 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 C3orf84H3BNL1 204 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 MRPL55Q7Z7F7 128 aaKnown RBP6.31□□□□□ -1.4
CLIP1-204ENST00000501271 C20orf197Q8N268 126 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 ST20-AS1Q8NBB2 130 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 STAB2Q8WWQ8 2551 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 TRAV7A0A075B6U4 112 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 LOC107984640A0A0U1RRK4 108 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 BCE1O60756 84 aa6.31□□□□□ -1.4
CLIP1-204ENST00000501271 Q8N9L7 120 aa6.3□□□□□ -1.4
CLIP1-204ENST00000501271 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
CLIP1-204ENST00000501271 J3KT08 172 aa6.29□□□□□ -1.4
CLIP1-204ENST00000501271 NREPQ16612 68 aa6.29□□□□□ -1.4
CLIP1-204ENST00000501271 DNAH7Q8WXX0 4024 aa6.28□□□□□ -1.4
CLIP1-204ENST00000501271 A0A1W2PNM2 257 aa6.28□□□□□ -1.4
CLIP1-204ENST00000501271 IGKV4-1P06312 121 aa6.28□□□□□ -1.4
CLIP1-204ENST00000501271 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
CLIP1-204ENST00000501271 A0A096LNI7 61 aa6.27□□□□□ -1.41
CLIP1-204ENST00000501271 BPY2O14599 106 aa6.27□□□□□ -1.41
CLIP1-204ENST00000501271 UBE2BP63146 152 aa6.27□□□□□ -1.41
CLIP1-204ENST00000501271 REG3GQ6UW15 175 aa6.27□□□□□ -1.41
CLIP1-204ENST00000501271 DYNC2H1Q8NCM8 4307 aaKnown RBP6.27□□□□□ -1.41
CLIP1-204ENST00000501271 CSMD3Q7Z407 3707 aa6.27□□□□□ -1.41
CLIP1-204ENST00000501271 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
CLIP1-204ENST00000501271 IGKV2-24A0A0C4DH68 120 aa6.25□□□□□ -1.41
CLIP1-204ENST00000501271 FUSP35637 526 aaKnown RBP eCLIP6.25□□□□□ -1.41
CLIP1-204ENST00000501271 RPS28P62857 69 aaKnown RBP6.25□□□□□ -1.41
CLIP1-204ENST00000501271 OXTP01178 125 aa6.25□□□□□ -1.41
CLIP1-204ENST00000501271 KLKP1Q107X0 134 aa6.25□□□□□ -1.41
CLIP1-204ENST00000501271 SNURFQ9Y675 71 aa6.25□□□□□ -1.41
CLIP1-204ENST00000501271 A0A1W2PNN7 141 aa6.24□□□□□ -1.41
CLIP1-204ENST00000501271 H7BZZ5 65 aa6.24□□□□□ -1.41
CLIP1-204ENST00000501271 CNBPP62633 177 aaKnown RBP6.24□□□□□ -1.41
CLIP1-204ENST00000501271 Q8NBF4 154 aa6.24□□□□□ -1.41
CLIP1-204ENST00000501271 C16orf90A8MZG2 172 aa6.24□□□□□ -1.41
CLIP1-204ENST00000501271 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
CLIP1-204ENST00000501271 PSCAO43653 123 aa6.23□□□□□ -1.41
CLIP1-204ENST00000501271 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
CLIP1-204ENST00000501271 APLNQ9ULZ1 77 aa6.23□□□□□ -1.41
CLIP1-204ENST00000501271 PLECQ15149 4684 aaKnown RBP6.23□□□□□ -1.41
CLIP1-204ENST00000501271 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.23□□□□□ -1.41
CLIP1-204ENST00000501271 UBE2DNLQ8IWF7 75 aa6.23□□□□□ -1.41
CLIP1-204ENST00000501271 SPRR4Q96PI1 79 aa6.23□□□□□ -1.41
CLIP1-204ENST00000501271 A0A1B0GW54 56 aa6.22□□□□□ -1.41
CLIP1-204ENST00000501271 PRLHP81277 87 aa6.22□□□□□ -1.41
CLIP1-204ENST00000501271 FAM236DA0A1B0GTK5 79 aa6.21□□□□□ -1.42
CLIP1-204ENST00000501271 FAM236CP0DP71 79 aa6.21□□□□□ -1.42
CLIP1-204ENST00000501271 A0A0G2JQZ4 141 aa6.2□□□□□ -1.42
CLIP1-204ENST00000501271 LINC00476Q8WZB0 136 aa6.2□□□□□ -1.42
CLIP1-204ENST00000501271 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
CLIP1-204ENST00000501271 OCR1Q9BZK8 76 aa6.2□□□□□ -1.42
CLIP1-204ENST00000501271 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
CLIP1-204ENST00000501271 F8WEM9 126 aa6.19□□□□□ -1.42
CLIP1-204ENST00000501271 HIGD2AQ9BW72 106 aa6.18□□□□□ -1.42
CLIP1-204ENST00000501271 SRRM2Q9UQ35 2752 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms