RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 USP17L23D6RBM5 183 aa8.24□□□□□ -1.09
AFF3-215ENST00000498090 BCE1O60756 84 aa8.24□□□□□ -1.09
AFF3-215ENST00000498090 VPREB1P12018 145 aa8.24□□□□□ -1.09
AFF3-215ENST00000498090 C1orf43Q9BWL3 253 aa8.24□□□□□ -1.09
AFF3-215ENST00000498090 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
AFF3-215ENST00000498090 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
AFF3-215ENST00000498090 C15orf56Q8N910 161 aa8.21□□□□□ -1.09
AFF3-215ENST00000498090 ESRGQ1W209 222 aa8.21□□□□□ -1.1
AFF3-215ENST00000498090 HIGD2BQ4VC39 106 aa8.21□□□□□ -1.1
AFF3-215ENST00000498090 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
AFF3-215ENST00000498090 PLECQ15149 4684 aaKnown RBP8.2□□□□□ -1.1
AFF3-215ENST00000498090 Q6ZRU5 148 aa8.2□□□□□ -1.1
AFF3-215ENST00000498090 A0A087WVE0 104 aa8.19□□□□□ -1.1
AFF3-215ENST00000498090 CXCL6P80162 114 aa8.19□□□□□ -1.1
AFF3-215ENST00000498090 TRBV7-4A0A0J9YYF1 115 aa8.18□□□□□ -1.1
AFF3-215ENST00000498090 WWC2-AS2Q96NR7 200 aa8.18□□□□□ -1.1
AFF3-215ENST00000498090 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
AFF3-215ENST00000498090 SMIM20Q8N5G0 67 aa8.18□□□□□ -1.1
AFF3-215ENST00000498090 UPK3BQ9BT76 320 aa8.18□□□□□ -1.1
AFF3-215ENST00000498090 SYCNQ0VAF6 134 aa8.17□□□□□ -1.1
AFF3-215ENST00000498090 CSMD3Q7Z407 3707 aa8.17□□□□□ -1.1
AFF3-215ENST00000498090 IGKV2D-24A0A075B6R9 120 aa8.16□□□□□ -1.1
AFF3-215ENST00000498090 NUPR2A6NF83 97 aa8.16□□□□□ -1.1
AFF3-215ENST00000498090 TLX1NBP0CAT3 122 aa8.16□□□□□ -1.1
AFF3-215ENST00000498090 TMEM258P61165 79 aa8.16□□□□□ -1.1
AFF3-215ENST00000498090 APLNQ9ULZ1 77 aa8.16□□□□□ -1.1
AFF3-215ENST00000498090 PLA2G2DQ9UNK4 145 aa8.16□□□□□ -1.1
AFF3-215ENST00000498090 LINC01547P58512 204 aaPredicted RBP8.15□□□□□ -1.1
AFF3-215ENST00000498090 Q6ZVQ6 151 aa8.15□□□□□ -1.1
AFF3-215ENST00000498090 SVIPQ8NHG7 77 aa8.15□□□□□ -1.1
AFF3-215ENST00000498090 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
AFF3-215ENST00000498090 Q6ZRP5 223 aa8.14□□□□□ -1.11
AFF3-215ENST00000498090 KCNQ1DNQ9H478 68 aa8.14□□□□□ -1.11
AFF3-215ENST00000498090 FAM19A1Q7Z5A9 133 aa8.13□□□□□ -1.11
AFF3-215ENST00000498090 NKAPP1Q8N9T2 125 aa8.13□□□□□ -1.11
AFF3-215ENST00000498090 RMI2Q96E14 147 aa8.13□□□□□ -1.11
AFF3-215ENST00000498090 LINC00588Q9Y4M8 146 aa8.13□□□□□ -1.11
AFF3-215ENST00000498090 KMT2CQ8NEZ4 4911 aaKnown RBP8.12□□□□□ -1.11
AFF3-215ENST00000498090 A0A1B0GW54 56 aa8.11□□□□□ -1.11
AFF3-215ENST00000498090 J3KT08 172 aa8.11□□□□□ -1.11
AFF3-215ENST00000498090 HAMPP81172 84 aa8.11□□□□□ -1.11
AFF3-215ENST00000498090 IGLV5-37A0A075B6J1 123 aa8.1□□□□□ -1.11
AFF3-215ENST00000498090 LOC107984640A0A0U1RRK4 108 aa8.1□□□□□ -1.11
AFF3-215ENST00000498090 DHRS4-AS1Q9P1J3 65 aa8.1□□□□□ -1.11
AFF3-215ENST00000498090 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
AFF3-215ENST00000498090 M0R2N4 97 aa8.08□□□□□ -1.12
AFF3-215ENST00000498090 CASC10Q5T4H9 136 aa8.08□□□□□ -1.12
AFF3-215ENST00000498090 LYSTQ99698 3801 aa8.08□□□□□ -1.12
AFF3-215ENST00000498090 PRYO14603 147 aa8.08□□□□□ -1.12
AFF3-215ENST00000498090 TENM2Q9NT68 2774 aa8.07□□□□□ -1.12
AFF3-215ENST00000498090 C3orf84H3BNL1 204 aa8.07□□□□□ -1.12
AFF3-215ENST00000498090 C7orf33Q8WU49 177 aa8.07□□□□□ -1.12
AFF3-215ENST00000498090 VPS13DQ5THJ4 4388 aa8.07□□□□□ -1.12
AFF3-215ENST00000498090 DNAH1Q9P2D7 4330 aa8.06□□□□□ -1.12
AFF3-215ENST00000498090 IGLV5-48A0A075B6I7 105 aa8.05□□□□□ -1.12
AFF3-215ENST00000498090 UBE2DNLQ8IWF7 75 aa8.05□□□□□ -1.12
AFF3-215ENST00000498090 SPRR1AP35321 89 aa8.04□□□□□ -1.12
AFF3-215ENST00000498090 SERTAD4-AS1Q5TG53 156 aa8.04□□□□□ -1.12
AFF3-215ENST00000498090 Q6ZRX8 168 aa8.04□□□□□ -1.12
AFF3-215ENST00000498090 IGLV1-50A0A075B6I6 118 aa8.03□□□□□ -1.12
AFF3-215ENST00000498090 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
AFF3-215ENST00000498090 NREPQ16612 68 aa8.02□□□□□ -1.13
AFF3-215ENST00000498090 CYSTM1Q9H1C7 97 aa8.02□□□□□ -1.13
AFF3-215ENST00000498090 ETDCA0A1B0GVM5 59 aa8.02□□□□□ -1.13
AFF3-215ENST00000498090 DPH3Q96FX2 82 aa8.02□□□□□ -1.13
AFF3-215ENST00000498090 KRTAP4-16G5E9R7 235 aaPredicted RBP8.01□□□□□ -1.13
AFF3-215ENST00000498090 FUSP35637 526 aaKnown RBP eCLIP8.01□□□□□ -1.13
AFF3-215ENST00000498090 KLKP1Q107X0 134 aa8.01□□□□□ -1.13
AFF3-215ENST00000498090 Q8N377 158 aa8.01□□□□□ -1.13
AFF3-215ENST00000498090 KRTAP1-5Q9BYS1 174 aa8.01□□□□□ -1.13
AFF3-215ENST00000498090 RYR3Q15413 4870 aa8.01□□□□□ -1.13
AFF3-215ENST00000498090 C20orf197Q8N268 126 aa8□□□□□ -1.13
AFF3-215ENST00000498090 NDUFC1O43677 76 aa7.99□□□□□ -1.13
AFF3-215ENST00000498090 ERC2-IT1O76042 136 aa7.99□□□□□ -1.13
AFF3-215ENST00000498090 MRPL55Q7Z7F7 128 aaKnown RBP7.98□□□□□ -1.13
AFF3-215ENST00000498090 SACSQ9NZJ4 4579 aa7.97□□□□□ -1.13
AFF3-215ENST00000498090 BPY2O14599 106 aa7.97□□□□□ -1.13
AFF3-215ENST00000498090 LINC00476Q8WZB0 136 aa7.97□□□□□ -1.13
AFF3-215ENST00000498090 TNP2Q05952 138 aa7.96□□□□□ -1.13
AFF3-215ENST00000498090 DEFB105AQ8NG35 78 aa7.96□□□□□ -1.13
AFF3-215ENST00000498090 DNAH6Q9C0G6 4158 aa7.96□□□□□ -1.14
AFF3-215ENST00000498090 Q9BRP9 147 aa7.95□□□□□ -1.14
AFF3-215ENST00000498090 RYR2Q92736 4967 aa7.95□□□□□ -1.14
AFF3-215ENST00000498090 NBDYA0A0U1RRE5 68 aa7.95□□□□□ -1.14
AFF3-215ENST00000498090 FAM236DA0A1B0GTK5 79 aa7.95□□□□□ -1.14
AFF3-215ENST00000498090 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
AFF3-215ENST00000498090 LY6G6CO95867 125 aa7.95□□□□□ -1.14
AFF3-215ENST00000498090 FAM236CP0DP71 79 aa7.95□□□□□ -1.14
AFF3-215ENST00000498090 H7BZZ5 65 aa7.94□□□□□ -1.14
AFF3-215ENST00000498090 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
AFF3-215ENST00000498090 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
AFF3-215ENST00000498090 FAM19A5Q7Z5A7 132 aaPredicted RBP7.94□□□□□ -1.14
AFF3-215ENST00000498090 KMT2AQ03164 3969 aa7.94□□□□□ -1.14
AFF3-215ENST00000498090 LCE6AA0A183 80 aa7.93□□□□□ -1.14
AFF3-215ENST00000498090 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
AFF3-215ENST00000498090 ATP5EP56381 51 aaPredicted RBP7.93□□□□□ -1.14
AFF3-215ENST00000498090 C1orf137Q5JT78 98 aa7.93□□□□□ -1.14
AFF3-215ENST00000498090 REG3GQ6UW15 175 aa7.93□□□□□ -1.14
AFF3-215ENST00000498090 Q8NBF4 154 aa7.93□□□□□ -1.14
AFF3-215ENST00000498090 DNAH10Q8IVF4 4471 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms