RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 C1orf134Q5TEV5 83 aa10.99□□□□□ -0.65
LMNA-216ENST00000496738 LST1O00453 97 aa10.97□□□□□ -0.65
LMNA-216ENST00000496738 NDUFC2O95298 119 aa10.97□□□□□ -0.65
LMNA-216ENST00000496738 Q6ZRP5 223 aa10.97□□□□□ -0.65
LMNA-216ENST00000496738 SERP1Q9Y6X1 66 aa10.97□□□□□ -0.65
LMNA-216ENST00000496738 COX6CP09669 75 aa10.95□□□□□ -0.66
LMNA-216ENST00000496738 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
LMNA-216ENST00000496738 C14orf177Q52M58 125 aa10.95□□□□□ -0.66
LMNA-216ENST00000496738 Q8NDZ9 215 aa10.95□□□□□ -0.66
LMNA-216ENST00000496738 ALMS1Q8TCU4 4167 aa10.95□□□□□ -0.66
LMNA-216ENST00000496738 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
LMNA-216ENST00000496738 IGKV2-28A0A075B6P5 120 aa10.93□□□□□ -0.66
LMNA-216ENST00000496738 A0A087WTM6 91 aa10.93□□□□□ -0.66
LMNA-216ENST00000496738 IGKV2D-28P01615 120 aa10.93□□□□□ -0.66
LMNA-216ENST00000496738 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.66
LMNA-216ENST00000496738 A0A0U1RQV1 116 aa10.93□□□□□ -0.66
LMNA-216ENST00000496738 Q8N814 137 aa10.93□□□□□ -0.66
LMNA-216ENST00000496738 HYDINQ4G0P3 5121 aa10.92□□□□□ -0.66
LMNA-216ENST00000496738 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
LMNA-216ENST00000496738 NCR3O14931 201 aa10.91□□□□□ -0.66
LMNA-216ENST00000496738 CLEC2BQ92478 149 aa10.91□□□□□ -0.66
LMNA-216ENST00000496738 SMIM26A0A096LP01 95 aa10.9□□□□□ -0.66
LMNA-216ENST00000496738 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.66
LMNA-216ENST00000496738 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
LMNA-216ENST00000496738 BRK1Q8WUW1 75 aa10.9□□□□□ -0.66
LMNA-216ENST00000496738 C9orf129Q5T035 196 aaKnown RBP10.89□□□□□ -0.67
LMNA-216ENST00000496738 TNP2Q05952 138 aa10.88□□□□□ -0.67
LMNA-216ENST00000496738 TLX1NBP0CAT3 122 aa10.88□□□□□ -0.67
LMNA-216ENST00000496738 RTL8CO15255 209 aa10.87□□□□□ -0.67
LMNA-216ENST00000496738 LCE6AA0A183 80 aa10.87□□□□□ -0.67
LMNA-216ENST00000496738 DNAH2Q9P225 4427 aa10.86□□□□□ -0.67
LMNA-216ENST00000496738 IGKV2-24A0A0C4DH68 120 aa10.86□□□□□ -0.67
LMNA-216ENST00000496738 A0A096LNI7 61 aa10.85□□□□□ -0.67
LMNA-216ENST00000496738 TRAV13-2A0A0B4J235 113 aa10.85□□□□□ -0.67
LMNA-216ENST00000496738 FAM168BA1KXE4 195 aa10.85□□□□□ -0.67
LMNA-216ENST00000496738 SERTAD4-AS1Q5TG53 156 aa10.84□□□□□ -0.67
LMNA-216ENST00000496738 C9orf163Q8N9P6 203 aa10.84□□□□□ -0.67
LMNA-216ENST00000496738 DNAH6Q9C0G6 4158 aa10.83□□□□□ -0.68
LMNA-216ENST00000496738 VPREB1P12018 145 aa10.83□□□□□ -0.68
LMNA-216ENST00000496738 Q6JHZ5 121 aa10.83□□□□□ -0.68
LMNA-216ENST00000496738 CHTF8P0CG12 524 aa10.82□□□□□ -0.68
LMNA-216ENST00000496738 PMAIP1Q13794 54 aa10.81□□□□□ -0.68
LMNA-216ENST00000496738 S100A7L2Q5SY68 101 aa10.81□□□□□ -0.68
LMNA-216ENST00000496738 INAFM2P0DMQ5 153 aa10.8□□□□□ -0.68
LMNA-216ENST00000496738 C16orf90A8MZG2 172 aa10.79□□□□□ -0.68
LMNA-216ENST00000496738 A0A087WVE0 104 aa10.79□□□□□ -0.68
LMNA-216ENST00000496738 SMIM11BQ8TCY0 68 aa10.79□□□□□ -0.68
LMNA-216ENST00000496738 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
LMNA-216ENST00000496738 IGLV5-52A0A0A0MRZ9 124 aa10.78□□□□□ -0.68
LMNA-216ENST00000496738 H7BZZ5 65 aa10.78□□□□□ -0.68
LMNA-216ENST00000496738 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
LMNA-216ENST00000496738 TRBV10-3A0A0K0K1G6 114 aa10.77□□□□□ -0.69
LMNA-216ENST00000496738 PANO1I0J062 215 aa10.76□□□□□ -0.69
LMNA-216ENST00000496738 RPL28P46779 137 aaKnown RBP10.76□□□□□ -0.69
LMNA-216ENST00000496738 KRTAP10-2P60368 255 aa10.76□□□□□ -0.69
LMNA-216ENST00000496738 CD164Q04900 197 aa10.76□□□□□ -0.69
LMNA-216ENST00000496738 C22orf24Q9Y442 160 aa10.76□□□□□ -0.69
LMNA-216ENST00000496738 IGKV3D-7A0A0C4DH55 119 aa10.75□□□□□ -0.69
LMNA-216ENST00000496738 M0R378 163 aa10.75□□□□□ -0.69
LMNA-216ENST00000496738 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
LMNA-216ENST00000496738 IGLV6-57P01721 117 aa10.74□□□□□ -0.69
LMNA-216ENST00000496738 C20orf197Q8N268 126 aa10.74□□□□□ -0.69
LMNA-216ENST00000496738 C7orf33Q8WU49 177 aa10.74□□□□□ -0.69
LMNA-216ENST00000496738 PLA2G2DQ9UNK4 145 aa10.74□□□□□ -0.69
LMNA-216ENST00000496738 FRAS1Q86XX4 4008 aa10.74□□□□□ -0.69
LMNA-216ENST00000496738 SACSQ9NZJ4 4579 aa10.73□□□□□ -0.69
LMNA-216ENST00000496738 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.73□□□□□ -0.69
LMNA-216ENST00000496738 DNAH17Q9UFH2 4485 aa10.73□□□□□ -0.69
LMNA-216ENST00000496738 RPL37AP8A6NKH3 93 aa10.72□□□□□ -0.69
LMNA-216ENST00000496738 GHRHP01286 108 aa10.72□□□□□ -0.69
LMNA-216ENST00000496738 LINC00474Q9P2X8 69 aa10.72□□□□□ -0.69
LMNA-216ENST00000496738 BAALC-AS2P0C853 105 aa10.71□□□□□ -0.69
LMNA-216ENST00000496738 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
LMNA-216ENST00000496738 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
LMNA-216ENST00000496738 C6orf99Q4VX62 202 aa10.7□□□□□ -0.7
LMNA-216ENST00000496738 FAM218AQ96MZ4 157 aa10.7□□□□□ -0.7
LMNA-216ENST00000496738 CCKP06307 115 aa10.69□□□□□ -0.7
LMNA-216ENST00000496738 MRPL55Q7Z7F7 128 aaKnown RBP10.69□□□□□ -0.7
LMNA-216ENST00000496738 LINC00167Q96N53 147 aa10.69□□□□□ -0.7
LMNA-216ENST00000496738 PRR15Q8IV56 129 aa10.69□□□□□ -0.7
LMNA-216ENST00000496738 DNAL4O96015 105 aa10.68□□□□□ -0.7
LMNA-216ENST00000496738 RYR2Q92736 4967 aa10.68□□□□□ -0.7
LMNA-216ENST00000496738 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
LMNA-216ENST00000496738 KMT2CQ8NEZ4 4911 aaKnown RBP10.68□□□□□ -0.7
LMNA-216ENST00000496738 TRBV7-6A0A0J9YX20 115 aa10.67□□□□□ -0.7
LMNA-216ENST00000496738 LINC00846Q9NV44 126 aa10.67□□□□□ -0.7
LMNA-216ENST00000496738 HECTD4Q9Y4D8 3996 aa10.67□□□□□ -0.7
LMNA-216ENST00000496738 KLKP1Q107X0 134 aa10.67□□□□□ -0.7
LMNA-216ENST00000496738 PHF5AQ7RTV0 110 aaKnown RBP10.66□□□□□ -0.7
LMNA-216ENST00000496738 ZNF73O43830 326 aaPredicted RBP10.66□□□□□ -0.7
LMNA-216ENST00000496738 H0YGX0 51 aa10.65□□□□□ -0.71
LMNA-216ENST00000496738 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
LMNA-216ENST00000496738 A0A087WYN8 130 aa10.64□□□□□ -0.71
LMNA-216ENST00000496738 DIRC1Q969H9 104 aa10.64□□□□□ -0.71
LMNA-216ENST00000496738 FAT2Q9NYQ8 4349 aa10.62□□□□□ -0.71
LMNA-216ENST00000496738 KCNQ1DNQ9H478 68 aa10.62□□□□□ -0.71
LMNA-216ENST00000496738 ATP5EP56381 51 aaPredicted RBP10.62□□□□□ -0.71
LMNA-216ENST00000496738 RBM3P98179 157 aaKnown RBP10.62□□□□□ -0.71
LMNA-216ENST00000496738 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
LMNA-216ENST00000496738 KRTAP11-1Q8IUC1 163 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms