RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 A0A0U1RRA0 63 aa7.18□□□□□ -1.26
COL1A1-209ENST00000495677 C9orf92A6NGG3 77 aa7.18□□□□□ -1.26
COL1A1-209ENST00000495677 NCR3O14931 201 aa7.18□□□□□ -1.26
COL1A1-209ENST00000495677 Q6ZRX8 168 aa7.18□□□□□ -1.26
COL1A1-209ENST00000495677 LIMD2Q9BT23 127 aa7.18□□□□□ -1.26
COL1A1-209ENST00000495677 HSPB8Q9UJY1 196 aa7.18□□□□□ -1.26
COL1A1-209ENST00000495677 TRAV12-1A0A0B4J245 112 aa7.17□□□□□ -1.26
COL1A1-209ENST00000495677 C5orf52A6NGY3 159 aa7.17□□□□□ -1.26
COL1A1-209ENST00000495677 SMIM13P0DJ93 91 aa7.17□□□□□ -1.26
COL1A1-209ENST00000495677 C9orf153Q5TBE3 101 aa7.17□□□□□ -1.26
COL1A1-209ENST00000495677 COX6B2Q6YFQ2 88 aa7.17□□□□□ -1.26
COL1A1-209ENST00000495677 PMCHL2Q9BQD1 86 aa7.17□□□□□ -1.26
COL1A1-209ENST00000495677 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
COL1A1-209ENST00000495677 LINC00587B1AMM8 73 aa7.16□□□□□ -1.26
COL1A1-209ENST00000495677 IGLV6-57P01721 117 aa7.16□□□□□ -1.26
COL1A1-209ENST00000495677 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
COL1A1-209ENST00000495677 MIR7-3HGQ8N6C7 128 aa7.16□□□□□ -1.26
COL1A1-209ENST00000495677 TRBV10-2A0A0K0K1G8 114 aa7.14□□□□□ -1.27
COL1A1-209ENST00000495677 HERV-K104P63124 156 aa7.14□□□□□ -1.27
COL1A1-209ENST00000495677 JOSD1Q15040 202 aaPredicted RBP7.14□□□□□ -1.27
COL1A1-209ENST00000495677 MAP1LC3CQ9BXW4 147 aa7.14□□□□□ -1.27
COL1A1-209ENST00000495677 TMEM223A0PJW6 202 aa7.13□□□□□ -1.27
COL1A1-209ENST00000495677 DDTP30046 118 aa7.13□□□□□ -1.27
COL1A1-209ENST00000495677 KRTAP3-3Q9BYR6 98 aa7.13□□□□□ -1.27
COL1A1-209ENST00000495677 KRTAP3-2Q9BYR7 98 aa7.13□□□□□ -1.27
COL1A1-209ENST00000495677 DPM2O94777 84 aa7.12□□□□□ -1.27
COL1A1-209ENST00000495677 PLNP26678 52 aa7.12□□□□□ -1.27
COL1A1-209ENST00000495677 RPL37P61927 97 aaKnown RBP7.12□□□□□ -1.27
COL1A1-209ENST00000495677 MEIG1Q5JSS6 88 aa7.12□□□□□ -1.27
COL1A1-209ENST00000495677 CFC1P0CG37 223 aa7.11□□□□□ -1.27
COL1A1-209ENST00000495677 IGKCP01834 107 aa7.1□□□□□ -1.27
COL1A1-209ENST00000495677 SPRR1BP22528 89 aa7.1□□□□□ -1.27
COL1A1-209ENST00000495677 KRTDAPP60985 99 aa7.1□□□□□ -1.27
COL1A1-209ENST00000495677 SSPOA2VEC9 5147 aa7.09□□□□□ -1.27
COL1A1-209ENST00000495677 HERVK_113P61574 105 aa7.09□□□□□ -1.27
COL1A1-209ENST00000495677 CD164Q04900 197 aa7.09□□□□□ -1.27
COL1A1-209ENST00000495677 Q5XG85 94 aa7.09□□□□□ -1.27
COL1A1-209ENST00000495677 SYS1-DBNDD2H3BUS1 97 aa7.08□□□□□ -1.28
COL1A1-209ENST00000495677 TSPEAR-AS2P59090 65 aa7.08□□□□□ -1.28
COL1A1-209ENST00000495677 SLC25A34Q6PIV7 304 aa7.08□□□□□ -1.28
COL1A1-209ENST00000495677 ST20-AS1Q8NBB2 130 aa7.08□□□□□ -1.28
COL1A1-209ENST00000495677 LEPROTO15243 131 aa7.06□□□□□ -1.28
COL1A1-209ENST00000495677 NDUFC2O95298 119 aa7.06□□□□□ -1.28
COL1A1-209ENST00000495677 C3orf79P0CE67 100 aa7.06□□□□□ -1.28
COL1A1-209ENST00000495677 LGALS3P17931 250 aaKnown RBP7.06□□□□□ -1.28
COL1A1-209ENST00000495677 COA6Q5JTJ3 125 aaKnown RBP7.06□□□□□ -1.28
COL1A1-209ENST00000495677 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
COL1A1-209ENST00000495677 KRTAP9-8Q9BYQ0 159 aa7.06□□□□□ -1.28
COL1A1-209ENST00000495677 SPANXB1Q9NS25 103 aaPredicted RBP7.06□□□□□ -1.28
COL1A1-209ENST00000495677 MYMXA0A1B0GTQ4 84 aa7.05□□□□□ -1.28
COL1A1-209ENST00000495677 S100A6P06703 90 aa7.05□□□□□ -1.28
COL1A1-209ENST00000495677 S100A2P29034 98 aa7.05□□□□□ -1.28
COL1A1-209ENST00000495677 USH2AO75445 5202 aa7.05□□□□□ -1.28
COL1A1-209ENST00000495677 TRAV23DV6A0A075B6W5 121 aa7.04□□□□□ -1.28
COL1A1-209ENST00000495677 C20orf202A1L168 122 aa7.04□□□□□ -1.28
COL1A1-209ENST00000495677 J3QQQ9 107 aa7.04□□□□□ -1.28
COL1A1-209ENST00000495677 S100A7L2Q5SY68 101 aa7.04□□□□□ -1.28
COL1A1-209ENST00000495677 LINC01545Q5VT33 79 aa7.04□□□□□ -1.28
COL1A1-209ENST00000495677 PET117Q6UWS5 81 aa7.04□□□□□ -1.28
COL1A1-209ENST00000495677 ZNF73O43830 326 aaPredicted RBP7.03□□□□□ -1.28
COL1A1-209ENST00000495677 C1orf195Q5TG92 126 aa7.03□□□□□ -1.28
COL1A1-209ENST00000495677 ATOH7Q8N100 152 aa7.03□□□□□ -1.28
COL1A1-209ENST00000495677 LAMTOR3Q9UHA4 124 aa7.03□□□□□ -1.28
COL1A1-209ENST00000495677 FCGBPQ9Y6R7 5405 aaPredicted RBP7.02□□□□□ -1.29
COL1A1-209ENST00000495677 HIST3H2BBQ8N257 126 aa7.02□□□□□ -1.29
COL1A1-209ENST00000495677 HINT1P49773 126 aaPredicted RBP7.01□□□□□ -1.29
COL1A1-209ENST00000495677 CBY1Q9Y3M2 126 aa7.01□□□□□ -1.29
COL1A1-209ENST00000495677 PRO1933Q9H354 126 aa7□□□□□ -1.29
COL1A1-209ENST00000495677 E9PLD3 99 aa6.99□□□□□ -1.29
COL1A1-209ENST00000495677 NMUP48645 174 aa6.99□□□□□ -1.29
COL1A1-209ENST00000495677 NPC2P61916 151 aa6.99□□□□□ -1.29
COL1A1-209ENST00000495677 SNRPEP62304 92 aaKnown RBP6.99□□□□□ -1.29
COL1A1-209ENST00000495677 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
COL1A1-209ENST00000495677 MIEN1Q9BRT3 115 aa6.99□□□□□ -1.29
COL1A1-209ENST00000495677 H7C2G1 150 aa6.98□□□□□ -1.29
COL1A1-209ENST00000495677 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
COL1A1-209ENST00000495677 DHRS4-AS1Q9P1J3 65 aa6.98□□□□□ -1.29
COL1A1-209ENST00000495677 ZNF815PA8K554 130 aa6.97□□□□□ -1.29
COL1A1-209ENST00000495677 SMIM29Q86T20 159 aa6.97□□□□□ -1.29
COL1A1-209ENST00000495677 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
COL1A1-209ENST00000495677 AKR1D1P51857 326 aa6.96□□□□□ -1.3
COL1A1-209ENST00000495677 A0A0J9YXY3 114 aa6.95□□□□□ -1.3
COL1A1-209ENST00000495677 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
COL1A1-209ENST00000495677 Q6Q795 121 aa6.95□□□□□ -1.3
COL1A1-209ENST00000495677 TMA7Q9Y2S6 64 aaKnown RBP6.95□□□□□ -1.3
COL1A1-209ENST00000495677 SOSTDC1Q6X4U4 206 aa6.93□□□□□ -1.3
COL1A1-209ENST00000495677 TEX49A0A1B0GTD5 131 aa6.92□□□□□ -1.3
COL1A1-209ENST00000495677 SCGB1D1O95968 90 aa6.92□□□□□ -1.3
COL1A1-209ENST00000495677 TAL2Q16559 108 aa6.92□□□□□ -1.3
COL1A1-209ENST00000495677 SCGB1D4Q6XE38 83 aa6.92□□□□□ -1.3
COL1A1-209ENST00000495677 HSBP1L1C9JCN9 74 aa6.91□□□□□ -1.3
COL1A1-209ENST00000495677 EIF4EBP3O60516 100 aaPredicted RBP6.91□□□□□ -1.3
COL1A1-209ENST00000495677 Q1RN00 199 aa6.91□□□□□ -1.3
COL1A1-209ENST00000495677 ADAMTSL4-AS1Q5T5F5 129 aa6.91□□□□□ -1.3
COL1A1-209ENST00000495677 LCE2BO14633 110 aa6.9□□□□□ -1.3
COL1A1-209ENST00000495677 ELOF1P60002 83 aaKnown RBP6.9□□□□□ -1.3
COL1A1-209ENST00000495677 ATP11AUNQ6ZP68 121 aa6.9□□□□□ -1.3
COL1A1-209ENST00000495677 PCP2Q8IVA1 136 aa6.9□□□□□ -1.3
COL1A1-209ENST00000495677 Q75L30 129 aa6.89□□□□□ -1.31
COL1A1-209ENST00000495677 TCL1BO95988 128 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms