RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 TRACP01848 142 aa12.72□□□□□ -0.37
ACTN4-208ENST00000497637 RPL18AQ02543 176 aaKnown RBP12.72□□□□□ -0.37
ACTN4-208ENST00000497637 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
ACTN4-208ENST00000497637 LOC107984640A0A0U1RRK4 108 aa12.71□□□□□ -0.37
ACTN4-208ENST00000497637 M0R378 163 aa12.71□□□□□ -0.37
ACTN4-208ENST00000497637 SLC25A20O43772 301 aa12.71□□□□□ -0.37
ACTN4-208ENST00000497637 PLA2G2DQ9UNK4 145 aa12.71□□□□□ -0.37
ACTN4-208ENST00000497637 LRCOL1A6NCL2 159 aa12.7□□□□□ -0.38
ACTN4-208ENST00000497637 KRTAP29-1A8MX34 341 aaPredicted RBP12.7□□□□□ -0.38
ACTN4-208ENST00000497637 FAM218AQ96MZ4 157 aa12.69□□□□□ -0.38
ACTN4-208ENST00000497637 SMR3BP02814 79 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-208ENST00000497637 ETDBQ3ZM63 59 aa12.68□□□□□ -0.38
ACTN4-208ENST00000497637 ANKRD29Q8N6D5 301 aa12.68□□□□□ -0.38
ACTN4-208ENST00000497637 TRBV10-3A0A0K0K1G6 114 aa12.67□□□□□ -0.38
ACTN4-208ENST00000497637 H3BT86 120 aa12.67□□□□□ -0.38
ACTN4-208ENST00000497637 OCIAD2Q56VL3 154 aa12.67□□□□□ -0.38
ACTN4-208ENST00000497637 IGLV5-37A0A075B6J1 123 aa12.66□□□□□ -0.38
ACTN4-208ENST00000497637 GAGE2BQ13066 116 aa12.65□□□□□ -0.38
ACTN4-208ENST00000497637 CBY1Q9Y3M2 126 aa12.65□□□□□ -0.38
ACTN4-208ENST00000497637 A0A1B0GX51 115 aa12.64□□□□□ -0.39
ACTN4-208ENST00000497637 C6orf99Q4VX62 202 aa12.63□□□□□ -0.39
ACTN4-208ENST00000497637 TEN1Q86WV5 123 aa12.63□□□□□ -0.39
ACTN4-208ENST00000497637 A0A087WYN8 130 aa12.62□□□□□ -0.39
ACTN4-208ENST00000497637 TRAV23DV6A0A075B6W5 121 aa12.61□□□□□ -0.39
ACTN4-208ENST00000497637 K7ERU9 68 aa12.61□□□□□ -0.39
ACTN4-208ENST00000497637 KRTAP10-1P60331 282 aa12.61□□□□□ -0.39
ACTN4-208ENST00000497637 NKAPP1Q8N9T2 125 aa12.61□□□□□ -0.39
ACTN4-208ENST00000497637 PKIGQ9Y2B9 76 aa12.6□□□□□ -0.39
ACTN4-208ENST00000497637 TRBV7-6A0A0J9YX20 115 aa12.59□□□□□ -0.39
ACTN4-208ENST00000497637 BAALC-AS2P0C853 105 aa12.59□□□□□ -0.39
ACTN4-208ENST00000497637 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
ACTN4-208ENST00000497637 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-208ENST00000497637 C7orf33Q8WU49 177 aa12.58□□□□□ -0.4
ACTN4-208ENST00000497637 PPDPFLQ8WWR9 84 aa12.58□□□□□ -0.4
ACTN4-208ENST00000497637 LINC00167Q96N53 147 aa12.58□□□□□ -0.4
ACTN4-208ENST00000497637 ZNF73O43830 326 aaPredicted RBP12.57□□□□□ -0.4
ACTN4-208ENST00000497637 LINC00575Q6W349 94 aa12.57□□□□□ -0.4
ACTN4-208ENST00000497637 C9orf163Q8N9P6 203 aa12.57□□□□□ -0.4
ACTN4-208ENST00000497637 A0A087WTM6 91 aa12.56□□□□□ -0.4
ACTN4-208ENST00000497637 DNAL4O96015 105 aa12.56□□□□□ -0.4
ACTN4-208ENST00000497637 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
ACTN4-208ENST00000497637 KRTAP7-1Q8IUC3 87 aa12.56□□□□□ -0.4
ACTN4-208ENST00000497637 Q8N814 137 aa12.56□□□□□ -0.4
ACTN4-208ENST00000497637 FAM168BA1KXE4 195 aa12.55□□□□□ -0.4
ACTN4-208ENST00000497637 SNCGO76070 127 aa12.55□□□□□ -0.4
ACTN4-208ENST00000497637 PLA2G1BP04054 148 aaKnown RBP12.55□□□□□ -0.4
ACTN4-208ENST00000497637 KCNQ1DNQ9H478 68 aa12.55□□□□□ -0.4
ACTN4-208ENST00000497637 A0A096LNI7 61 aa12.54□□□□□ -0.4
ACTN4-208ENST00000497637 J3QR89 54 aa12.54□□□□□ -0.4
ACTN4-208ENST00000497637 C22orf24Q9Y442 160 aa12.54□□□□□ -0.4
ACTN4-208ENST00000497637 COX7BP24311 80 aa12.53□□□□□ -0.4
ACTN4-208ENST00000497637 IGLV1-50A0A075B6I6 118 aa12.5□□□□□ -0.41
ACTN4-208ENST00000497637 hADV29S1A0JD25 119 aa12.5□□□□□ -0.41
ACTN4-208ENST00000497637 PRYO14603 147 aa12.5□□□□□ -0.41
ACTN4-208ENST00000497637 ELOF1P60002 83 aaKnown RBP12.5□□□□□ -0.41
ACTN4-208ENST00000497637 SDIM1Q6ZPB5 146 aa12.5□□□□□ -0.41
ACTN4-208ENST00000497637 FAM19A5Q7Z5A7 132 aaPredicted RBP12.5□□□□□ -0.41
ACTN4-208ENST00000497637 ORMDL1Q9P0S3 153 aa12.5□□□□□ -0.41
ACTN4-208ENST00000497637 MRPL55Q7Z7F7 128 aaKnown RBP12.49□□□□□ -0.41
ACTN4-208ENST00000497637 IGKV2-24A0A0C4DH68 120 aa12.48□□□□□ -0.41
ACTN4-208ENST00000497637 A0A1W2PNN7 141 aa12.47□□□□□ -0.41
ACTN4-208ENST00000497637 OXTP01178 125 aa12.47□□□□□ -0.41
ACTN4-208ENST00000497637 RNF213Q63HN8 5207 aa12.47□□□□□ -0.41
ACTN4-208ENST00000497637 TEX49A0A1B0GTD5 131 aa12.46□□□□□ -0.41
ACTN4-208ENST00000497637 LINC00528Q8N1L1 170 aa12.46□□□□□ -0.41
ACTN4-208ENST00000497637 LINC00474Q9P2X8 69 aa12.46□□□□□ -0.41
ACTN4-208ENST00000497637 SPRR1AP35321 89 aa12.45□□□□□ -0.42
ACTN4-208ENST00000497637 HAMPP81172 84 aa12.45□□□□□ -0.42
ACTN4-208ENST00000497637 RPL37AP8A6NKH3 93 aa12.44□□□□□ -0.42
ACTN4-208ENST00000497637 H3BQ85 93 aa12.43□□□□□ -0.42
ACTN4-208ENST00000497637 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.43□□□□□ -0.42
ACTN4-208ENST00000497637 KRTAP4-16G5E9R7 235 aaPredicted RBP12.42□□□□□ -0.42
ACTN4-208ENST00000497637 CHTF8P0CG12 524 aa12.42□□□□□ -0.42
ACTN4-208ENST00000497637 TMEM256-PLSCR3K7ERE1 68 aa12.41□□□□□ -0.42
ACTN4-208ENST00000497637 OBSCN-AS1Q96MR7 158 aa12.4□□□□□ -0.42
ACTN4-208ENST00000497637 LRP1Q07954 4544 aaKnown RBP12.39□□□□□ -0.43
ACTN4-208ENST00000497637 IGLV5-52A0A0A0MRZ9 124 aa12.38□□□□□ -0.43
ACTN4-208ENST00000497637 B5MCH6 92 aa12.38□□□□□ -0.43
ACTN4-208ENST00000497637 Q6ZQY7 126 aa12.38□□□□□ -0.43
ACTN4-208ENST00000497637 ETDCA0A1B0GVM5 59 aa12.37□□□□□ -0.43
ACTN4-208ENST00000497637 GHRHP01286 108 aa12.37□□□□□ -0.43
ACTN4-208ENST00000497637 REG3GQ6UW15 175 aa12.37□□□□□ -0.43
ACTN4-208ENST00000497637 VPS25Q9BRG1 176 aa12.36□□□□□ -0.43
ACTN4-208ENST00000497637 DHRS4-AS1Q9P1J3 65 aa12.36□□□□□ -0.43
ACTN4-208ENST00000497637 Q6ZRX8 168 aa12.35□□□□□ -0.43
ACTN4-208ENST00000497637 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
ACTN4-208ENST00000497637 PANO1I0J062 215 aa12.33□□□□□ -0.44
ACTN4-208ENST00000497637 PHF5AQ7RTV0 110 aaKnown RBP12.33□□□□□ -0.44
ACTN4-208ENST00000497637 JMJD7-PLA2G4BH0Y9G9 81 aa12.32□□□□□ -0.44
ACTN4-208ENST00000497637 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.32□□□□□ -0.44
ACTN4-208ENST00000497637 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
ACTN4-208ENST00000497637 FAM30AQ9NZY2 134 aa12.3□□□□□ -0.44
ACTN4-208ENST00000497637 FAM240AA0A1B0GVK7 77 aa12.29□□□□□ -0.44
ACTN4-208ENST00000497637 Q9BRP9 147 aa12.29□□□□□ -0.44
ACTN4-208ENST00000497637 CDIP1Q9H305 208 aa12.29□□□□□ -0.44
ACTN4-208ENST00000497637 UBE2BP63146 152 aa12.28□□□□□ -0.44
ACTN4-208ENST00000497637 C14orf132Q9NPU4 83 aa12.27□□□□□ -0.45
ACTN4-208ENST00000497637 ACYP1P07311 99 aa12.26□□□□□ -0.45
ACTN4-208ENST00000497637 KRTAP11-1Q8IUC1 163 aa12.26□□□□□ -0.45
ACTN4-208ENST00000497637 FAT3Q8TDW7 4589 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms