RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 VPREB1P12018 145 aa9.12□□□□□ -0.95
MUC1-220ENST00000498431 MIR7-3HGQ8N6C7 128 aa9.12□□□□□ -0.95
MUC1-220ENST00000498431 COX8AP10176 69 aa9.11□□□□□ -0.95
MUC1-220ENST00000498431 S100A12P80511 92 aa9.11□□□□□ -0.95
MUC1-220ENST00000498431 Q8NDZ9 215 aa9.11□□□□□ -0.95
MUC1-220ENST00000498431 KRTAP13-3Q3SY46 172 aa9.1□□□□□ -0.95
MUC1-220ENST00000498431 BOD1L2Q8IYS8 172 aa9.1□□□□□ -0.95
MUC1-220ENST00000498431 DLEU1O43261 78 aa9.09□□□□□ -0.95
MUC1-220ENST00000498431 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
MUC1-220ENST00000498431 ADAMTSL4-AS1Q5T5F5 129 aa9.09□□□□□ -0.95
MUC1-220ENST00000498431 C14orf144Q96I85 54 aa9.09□□□□□ -0.95
MUC1-220ENST00000498431 SMIM6P0DI80 62 aa9.08□□□□□ -0.96
MUC1-220ENST00000498431 LINC01547P58512 204 aaPredicted RBP9.08□□□□□ -0.96
MUC1-220ENST00000498431 FP248Q71RG6 208 aaPredicted RBP9.08□□□□□ -0.96
MUC1-220ENST00000498431 DAND5Q8N907 189 aa9.08□□□□□ -0.96
MUC1-220ENST00000498431 LITAFQ99732 161 aa9.08□□□□□ -0.96
MUC1-220ENST00000498431 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
MUC1-220ENST00000498431 FSIP2Q5CZC0 6907 aa9.08□□□□□ -0.96
MUC1-220ENST00000498431 SPAG11AQ6PDA7 123 aa9.07□□□□□ -0.96
MUC1-220ENST00000498431 LINC00337Q8N6G1 96 aa9.07□□□□□ -0.96
MUC1-220ENST00000498431 CRCT1Q9UGL9 99 aa9.07□□□□□ -0.96
MUC1-220ENST00000498431 RPL24P83731 157 aaKnown RBP9.06□□□□□ -0.96
MUC1-220ENST00000498431 SLC25A34Q6PIV7 304 aa9.06□□□□□ -0.96
MUC1-220ENST00000498431 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
MUC1-220ENST00000498431 MIEN1Q9BRT3 115 aa9.06□□□□□ -0.96
MUC1-220ENST00000498431 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
MUC1-220ENST00000498431 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
MUC1-220ENST00000498431 SPANXDQ9BXN6 97 aa9.05□□□□□ -0.96
MUC1-220ENST00000498431 SPANXCQ9NY87 97 aa9.05□□□□□ -0.96
MUC1-220ENST00000498431 Q6ZVH6 145 aa9.04□□□□□ -0.96
MUC1-220ENST00000498431 NPC2P61916 151 aa9.03□□□□□ -0.96
MUC1-220ENST00000498431 Q8NBF4 154 aa9.03□□□□□ -0.96
MUC1-220ENST00000498431 LINC00308Q8TCZ7 52 aa9.03□□□□□ -0.96
MUC1-220ENST00000498431 COPS9Q8WXC6 57 aa9.03□□□□□ -0.96
MUC1-220ENST00000498431 SPANXB1Q9NS25 103 aaPredicted RBP9.03□□□□□ -0.96
MUC1-220ENST00000498431 IFITM1P13164 125 aa9.02□□□□□ -0.97
MUC1-220ENST00000498431 SOSTDC1Q6X4U4 206 aa9.02□□□□□ -0.97
MUC1-220ENST00000498431 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
MUC1-220ENST00000498431 HIGD1BQ9P298 99 aa9.01□□□□□ -0.97
MUC1-220ENST00000498431 EIF4EBP3O60516 100 aaPredicted RBP9□□□□□ -0.97
MUC1-220ENST00000498431 NDUFC2O95298 119 aa9□□□□□ -0.97
MUC1-220ENST00000498431 SEC61BP60468 96 aaKnown RBP8.99□□□□□ -0.97
MUC1-220ENST00000498431 MUSTN1Q8IVN3 82 aa8.99□□□□□ -0.97
MUC1-220ENST00000498431 UQCR10Q9UDW1 63 aa8.99□□□□□ -0.97
MUC1-220ENST00000498431 C2orf91Q6ZV80 131 aa8.98□□□□□ -0.97
MUC1-220ENST00000498431 HIST1H4GQ99525 98 aa8.98□□□□□ -0.97
MUC1-220ENST00000498431 C12orf57Q99622 126 aa8.98□□□□□ -0.97
MUC1-220ENST00000498431 NCR3O14931 201 aa8.97□□□□□ -0.97
MUC1-220ENST00000498431 TRBV10-2A0A0K0K1G8 114 aa8.96□□□□□ -0.98
MUC1-220ENST00000498431 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
MUC1-220ENST00000498431 PRO1933Q9H354 126 aa8.96□□□□□ -0.98
MUC1-220ENST00000498431 ZNF706Q9Y5V0 76 aaPredicted RBP8.96□□□□□ -0.98
MUC1-220ENST00000498431 SPINK1P00995 79 aa8.95□□□□□ -0.98
MUC1-220ENST00000498431 TAL2Q16559 108 aa8.94□□□□□ -0.98
MUC1-220ENST00000498431 LINC00518Q8N0U6 118 aa8.94□□□□□ -0.98
MUC1-220ENST00000498431 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
MUC1-220ENST00000498431 S100A7L2Q5SY68 101 aa8.92□□□□□ -0.98
MUC1-220ENST00000498431 Q8N377 158 aa8.92□□□□□ -0.98
MUC1-220ENST00000498431 TRBV10-3A0A0K0K1G6 114 aa8.91□□□□□ -0.98
MUC1-220ENST00000498431 A4D1N5 150 aa8.91□□□□□ -0.98
MUC1-220ENST00000498431 KRTAP4-16G5E9R7 235 aaPredicted RBP8.91□□□□□ -0.98
MUC1-220ENST00000498431 PRYO14603 147 aa8.91□□□□□ -0.98
MUC1-220ENST00000498431 DDTP30046 118 aa8.91□□□□□ -0.98
MUC1-220ENST00000498431 SPRR1AP35321 89 aa8.91□□□□□ -0.98
MUC1-220ENST00000498431 TSTD3H0UI37 97 aa8.9□□□□□ -0.98
MUC1-220ENST00000498431 HSD52Q0P140 79 aa8.9□□□□□ -0.98
MUC1-220ENST00000498431 KRTAP19-2Q3LHN2 52 aa8.9□□□□□ -0.98
MUC1-220ENST00000498431 LINC00483Q53H64 154 aa8.9□□□□□ -0.98
MUC1-220ENST00000498431 XP32Q5T750 250 aa8.9□□□□□ -0.98
MUC1-220ENST00000498431 OR13C6PQ8NH95 151 aa8.9□□□□□ -0.98
MUC1-220ENST00000498431 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
MUC1-220ENST00000498431 MOBPQ13875 183 aa8.89□□□□□ -0.99
MUC1-220ENST00000498431 CEND1Q8N111 149 aa8.89□□□□□ -0.99
MUC1-220ENST00000498431 IGLV9-49A0A0B4J1Y8 123 aa8.88□□□□□ -0.99
MUC1-220ENST00000498431 GAGE2AQ6NT46 116 aa8.88□□□□□ -0.99
MUC1-220ENST00000498431 KCNQ1DNQ9H478 68 aa8.88□□□□□ -0.99
MUC1-220ENST00000498431 CBY1Q9Y3M2 126 aa8.88□□□□□ -0.99
MUC1-220ENST00000498431 TRAV13-2A0A0B4J235 113 aa8.87□□□□□ -0.99
MUC1-220ENST00000498431 A6NDN8 102 aa8.87□□□□□ -0.99
MUC1-220ENST00000498431 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
MUC1-220ENST00000498431 TMEM238LA0A1B0GVL6 79 aa8.86□□□□□ -0.99
MUC1-220ENST00000498431 ETDCA0A1B0GVM5 59 aa8.86□□□□□ -0.99
MUC1-220ENST00000498431 A6NJY4 79 aa8.86□□□□□ -0.99
MUC1-220ENST00000498431 RPS29P62273 56 aaKnown RBP8.86□□□□□ -0.99
MUC1-220ENST00000498431 MT1HP80294 61 aa8.86□□□□□ -0.99
MUC1-220ENST00000498431 TRAV23DV6A0A075B6W5 121 aa8.84□□□□□ -0.99
MUC1-220ENST00000498431 SLC25A20O43772 301 aa8.83□□□□□ -1
MUC1-220ENST00000498431 CFC1BP0CG36 223 aa8.83□□□□□ -1
MUC1-220ENST00000498431 CFC1P0CG37 223 aa8.83□□□□□ -1
MUC1-220ENST00000498431 FXYD2P54710 66 aa8.83□□□□□ -1
MUC1-220ENST00000498431 SSBP3-AS1Q7Z2R9 100 aa8.83□□□□□ -1
MUC1-220ENST00000498431 B5MCH6 92 aa8.82□□□□□ -1
MUC1-220ENST00000498431 RAB37Q96AX2 223 aa8.82□□□□□ -1
MUC1-220ENST00000498431 A0A0B4J2C4 111 aa8.81□□□□□ -1
MUC1-220ENST00000498431 ZNF73O43830 326 aaPredicted RBP8.81□□□□□ -1
MUC1-220ENST00000498431 Q9BRP9 147 aa8.81□□□□□ -1
MUC1-220ENST00000498431 M0R143 59 aa8.8□□□□□ -1
MUC1-220ENST00000498431 HINT1P49773 126 aaPredicted RBP8.79□□□□□ -1
MUC1-220ENST00000498431 BVES-AS1Q5T3Y7 98 aa8.79□□□□□ -1
MUC1-220ENST00000498431 SMIM11BQ8TCY0 68 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms