RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 LINC00612Q8N6U2 182 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 C11orf72Q8NBR9 251 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 C16orf74Q96GX8 76 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 DNAH6Q9C0G6 4158 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 A0A087WVE0 104 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 JMJD7-PLA2G4BH0Y9G9 81 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 HTN1P15515 57 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
CSMD3-208ENST00000497026 DAD1P61803 113 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 KLKP1Q107X0 134 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 LINC00467Q9BRT7 94 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 UBL5Q9BZL1 73 aa3.36□□□□□ -1.87
CSMD3-208ENST00000497026 TRAV23DV6A0A075B6W5 121 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 A0A0U1RQV1 116 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 H7BZZ5 65 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 DEFB130BP0DP73 79 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 DEFB130AP0DP74 79 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 HTN3P15516 51 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 ADAMTSL4-AS1Q5T5F5 129 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 OBSCN-AS1Q96MR7 158 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 NOP10Q9NPE3 64 aaKnown RBP3.35□□□□□ -1.87
CSMD3-208ENST00000497026 C14orf132Q9NPU4 83 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 LINC00846Q9NV44 126 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 KIF25-AS1Q9Y6Z4 181 aa3.35□□□□□ -1.87
CSMD3-208ENST00000497026 FRAS1Q86XX4 4008 aa3.34□□□□□ -1.87
CSMD3-208ENST00000497026 TRBV7-6A0A0J9YX20 115 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 F8WEM9 126 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 CCKP06307 115 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 RNASE3P12724 160 aaKnown RBP3.34□□□□□ -1.88
CSMD3-208ENST00000497026 CD164Q04900 197 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 FAM74A4Q5TZK3 123 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 Q6ZTI0 123 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 PRR15Q8IV56 129 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 ORMDL1Q9P0S3 153 aa3.34□□□□□ -1.88
CSMD3-208ENST00000497026 IGHV1OR15-1A0A075B7D0 117 aa3.33□□□□□ -1.88
CSMD3-208ENST00000497026 LINC00315P59091 139 aa3.33□□□□□ -1.88
CSMD3-208ENST00000497026 PMAIP1Q13794 54 aa3.33□□□□□ -1.88
CSMD3-208ENST00000497026 FP248Q71RG6 208 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-208ENST00000497026 OPRPNQ99935 248 aaPredicted RBP3.33□□□□□ -1.88
CSMD3-208ENST00000497026 FAT2Q9NYQ8 4349 aa3.33□□□□□ -1.88
CSMD3-208ENST00000497026 DNAH2Q9P225 4427 aa3.33□□□□□ -1.88
CSMD3-208ENST00000497026 BIRC6Q9NR09 4857 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 IGLV5-45A0A087WSX0 123 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 SMIM1B2RUZ4 78 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 M0QY20 66 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 LCE3CQ5T5A8 94 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 Q9H8V8 135 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 Q9HAA7 133 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 DNAH10Q8IVF4 4471 aa3.32□□□□□ -1.88
CSMD3-208ENST00000497026 TRGV1A0A0A0MS02 117 aa3.31□□□□□ -1.88
CSMD3-208ENST00000497026 A0A0U1RRA0 63 aa3.31□□□□□ -1.88
CSMD3-208ENST00000497026 GNRH2O43555 120 aa3.31□□□□□ -1.88
CSMD3-208ENST00000497026 ERC2-IT1O76042 136 aa3.31□□□□□ -1.88
CSMD3-208ENST00000497026 MRPL55Q7Z7F7 128 aaKnown RBP3.31□□□□□ -1.88
CSMD3-208ENST00000497026 FAM218AQ96MZ4 157 aa3.31□□□□□ -1.88
CSMD3-208ENST00000497026 C22orf24Q9Y442 160 aa3.31□□□□□ -1.88
CSMD3-208ENST00000497026 TRGV2A0A075B6R0 118 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 H3BNG1 76 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 H3BQ85 93 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 IGHV3-53P01767 116 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 ESRGQ1W209 222 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 LYPD5Q6UWN5 251 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 ENHOQ6UWT2 76 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 Q6ZR54 194 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 Q6ZRU5 148 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 UBE2DNLQ8IWF7 75 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 LINC00588Q9Y4M8 146 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 DNAH17Q9UFH2 4485 aa3.3□□□□□ -1.88
CSMD3-208ENST00000497026 A0A096LPF7 62 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 IBA57-AS1B1ANH7 110 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 TMEM256-PLSCR3K7ERE1 68 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 M0R2N4 97 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 NCR3O14931 201 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 LECT2O14960 151 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 RTL8CO15255 209 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 CXCL6P80162 114 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 FAM19A1Q7Z5A9 133 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 SND1-IT1Q9HBX3 110 aa3.29□□□□□ -1.88
CSMD3-208ENST00000497026 A0A1B0GVY2 172 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 FUSP35637 526 aaKnown RBP eCLIP3.28□□□□□ -1.88
CSMD3-208ENST00000497026 SOSTDC1Q6X4U4 206 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 NOTCH2NLQ7Z3S9 236 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 FAM19A3Q7Z5A8 133 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 MIR7-3HGQ8N6C7 128 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 SMIM11BQ8TCY0 68 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 RMI2Q96E14 147 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 CDKN2A-AS1Q9UH64 79 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 PRO0255Q9UI72 69 aa3.28□□□□□ -1.88
CSMD3-208ENST00000497026 LOC100131303A0A0U1RQF7 123 aa3.27□□□□□ -1.89
CSMD3-208ENST00000497026 NBDYA0A0U1RRE5 68 aa3.27□□□□□ -1.89
CSMD3-208ENST00000497026 PDE6GP18545 87 aa3.27□□□□□ -1.89
CSMD3-208ENST00000497026 CCL18P55774 89 aa3.27□□□□□ -1.89
CSMD3-208ENST00000497026 NREPQ16612 68 aa3.27□□□□□ -1.89
CSMD3-208ENST00000497026 DEFB104AQ8WTQ1 72 aa3.27□□□□□ -1.89
CSMD3-208ENST00000497026 ZNF625Q96I27 306 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-208ENST00000497026 LINC00167Q96N53 147 aa3.27□□□□□ -1.89
CSMD3-208ENST00000497026 SNURFQ9Y675 71 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms