RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 TPRXLQ17RH7 258 aa4.34□□□□□ -1.71
RBM39-238ENST00000493853 SMCR5Q8TEV8 140 aa4.34□□□□□ -1.71
RBM39-238ENST00000493853 PPDPFQ9H3Y8 114 aa4.34□□□□□ -1.71
RBM39-238ENST00000493853 LEPROTL1O95214 131 aa4.33□□□□□ -1.72
RBM39-238ENST00000493853 LINC00337Q8N6G1 96 aa4.33□□□□□ -1.72
RBM39-238ENST00000493853 MIEN1Q9BRT3 115 aa4.33□□□□□ -1.72
RBM39-238ENST00000493853 KCNQ1DNQ9H478 68 aa4.33□□□□□ -1.72
RBM39-238ENST00000493853 TRBV10-3A0A0K0K1G6 114 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 LEPROTO15243 131 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 SCGB1D1O95968 90 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 HERVK_113P61574 105 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 GAGE2AQ6NT46 116 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 DAND5Q8N907 189 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 Q8NBF4 154 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
RBM39-238ENST00000493853 SPINK1P00995 79 aa4.31□□□□□ -1.72
RBM39-238ENST00000493853 TRGC2P03986 189 aa4.31□□□□□ -1.72
RBM39-238ENST00000493853 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
RBM39-238ENST00000493853 PLNP26678 52 aa4.31□□□□□ -1.72
RBM39-238ENST00000493853 DDTP30046 118 aa4.31□□□□□ -1.72
RBM39-238ENST00000493853 S100A7L2Q5SY68 101 aa4.31□□□□□ -1.72
RBM39-238ENST00000493853 FP248Q71RG6 208 aaPredicted RBP4.31□□□□□ -1.72
RBM39-238ENST00000493853 HSPB8Q9UJY1 196 aa4.31□□□□□ -1.72
RBM39-238ENST00000493853 IGLV9-49A0A0B4J1Y8 123 aa4.3□□□□□ -1.72
RBM39-238ENST00000493853 J3QQQ9 107 aa4.3□□□□□ -1.72
RBM39-238ENST00000493853 DPM2O94777 84 aa4.3□□□□□ -1.72
RBM39-238ENST00000493853 FABP4P15090 132 aa4.3□□□□□ -1.72
RBM39-238ENST00000493853 SPRR1AP35321 89 aa4.3□□□□□ -1.72
RBM39-238ENST00000493853 NMUP48645 174 aa4.3□□□□□ -1.72
RBM39-238ENST00000493853 YPEL4Q96NS1 127 aa4.3□□□□□ -1.72
RBM39-238ENST00000493853 TRBV10-2A0A0K0K1G8 114 aa4.29□□□□□ -1.72
RBM39-238ENST00000493853 SERF1AO75920 110 aa4.29□□□□□ -1.72
RBM39-238ENST00000493853 IGKCP01834 107 aa4.29□□□□□ -1.72
RBM39-238ENST00000493853 HINT1P49773 126 aaPredicted RBP4.29□□□□□ -1.72
RBM39-238ENST00000493853 JOSD1Q15040 202 aaPredicted RBP4.29□□□□□ -1.72
RBM39-238ENST00000493853 SPANXB1Q9NS25 103 aaPredicted RBP4.29□□□□□ -1.72
RBM39-238ENST00000493853 LOC107984156A0A0G2JMH3 177 aa4.28□□□□□ -1.72
RBM39-238ENST00000493853 KRTAP4-16G5E9R7 235 aaPredicted RBP4.28□□□□□ -1.72
RBM39-238ENST00000493853 TSPEAR-AS2P59090 65 aa4.28□□□□□ -1.72
RBM39-238ENST00000493853 MOBPQ13875 183 aa4.28□□□□□ -1.72
RBM39-238ENST00000493853 SSBP3-AS1Q7Z2R9 100 aa4.28□□□□□ -1.72
RBM39-238ENST00000493853 ARL17AQ8IVW1 177 aa4.28□□□□□ -1.72
RBM39-238ENST00000493853 PMCHL2Q9BQD1 86 aa4.28□□□□□ -1.72
RBM39-238ENST00000493853 CBY1Q9Y3M2 126 aa4.28□□□□□ -1.72
RBM39-238ENST00000493853 ERC2-IT1O76042 136 aa4.27□□□□□ -1.73
RBM39-238ENST00000493853 NDUFC2O95298 119 aa4.27□□□□□ -1.73
RBM39-238ENST00000493853 MT3P25713 68 aa4.27□□□□□ -1.73
RBM39-238ENST00000493853 NPC2P61916 151 aa4.27□□□□□ -1.73
RBM39-238ENST00000493853 LINC00483Q53H64 154 aa4.27□□□□□ -1.73
RBM39-238ENST00000493853 Q6ZRX8 168 aa4.27□□□□□ -1.73
RBM39-238ENST00000493853 MUC2Q02817 5179 aa4.26□□□□□ -1.73
RBM39-238ENST00000493853 TRAV23DV6A0A075B6W5 121 aa4.26□□□□□ -1.73
RBM39-238ENST00000493853 C9orf153Q5TBE3 101 aa4.26□□□□□ -1.73
RBM39-238ENST00000493853 SLC25A20O43772 301 aa4.25□□□□□ -1.73
RBM39-238ENST00000493853 ZNF73O43830 326 aaPredicted RBP4.25□□□□□ -1.73
RBM39-238ENST00000493853 IGLV6-57P01721 117 aa4.25□□□□□ -1.73
RBM39-238ENST00000493853 RPS29P62273 56 aaKnown RBP4.25□□□□□ -1.73
RBM39-238ENST00000493853 OR13C6PQ8NH95 151 aa4.25□□□□□ -1.73
RBM39-238ENST00000493853 Q9BRP9 147 aa4.25□□□□□ -1.73
RBM39-238ENST00000493853 A0A0J9YXY3 114 aa4.24□□□□□ -1.73
RBM39-238ENST00000493853 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
RBM39-238ENST00000493853 KRTAP13-3Q3SY46 172 aa4.24□□□□□ -1.73
RBM39-238ENST00000493853 E9PLD3 99 aa4.23□□□□□ -1.73
RBM39-238ENST00000493853 ASB16-AS1Q495Z4 193 aa4.23□□□□□ -1.73
RBM39-238ENST00000493853 ADAMTSL4-AS1Q5T5F5 129 aa4.23□□□□□ -1.73
RBM39-238ENST00000493853 SLC25A34Q6PIV7 304 aa4.23□□□□□ -1.73
RBM39-238ENST00000493853 Q8N377 158 aa4.23□□□□□ -1.73
RBM39-238ENST00000493853 C5orf52A6NGY3 159 aa4.22□□□□□ -1.73
RBM39-238ENST00000493853 COLCA2A8K830 154 aa4.22□□□□□ -1.73
RBM39-238ENST00000493853 LINC01547P58512 204 aaPredicted RBP4.22□□□□□ -1.73
RBM39-238ENST00000493853 SOSTDC1Q6X4U4 206 aa4.22□□□□□ -1.73
RBM39-238ENST00000493853 SLC7A5P1Q8MH63 180 aa4.22□□□□□ -1.73
RBM39-238ENST00000493853 SPANXCQ9NY87 97 aa4.22□□□□□ -1.73
RBM39-238ENST00000493853 SYS1-DBNDD2H3BUS1 97 aa4.21□□□□□ -1.74
RBM39-238ENST00000493853 LINC00518Q8N0U6 118 aa4.21□□□□□ -1.74
RBM39-238ENST00000493853 ST20-AS1Q8NBB2 130 aa4.21□□□□□ -1.74
RBM39-238ENST00000493853 LINC00308Q8TCZ7 52 aa4.21□□□□□ -1.74
RBM39-238ENST00000493853 DHRS4-AS1Q9P1J3 65 aa4.21□□□□□ -1.74
RBM39-238ENST00000493853 LAMTOR3Q9UHA4 124 aa4.21□□□□□ -1.74
RBM39-238ENST00000493853 ZNF815PA8K554 130 aa4.2□□□□□ -1.74
RBM39-238ENST00000493853 TAL2Q16559 108 aa4.2□□□□□ -1.74
RBM39-238ENST00000493853 PET117Q6UWS5 81 aa4.2□□□□□ -1.74
RBM39-238ENST00000493853 HRCT1Q6UXD1 115 aa4.2□□□□□ -1.74
RBM39-238ENST00000493853 LIMD2Q9BT23 127 aa4.2□□□□□ -1.74
RBM39-238ENST00000493853 TIMM17BO60830 172 aa4.19□□□□□ -1.74
RBM39-238ENST00000493853 COX7BP24311 80 aa4.19□□□□□ -1.74
RBM39-238ENST00000493853 SCGB1D4Q6XE38 83 aa4.19□□□□□ -1.74
RBM39-238ENST00000493853 DEFB105AQ8NG35 78 aa4.19□□□□□ -1.74
RBM39-238ENST00000493853 SPANXDQ9BXN6 97 aa4.19□□□□□ -1.74
RBM39-238ENST00000493853 HIST1H2BKO60814 126 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST1H2BJP06899 126 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST1H2BOP23527 126 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST1H2BBP33778 126 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST1H2BDP58876 126 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST1H2BCP62807 126 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST2H2BEQ16778 126 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.18□□□□□ -1.74
RBM39-238ENST00000493853 LINC01545Q5VT33 79 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 COPS9Q8WXC6 57 aa4.18□□□□□ -1.74
RBM39-238ENST00000493853 HIST1H2BHQ93079 126 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms