RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 NMUP48645 174 aa6.69□□□□□ -1.34
NUDCD3-211ENST00000497978 TSPEAR-AS2P59090 65 aa6.69□□□□□ -1.34
NUDCD3-211ENST00000497978 SPANXB1Q9NS25 103 aaPredicted RBP6.69□□□□□ -1.34
NUDCD3-211ENST00000497978 DPM2O94777 84 aa6.68□□□□□ -1.34
NUDCD3-211ENST00000497978 LGALS3P17931 250 aaKnown RBP6.68□□□□□ -1.34
NUDCD3-211ENST00000497978 S100A7L2Q5SY68 101 aa6.68□□□□□ -1.34
NUDCD3-211ENST00000497978 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
NUDCD3-211ENST00000497978 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
NUDCD3-211ENST00000497978 IGKCP01834 107 aa6.67□□□□□ -1.34
NUDCD3-211ENST00000497978 FABP4P15090 132 aa6.67□□□□□ -1.34
NUDCD3-211ENST00000497978 SSBP3-AS1Q7Z2R9 100 aa6.67□□□□□ -1.34
NUDCD3-211ENST00000497978 IGLV9-49A0A0B4J1Y8 123 aa6.66□□□□□ -1.34
NUDCD3-211ENST00000497978 NDUFC2O95298 119 aa6.66□□□□□ -1.34
NUDCD3-211ENST00000497978 MOBPQ13875 183 aa6.66□□□□□ -1.34
NUDCD3-211ENST00000497978 JOSD1Q15040 202 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-211ENST00000497978 Q6ZRX8 168 aa6.66□□□□□ -1.34
NUDCD3-211ENST00000497978 PMCHL2Q9BQD1 86 aa6.66□□□□□ -1.34
NUDCD3-211ENST00000497978 ERC2-IT1O76042 136 aa6.65□□□□□ -1.34
NUDCD3-211ENST00000497978 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.35
NUDCD3-211ENST00000497978 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
NUDCD3-211ENST00000497978 IGLV6-57P01721 117 aa6.64□□□□□ -1.35
NUDCD3-211ENST00000497978 RPS29P62273 56 aaKnown RBP6.64□□□□□ -1.35
NUDCD3-211ENST00000497978 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
NUDCD3-211ENST00000497978 Q9BRP9 147 aa6.64□□□□□ -1.35
NUDCD3-211ENST00000497978 CBY1Q9Y3M2 126 aa6.63□□□□□ -1.35
NUDCD3-211ENST00000497978 SLC25A20O43772 301 aa6.62□□□□□ -1.35
NUDCD3-211ENST00000497978 ZNF73O43830 326 aaPredicted RBP6.62□□□□□ -1.35
NUDCD3-211ENST00000497978 HINT1P49773 126 aaPredicted RBP6.62□□□□□ -1.35
NUDCD3-211ENST00000497978 NPC2P61916 151 aa6.62□□□□□ -1.35
NUDCD3-211ENST00000497978 A0A0J9YXY3 114 aa6.61□□□□□ -1.35
NUDCD3-211ENST00000497978 ASB16-AS1Q495Z4 193 aa6.61□□□□□ -1.35
NUDCD3-211ENST00000497978 C9orf153Q5TBE3 101 aa6.61□□□□□ -1.35
NUDCD3-211ENST00000497978 Q8N377 158 aa6.61□□□□□ -1.35
NUDCD3-211ENST00000497978 E9PLD3 99 aa6.6□□□□□ -1.35
NUDCD3-211ENST00000497978 SEC61BP60468 96 aaKnown RBP6.6□□□□□ -1.35
NUDCD3-211ENST00000497978 SOSTDC1Q6X4U4 206 aa6.6□□□□□ -1.35
NUDCD3-211ENST00000497978 C5orf52A6NGY3 159 aa6.59□□□□□ -1.35
NUDCD3-211ENST00000497978 ADAMTSL4-AS1Q5T5F5 129 aa6.59□□□□□ -1.35
NUDCD3-211ENST00000497978 SVIPQ8NHG7 77 aa6.59□□□□□ -1.35
NUDCD3-211ENST00000497978 COLCA2A8K830 154 aa6.58□□□□□ -1.36
NUDCD3-211ENST00000497978 SLC25A34Q6PIV7 304 aa6.57□□□□□ -1.36
NUDCD3-211ENST00000497978 OR13C6PQ8NH95 151 aa6.57□□□□□ -1.36
NUDCD3-211ENST00000497978 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
NUDCD3-211ENST00000497978 SYS1-DBNDD2H3BUS1 97 aa6.56□□□□□ -1.36
NUDCD3-211ENST00000497978 TIMM17BO60830 172 aa6.56□□□□□ -1.36
NUDCD3-211ENST00000497978 LCE4AQ5TA78 99 aa6.56□□□□□ -1.36
NUDCD3-211ENST00000497978 ST20-AS1Q8NBB2 130 aa6.56□□□□□ -1.36
NUDCD3-211ENST00000497978 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
NUDCD3-211ENST00000497978 MUC17Q685J3 4493 aa6.56□□□□□ -1.36
NUDCD3-211ENST00000497978 SLC7A5P1Q8MH63 180 aa6.55□□□□□ -1.36
NUDCD3-211ENST00000497978 DHRS4-AS1Q9P1J3 65 aa6.55□□□□□ -1.36
NUDCD3-211ENST00000497978 LINC01547P58512 204 aaPredicted RBP6.54□□□□□ -1.36
NUDCD3-211ENST00000497978 SPANXDQ9BXN6 97 aa6.54□□□□□ -1.36
NUDCD3-211ENST00000497978 ZNF815PA8K554 130 aa6.53□□□□□ -1.36
NUDCD3-211ENST00000497978 LINC01545Q5VT33 79 aa6.53□□□□□ -1.36
NUDCD3-211ENST00000497978 LITAFQ99732 161 aa6.53□□□□□ -1.36
NUDCD3-211ENST00000497978 LIMD2Q9BT23 127 aa6.53□□□□□ -1.36
NUDCD3-211ENST00000497978 LAMTOR3Q9UHA4 124 aa6.53□□□□□ -1.36
NUDCD3-211ENST00000497978 KRTAP9-7A8MTY7 169 aa6.52□□□□□ -1.37
NUDCD3-211ENST00000497978 SPRR1BP22528 89 aa6.52□□□□□ -1.37
NUDCD3-211ENST00000497978 PET117Q6UWS5 81 aa6.52□□□□□ -1.37
NUDCD3-211ENST00000497978 LINC00518Q8N0U6 118 aa6.52□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BKO60814 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BJP06899 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BOP23527 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 COX7BP24311 80 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BBP33778 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BDP58876 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BCP62807 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST2H2BEQ16778 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BHQ93079 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BNQ99877 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HIST1H2BMQ99879 126 aa6.51□□□□□ -1.37
NUDCD3-211ENST00000497978 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
NUDCD3-211ENST00000497978 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
NUDCD3-211ENST00000497978 ELOF1P60002 83 aaKnown RBP6.49□□□□□ -1.37
NUDCD3-211ENST00000497978 TAL2Q16559 108 aa6.49□□□□□ -1.37
NUDCD3-211ENST00000497978 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
NUDCD3-211ENST00000497978 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
NUDCD3-211ENST00000497978 TRIAP1O43715 76 aa6.48□□□□□ -1.37
NUDCD3-211ENST00000497978 SCGB1D4Q6XE38 83 aa6.48□□□□□ -1.37
NUDCD3-211ENST00000497978 DEFB105AQ8NG35 78 aa6.48□□□□□ -1.37
NUDCD3-211ENST00000497978 TTTY13Q9BZ97 58 aa6.48□□□□□ -1.37
NUDCD3-211ENST00000497978 C3orf79P0CE67 100 aa6.47□□□□□ -1.37
NUDCD3-211ENST00000497978 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 TEX49A0A1B0GTD5 131 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 KRTDAPP60985 99 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 CD164Q04900 197 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 Q1RN00 199 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 KRTAP9-9Q9BYP9 154 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 KRTAP9-4Q9BYQ2 154 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 PRO1933Q9H354 126 aa6.46□□□□□ -1.38
NUDCD3-211ENST00000497978 A0A1B0GWB2 263 aa6.45□□□□□ -1.38
NUDCD3-211ENST00000497978 C20orf202A1L168 122 aa6.45□□□□□ -1.38
NUDCD3-211ENST00000497978 A6NDN8 102 aa6.44□□□□□ -1.38
NUDCD3-211ENST00000497978 H7C2G1 150 aa6.44□□□□□ -1.38
NUDCD3-211ENST00000497978 IFITM1P13164 125 aa6.44□□□□□ -1.38
NUDCD3-211ENST00000497978 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
NUDCD3-211ENST00000497978 AKR1D1P51857 326 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 344.9 ms