RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 H3BRM9 83 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 UBE2L6O14933 153 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 APCSP02743 223 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 BCL2P10415 239 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 XCL1P47992 114 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 HINT1P49773 126 aaPredicted RBP2.5□□□□□ -2.01
VPS52-222ENST00000495981 SPATA45Q537H7 98 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 LYZL1Q6UWQ5 148 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 BORCS7Q96B45 105 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 PLEKHB2Q96CS7 222 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 RNASE7Q9H1E1 156 aaKnown RBP2.5□□□□□ -2.01
VPS52-222ENST00000495981 RBM12B-AS1Q9P1G2 102 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 GNG13Q9P2W3 67 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 LINC00474Q9P2X8 69 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 PSORS1C2Q9UIG4 136 aa2.5□□□□□ -2.01
VPS52-222ENST00000495981 TRBV6-5A0A0K0K1A5 114 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 SDHAF1A6NFY7 115 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 F2Z2F3 143 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 BPY2O14599 106 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 APOMO95445 188 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 IFITM1P13164 125 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 FOXA3P55318 350 aaPredicted RBP2.49□□□□□ -2.01
VPS52-222ENST00000495981 C9orf116Q5BN46 136 aaPredicted RBP2.49□□□□□ -2.01
VPS52-222ENST00000495981 MEIG1Q5JSS6 88 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 C1orf195Q5TG92 126 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 NUP35Q8NFH5 326 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 PMCHL2Q9BQD1 86 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 TMEM191AQ9H0A3 160 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 PKIGQ9Y2B9 76 aa2.49□□□□□ -2.01
VPS52-222ENST00000495981 IGLV4-69A0A075B6H9 119 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 TRBV27A0A0K0K1C4 114 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 LOC107984640A0A0U1RRK4 108 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 FAM231DQ6ZW35 169 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 PHF5AQ7RTV0 110 aaKnown RBP2.48□□□□□ -2.01
VPS52-222ENST00000495981 ATOH7Q8N100 152 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 C18orf32Q8TCD1 76 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 SND1-IT1Q9HBX3 110 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 CDC42SE2Q9NRR3 84 aa2.48□□□□□ -2.01
VPS52-222ENST00000495981 TRAV9-1A0A075B6T8 112 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 A0A1W2PPM0 123 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 C8orf87E5RJ46 101 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 I3L3M4 83 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 MT-ATP8P03928 68 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 IGLV7-43P04211 117 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 FABP2P12104 132 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 PSMB2P49721 201 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 SPAG11BQ08648 103 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 Q5W150 140 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 Q5XG85 94 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 DPH3Q96FX2 82 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 UBE2D4Q9Y2X8 147 aa2.47□□□□□ -2.01
VPS52-222ENST00000495981 ZNF727A8MUV8 499 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 H3BMG7 143 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 COX7A2LO14548 114 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 MT-ND6P03923 174 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 SRP19P09132 144 aaKnown RBP2.46□□□□□ -2.02
VPS52-222ENST00000495981 POLR2KP53803 58 aaKnown RBP2.46□□□□□ -2.02
VPS52-222ENST00000495981 KRTAP10-6P60371 365 aaPredicted RBP2.46□□□□□ -2.02
VPS52-222ENST00000495981 C1orf137Q5JT78 98 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 DIRC1Q969H9 104 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 KRTAP4-1Q9BYQ7 146 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 EIF5A2Q9GZV4 153 aaKnown RBP2.46□□□□□ -2.02
VPS52-222ENST00000495981 MRPL35Q9NZE8 188 aaKnown RBP2.46□□□□□ -2.02
VPS52-222ENST00000495981 SPCS1Q9Y6A9 102 aa2.46□□□□□ -2.02
VPS52-222ENST00000495981 LOC389332A0A1B0GUA5 103 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 TMEM223A0PJW6 202 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 UQCRQO14949 82 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 NDUFC2O95298 119 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 TMEM258P61165 79 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 SS18Q15532 418 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 DEFB116Q30KQ4 102 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 SLC25A34Q6PIV7 304 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 AMN1Q8IY45 258 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 NAA38Q9BRA0 125 aaKnown RBP2.45□□□□□ -2.02
VPS52-222ENST00000495981 C6orf48Q9UBA6 75 aa2.45□□□□□ -2.02
VPS52-222ENST00000495981 TRAV13-1A0A0B4J241 112 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 FAM236DA0A1B0GTK5 79 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 HIGD1CA8MV81 97 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 SYS1-DBNDD2H3BUS1 97 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 DPM2O94777 84 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 FAM236CP0DP71 79 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 CRYGAP11844 174 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 HERVK_113P63121 156 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 PMAIP1Q13794 54 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 C3orf22Q8N5N4 141 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 TIMM21Q9BVV7 248 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 IMUPQ9GZP8 106 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 LAMTOR3Q9UHA4 124 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 PRO0461Q9UI25 63 aa2.44□□□□□ -2.02
VPS52-222ENST00000495981 FLGP20930 4061 aaPredicted RBP2.43□□□□□ -2.02
VPS52-222ENST00000495981 A0A1B0GUT8 65 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 A8MWL6 223 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 J3QQQ9 107 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 NUPR1O60356 82 aa2.43□□□□□ -2.02
VPS52-222ENST00000495981 KRTAP10-7P60409 375 aaPredicted RBP2.43□□□□□ -2.02
VPS52-222ENST00000495981 RPL39P62891 51 aaKnown RBP2.43□□□□□ -2.02
VPS52-222ENST00000495981 HRCT1Q6UXD1 115 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms