RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 Q8N377 158 aa7.6□□□□□ -1.19
GPNMB-213ENST00000492512 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
GPNMB-213ENST00000492512 IGLV5-39A0A0G2JS06 123 aa7.59□□□□□ -1.19
GPNMB-213ENST00000492512 KRTAP19-2Q3LHN2 52 aa7.59□□□□□ -1.19
GPNMB-213ENST00000492512 ATOH7Q8N100 152 aa7.59□□□□□ -1.19
GPNMB-213ENST00000492512 C14orf144Q96I85 54 aa7.59□□□□□ -1.19
GPNMB-213ENST00000492512 H0Y8G0 127 aa7.58□□□□□ -1.2
GPNMB-213ENST00000492512 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
GPNMB-213ENST00000492512 TRAV12-1A0A0B4J245 112 aa7.57□□□□□ -1.2
GPNMB-213ENST00000492512 SLC25A20O43772 301 aa7.57□□□□□ -1.2
GPNMB-213ENST00000492512 SMCR5Q8TEV8 140 aa7.57□□□□□ -1.2
GPNMB-213ENST00000492512 PMCHL2Q9BQD1 86 aa7.57□□□□□ -1.2
GPNMB-213ENST00000492512 M0R143 59 aa7.56□□□□□ -1.2
GPNMB-213ENST00000492512 PRYO14603 147 aa7.56□□□□□ -1.2
GPNMB-213ENST00000492512 MOBPQ13875 183 aa7.56□□□□□ -1.2
GPNMB-213ENST00000492512 IGLV9-49A0A0B4J1Y8 123 aa7.55□□□□□ -1.2
GPNMB-213ENST00000492512 DPM2O94777 84 aa7.55□□□□□ -1.2
GPNMB-213ENST00000492512 LINC00483Q53H64 154 aa7.55□□□□□ -1.2
GPNMB-213ENST00000492512 GAGE2AQ6NT46 116 aa7.55□□□□□ -1.2
GPNMB-213ENST00000492512 ETDCA0A1B0GVM5 59 aa7.54□□□□□ -1.2
GPNMB-213ENST00000492512 LORP23490 312 aaPredicted RBP7.54□□□□□ -1.2
GPNMB-213ENST00000492512 LINC00158P58513 81 aa7.54□□□□□ -1.2
GPNMB-213ENST00000492512 SLC25A34Q6PIV7 304 aa7.54□□□□□ -1.2
GPNMB-213ENST00000492512 SFTA2Q6UW10 78 aa7.54□□□□□ -1.2
GPNMB-213ENST00000492512 SSBP3-AS1Q7Z2R9 100 aa7.54□□□□□ -1.2
GPNMB-213ENST00000492512 IGKCP01834 107 aa7.53□□□□□ -1.2
GPNMB-213ENST00000492512 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-213ENST00000492512 PLNP26678 52 aa7.53□□□□□ -1.2
GPNMB-213ENST00000492512 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
GPNMB-213ENST00000492512 IGLV8-61A0A075B6I0 122 aa7.52□□□□□ -1.21
GPNMB-213ENST00000492512 COX8AP10176 69 aa7.52□□□□□ -1.21
GPNMB-213ENST00000492512 SPRR1AP35321 89 aa7.52□□□□□ -1.21
GPNMB-213ENST00000492512 DLEU1O43261 78 aa7.51□□□□□ -1.21
GPNMB-213ENST00000492512 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
GPNMB-213ENST00000492512 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
GPNMB-213ENST00000492512 CHTOPQ9Y3Y2 248 aaKnown RBP7.51□□□□□ -1.21
GPNMB-213ENST00000492512 A0A0U1RRA0 63 aa7.5□□□□□ -1.21
GPNMB-213ENST00000492512 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
GPNMB-213ENST00000492512 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
GPNMB-213ENST00000492512 M0R2T5 61 aa7.49□□□□□ -1.21
GPNMB-213ENST00000492512 NCR3O14931 201 aa7.49□□□□□ -1.21
GPNMB-213ENST00000492512 ANKRD39Q53RE8 183 aa7.49□□□□□ -1.21
GPNMB-213ENST00000492512 BOD1L2Q8IYS8 172 aa7.49□□□□□ -1.21
GPNMB-213ENST00000492512 TMEM170BQ5T4T1 132 aa7.47□□□□□ -1.21
GPNMB-213ENST00000492512 TRBV10-3A0A0K0K1G6 114 aa7.46□□□□□ -1.22
GPNMB-213ENST00000492512 C11orf86A6NJI1 115 aa7.46□□□□□ -1.22
GPNMB-213ENST00000492512 ERC2-IT1O76042 136 aa7.46□□□□□ -1.22
GPNMB-213ENST00000492512 COL5A1-AS1Q5SY13 56 aa7.46□□□□□ -1.22
GPNMB-213ENST00000492512 B5MCH6 92 aa7.45□□□□□ -1.22
GPNMB-213ENST00000492512 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
GPNMB-213ENST00000492512 NMUP48645 174 aa7.45□□□□□ -1.22
GPNMB-213ENST00000492512 HERVK_113P61574 105 aa7.45□□□□□ -1.22
GPNMB-213ENST00000492512 C9orf153Q5TBE3 101 aa7.45□□□□□ -1.22
GPNMB-213ENST00000492512 C9orf92A6NGG3 77 aa7.44□□□□□ -1.22
GPNMB-213ENST00000492512 KRTAP9-7A8MTY7 169 aa7.44□□□□□ -1.22
GPNMB-213ENST00000492512 HIGD1BQ9P298 99 aa7.44□□□□□ -1.22
GPNMB-213ENST00000492512 BATFQ16520 125 aa7.43□□□□□ -1.22
GPNMB-213ENST00000492512 MEIG1Q5JSS6 88 aa7.43□□□□□ -1.22
GPNMB-213ENST00000492512 E9PLD3 99 aa7.42□□□□□ -1.22
GPNMB-213ENST00000492512 HSD52Q0P140 79 aa7.42□□□□□ -1.22
GPNMB-213ENST00000492512 C2orf91Q6ZV80 131 aa7.42□□□□□ -1.22
GPNMB-213ENST00000492512 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
GPNMB-213ENST00000492512 Q9BRP9 147 aa7.42□□□□□ -1.22
GPNMB-213ENST00000492512 HINT1P49773 126 aaPredicted RBP7.41□□□□□ -1.22
GPNMB-213ENST00000492512 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
GPNMB-213ENST00000492512 PCP2Q8IVA1 136 aa7.41□□□□□ -1.22
GPNMB-213ENST00000492512 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.22
GPNMB-213ENST00000492512 Q6ZRX8 168 aa7.4□□□□□ -1.22
GPNMB-213ENST00000492512 A0A1B0GV90 55 aa7.39□□□□□ -1.23
GPNMB-213ENST00000492512 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
GPNMB-213ENST00000492512 TAL2Q16559 108 aa7.39□□□□□ -1.23
GPNMB-213ENST00000492512 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
GPNMB-213ENST00000492512 FLGP20930 4061 aaPredicted RBP7.37□□□□□ -1.23
GPNMB-213ENST00000492512 MYMXA0A1B0GTQ4 84 aa7.37□□□□□ -1.23
GPNMB-213ENST00000492512 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
GPNMB-213ENST00000492512 A6NDN8 102 aa7.37□□□□□ -1.23
GPNMB-213ENST00000492512 HERV-K104P63124 156 aa7.37□□□□□ -1.23
GPNMB-213ENST00000492512 IGLV6-57P01721 117 aa7.36□□□□□ -1.23
GPNMB-213ENST00000492512 ZNF815PA8K554 130 aa7.35□□□□□ -1.23
GPNMB-213ENST00000492512 LEPROTO15243 131 aa7.35□□□□□ -1.23
GPNMB-213ENST00000492512 HRCT1Q6UXD1 115 aa7.35□□□□□ -1.23
GPNMB-213ENST00000492512 TRBV10-2A0A0K0K1G8 114 aa7.34□□□□□ -1.23
GPNMB-213ENST00000492512 J3QQQ9 107 aa7.34□□□□□ -1.23
GPNMB-213ENST00000492512 LGALS3P17931 250 aaKnown RBP7.34□□□□□ -1.23
GPNMB-213ENST00000492512 ST20-AS1Q8NBB2 130 aa7.33□□□□□ -1.24
GPNMB-213ENST00000492512 TTTY13Q9BZ97 58 aa7.33□□□□□ -1.24
GPNMB-213ENST00000492512 S100A7L2Q5SY68 101 aa7.32□□□□□ -1.24
GPNMB-213ENST00000492512 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
GPNMB-213ENST00000492512 CEND1Q8N111 149 aa7.31□□□□□ -1.24
GPNMB-213ENST00000492512 HIST1H4GQ99525 98 aa7.31□□□□□ -1.24
GPNMB-213ENST00000492512 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
GPNMB-213ENST00000492512 TRAV23DV6A0A075B6W5 121 aa7.3□□□□□ -1.24
GPNMB-213ENST00000492512 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
GPNMB-213ENST00000492512 TAX1BP3O14907 124 aa7.3□□□□□ -1.24
GPNMB-213ENST00000492512 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
GPNMB-213ENST00000492512 TMEM238LA0A1B0GVL6 79 aa7.29□□□□□ -1.24
GPNMB-213ENST00000492512 A6NJY4 79 aa7.29□□□□□ -1.24
GPNMB-213ENST00000492512 TSPEAR-AS2P59090 65 aa7.29□□□□□ -1.24
GPNMB-213ENST00000492512 ZNF73O43830 326 aaPredicted RBP7.28□□□□□ -1.24
GPNMB-213ENST00000492512 RPL37P61927 97 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms