RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PMCHL2Q9BQD1 86 aa7.04□□□□□ -1.28
COL6A1-205ENST00000492851 LCE2AQ5TA79 106 aaPredicted RBP7.03□□□□□ -1.28
COL6A1-205ENST00000492851 MUC17Q685J3 4493 aa7.02□□□□□ -1.29
COL6A1-205ENST00000492851 SEC61BP60468 96 aaKnown RBP7.02□□□□□ -1.29
COL6A1-205ENST00000492851 ASB16-AS1Q495Z4 193 aa7.02□□□□□ -1.29
COL6A1-205ENST00000492851 SLC25A34Q6PIV7 304 aa7.02□□□□□ -1.29
COL6A1-205ENST00000492851 Q8N377 158 aa7.02□□□□□ -1.29
COL6A1-205ENST00000492851 ADAMTSL4-AS1Q5T5F5 129 aa7.01□□□□□ -1.29
COL6A1-205ENST00000492851 SPANXCQ9NY87 97 aa7.01□□□□□ -1.29
COL6A1-205ENST00000492851 SYS1-DBNDD2H3BUS1 97 aa7□□□□□ -1.29
COL6A1-205ENST00000492851 TIMM17BO60830 172 aa7□□□□□ -1.29
COL6A1-205ENST00000492851 C9orf153Q5TBE3 101 aa7□□□□□ -1.29
COL6A1-205ENST00000492851 NPC2P61916 151 aa6.99□□□□□ -1.29
COL6A1-205ENST00000492851 SOSTDC1Q6X4U4 206 aa6.99□□□□□ -1.29
COL6A1-205ENST00000492851 LINC00518Q8N0U6 118 aa6.99□□□□□ -1.29
COL6A1-205ENST00000492851 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
COL6A1-205ENST00000492851 DHRS4-AS1Q9P1J3 65 aa6.99□□□□□ -1.29
COL6A1-205ENST00000492851 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
COL6A1-205ENST00000492851 SLC7A5P1Q8MH63 180 aa6.98□□□□□ -1.29
COL6A1-205ENST00000492851 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
COL6A1-205ENST00000492851 SPANXDQ9BXN6 97 aa6.97□□□□□ -1.29
COL6A1-205ENST00000492851 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
COL6A1-205ENST00000492851 SPRR1BP22528 89 aa6.96□□□□□ -1.3
COL6A1-205ENST00000492851 LINC01545Q5VT33 79 aa6.96□□□□□ -1.3
COL6A1-205ENST00000492851 COPS9Q8WXC6 57 aa6.96□□□□□ -1.3
COL6A1-205ENST00000492851 LIMD2Q9BT23 127 aa6.96□□□□□ -1.3
COL6A1-205ENST00000492851 LAMTOR3Q9UHA4 124 aa6.96□□□□□ -1.3
COL6A1-205ENST00000492851 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
COL6A1-205ENST00000492851 EIF4EBP3O60516 100 aaPredicted RBP6.95□□□□□ -1.3
COL6A1-205ENST00000492851 LINC01547P58512 204 aaPredicted RBP6.95□□□□□ -1.3
COL6A1-205ENST00000492851 ST20-AS1Q8NBB2 130 aa6.95□□□□□ -1.3
COL6A1-205ENST00000492851 LITAFQ99732 161 aa6.95□□□□□ -1.3
COL6A1-205ENST00000492851 FAT4Q6V0I7 4981 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BKO60814 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BJP06899 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BOP23527 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BBP33778 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BDP58876 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BCP62807 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST2H2BEQ16778 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BHQ93079 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BNQ99877 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 HIST1H2BMQ99879 126 aa6.94□□□□□ -1.3
COL6A1-205ENST00000492851 XP32Q5T750 250 aa6.93□□□□□ -1.3
COL6A1-205ENST00000492851 TRBV7-6A0A0J9YX20 115 aa6.92□□□□□ -1.3
COL6A1-205ENST00000492851 COX7BP24311 80 aa6.92□□□□□ -1.3
COL6A1-205ENST00000492851 AKR1D1P51857 326 aa6.92□□□□□ -1.3
COL6A1-205ENST00000492851 ELOF1P60002 83 aaKnown RBP6.91□□□□□ -1.3
COL6A1-205ENST00000492851 TAL2Q16559 108 aa6.91□□□□□ -1.3
COL6A1-205ENST00000492851 C20orf202A1L168 122 aa6.9□□□□□ -1.3
COL6A1-205ENST00000492851 IFITM1P13164 125 aa6.9□□□□□ -1.3
COL6A1-205ENST00000492851 CD164Q04900 197 aa6.9□□□□□ -1.3
COL6A1-205ENST00000492851 C6orf99Q4VX62 202 aa6.9□□□□□ -1.3
COL6A1-205ENST00000492851 SCGB1D4Q6XE38 83 aa6.9□□□□□ -1.3
COL6A1-205ENST00000492851 Q6ZVH6 145 aa6.9□□□□□ -1.3
COL6A1-205ENST00000492851 TEX49A0A1B0GTD5 131 aa6.89□□□□□ -1.31
COL6A1-205ENST00000492851 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
COL6A1-205ENST00000492851 PRO1933Q9H354 126 aa6.89□□□□□ -1.31
COL6A1-205ENST00000492851 COA6Q5JTJ3 125 aaKnown RBP6.88□□□□□ -1.31
COL6A1-205ENST00000492851 A0A1B0GWB2 263 aa6.87□□□□□ -1.31
COL6A1-205ENST00000492851 A4D1N5 150 aa6.87□□□□□ -1.31
COL6A1-205ENST00000492851 KRTDAPP60985 99 aa6.87□□□□□ -1.31
COL6A1-205ENST00000492851 A6NDN8 102 aa6.86□□□□□ -1.31
COL6A1-205ENST00000492851 HRCT1Q6UXD1 115 aa6.86□□□□□ -1.31
COL6A1-205ENST00000492851 DEFB105AQ8NG35 78 aa6.86□□□□□ -1.31
COL6A1-205ENST00000492851 H7C2G1 150 aa6.85□□□□□ -1.31
COL6A1-205ENST00000492851 TTTY13Q9BZ97 58 aa6.85□□□□□ -1.31
COL6A1-205ENST00000492851 NHP2Q9NX24 153 aaKnown RBP6.85□□□□□ -1.31
COL6A1-205ENST00000492851 SNRPEP62304 92 aaKnown RBP6.84□□□□□ -1.31
COL6A1-205ENST00000492851 Q1RN00 199 aa6.84□□□□□ -1.31
COL6A1-205ENST00000492851 Q5XG85 94 aa6.84□□□□□ -1.31
COL6A1-205ENST00000492851 TRAV13-2A0A0B4J235 113 aa6.83□□□□□ -1.32
COL6A1-205ENST00000492851 KRTAP4-1Q9BYQ7 146 aa6.83□□□□□ -1.32
COL6A1-205ENST00000492851 IGLV5-48A0A075B6I7 105 aa6.82□□□□□ -1.32
COL6A1-205ENST00000492851 MUSTN1Q8IVN3 82 aa6.82□□□□□ -1.32
COL6A1-205ENST00000492851 VAMP3Q15836 100 aa6.81□□□□□ -1.32
COL6A1-205ENST00000492851 ANKRD39Q53RE8 183 aa6.8□□□□□ -1.32
COL6A1-205ENST00000492851 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
COL6A1-205ENST00000492851 IGLV8-61A0A075B6I0 122 aa6.78□□□□□ -1.32
COL6A1-205ENST00000492851 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
COL6A1-205ENST00000492851 C9orf92A6NGG3 77 aa6.78□□□□□ -1.32
COL6A1-205ENST00000492851 TCL1BO95988 128 aa6.78□□□□□ -1.32
COL6A1-205ENST00000492851 PCOTHQ58A44 107 aa6.78□□□□□ -1.32
COL6A1-205ENST00000492851 PCP2Q8IVA1 136 aa6.77□□□□□ -1.33
COL6A1-205ENST00000492851 ATOH7Q8N100 152 aa6.77□□□□□ -1.33
COL6A1-205ENST00000492851 F8WEM9 126 aa6.76□□□□□ -1.33
COL6A1-205ENST00000492851 C1orf195Q5TG92 126 aa6.76□□□□□ -1.33
COL6A1-205ENST00000492851 SMIM11BQ8TCY0 68 aa6.76□□□□□ -1.33
COL6A1-205ENST00000492851 HSBP1L1C9JCN9 74 aa6.75□□□□□ -1.33
COL6A1-205ENST00000492851 LCE2DQ5TA82 110 aaPredicted RBP6.74□□□□□ -1.33
COL6A1-205ENST00000492851 CFC1BP0CG36 223 aa6.72□□□□□ -1.33
COL6A1-205ENST00000492851 S100A2P29034 98 aa6.72□□□□□ -1.33
COL6A1-205ENST00000492851 Q6JHZ5 121 aa6.72□□□□□ -1.33
COL6A1-205ENST00000492851 LINC00575Q6W349 94 aa6.72□□□□□ -1.33
COL6A1-205ENST00000492851 hADV29S1A0JD25 119 aa6.71□□□□□ -1.34
COL6A1-205ENST00000492851 LCE2CQ5TA81 110 aa6.71□□□□□ -1.34
COL6A1-205ENST00000492851 RPL37P61927 97 aaKnown RBP6.7□□□□□ -1.34
COL6A1-205ENST00000492851 PPDPFLQ8WWR9 84 aa6.69□□□□□ -1.34
COL6A1-205ENST00000492851 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms