RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 A6NDN8 102 aa4.89□□□□□ -1.63
APOBEC3F-204ENST00000491387 TMEM238C9JI98 176 aa4.89□□□□□ -1.63
APOBEC3F-204ENST00000491387 VPREB1P12018 145 aa4.89□□□□□ -1.63
APOBEC3F-204ENST00000491387 PRLHP81277 87 aa4.89□□□□□ -1.63
APOBEC3F-204ENST00000491387 CEND1Q8N111 149 aa4.89□□□□□ -1.63
APOBEC3F-204ENST00000491387 LINC00304Q8N9R0 145 aa4.89□□□□□ -1.63
APOBEC3F-204ENST00000491387 HIST1H4GQ99525 98 aa4.89□□□□□ -1.63
APOBEC3F-204ENST00000491387 A0A0U1RRA0 63 aa4.88□□□□□ -1.63
APOBEC3F-204ENST00000491387 SND1-IT1Q9HBX3 110 aa4.88□□□□□ -1.63
APOBEC3F-204ENST00000491387 SPANXB1Q9NS25 103 aaPredicted RBP4.88□□□□□ -1.63
APOBEC3F-204ENST00000491387 IGLV7-46A0A075B6I9 117 aa4.87□□□□□ -1.63
APOBEC3F-204ENST00000491387 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
APOBEC3F-204ENST00000491387 FXYD2P54710 66 aa4.87□□□□□ -1.63
APOBEC3F-204ENST00000491387 CDIP1Q9H305 208 aa4.87□□□□□ -1.63
APOBEC3F-204ENST00000491387 NDUFA12Q9UI09 145 aa4.87□□□□□ -1.63
APOBEC3F-204ENST00000491387 ERG28Q9UKR5 140 aa4.87□□□□□ -1.63
APOBEC3F-204ENST00000491387 A0A0J9YXY3 114 aa4.86□□□□□ -1.63
APOBEC3F-204ENST00000491387 UBE2AP49459 152 aa4.86□□□□□ -1.63
APOBEC3F-204ENST00000491387 NKAPP1Q8N9T2 125 aa4.86□□□□□ -1.63
APOBEC3F-204ENST00000491387 RETNLBQ9BQ08 111 aa4.86□□□□□ -1.63
APOBEC3F-204ENST00000491387 TMEM238LA0A1B0GVL6 79 aa4.85□□□□□ -1.63
APOBEC3F-204ENST00000491387 A6NJY4 79 aa4.85□□□□□ -1.63
APOBEC3F-204ENST00000491387 M0R378 163 aa4.85□□□□□ -1.63
APOBEC3F-204ENST00000491387 SMIM13P0DJ93 91 aa4.85□□□□□ -1.63
APOBEC3F-204ENST00000491387 TMEM126AQ9H061 195 aa4.85□□□□□ -1.63
APOBEC3F-204ENST00000491387 NHP2Q9NX24 153 aaKnown RBP4.85□□□□□ -1.63
APOBEC3F-204ENST00000491387 TIMM17BO60830 172 aa4.84□□□□□ -1.63
APOBEC3F-204ENST00000491387 Q6ZVH6 145 aa4.84□□□□□ -1.63
APOBEC3F-204ENST00000491387 FAM19A1Q7Z5A9 133 aa4.84□□□□□ -1.63
APOBEC3F-204ENST00000491387 A0A1B0GWB2 263 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 C9orf118A6NHY6 69 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 NCR3O14931 201 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 HERV-K104P63124 156 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 SPAG11AQ6PDA7 123 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 FP248Q71RG6 208 aaPredicted RBP4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 C3orf22Q8N5N4 141 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 LITAFQ99732 161 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 SPANXDQ9BXN6 97 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 PPDPFQ9H3Y8 114 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 SPANXCQ9NY87 97 aa4.83□□□□□ -1.64
APOBEC3F-204ENST00000491387 K7ERJ3 54 aa4.82□□□□□ -1.64
APOBEC3F-204ENST00000491387 LINC00158P58513 81 aa4.82□□□□□ -1.64
APOBEC3F-204ENST00000491387 RPL24P83731 157 aaKnown RBP4.82□□□□□ -1.64
APOBEC3F-204ENST00000491387 DAND5Q8N907 189 aa4.82□□□□□ -1.64
APOBEC3F-204ENST00000491387 RAB37Q96AX2 223 aa4.82□□□□□ -1.64
APOBEC3F-204ENST00000491387 H3BUT2 72 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 IFITM1P13164 125 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 COX17Q14061 63 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 ASB16-AS1Q495Z4 193 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 MEIG1Q5JSS6 88 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 ADAMTSL4-AS1Q5T5F5 129 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 LCE2DQ5TA82 110 aaPredicted RBP4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 SFTA2Q6UW10 78 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 MUSTN1Q8IVN3 82 aa4.81□□□□□ -1.64
APOBEC3F-204ENST00000491387 A4D1N5 150 aa4.8□□□□□ -1.64
APOBEC3F-204ENST00000491387 VAMP3Q15836 100 aa4.8□□□□□ -1.64
APOBEC3F-204ENST00000491387 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
APOBEC3F-204ENST00000491387 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
APOBEC3F-204ENST00000491387 COPS9Q8WXC6 57 aa4.8□□□□□ -1.64
APOBEC3F-204ENST00000491387 A0A0B4J2C4 111 aa4.79□□□□□ -1.64
APOBEC3F-204ENST00000491387 A0A1W2PPM0 123 aa4.79□□□□□ -1.64
APOBEC3F-204ENST00000491387 EIF4EBP3O60516 100 aaPredicted RBP4.79□□□□□ -1.64
APOBEC3F-204ENST00000491387 CFC1BP0CG36 223 aa4.79□□□□□ -1.64
APOBEC3F-204ENST00000491387 CFC1P0CG37 223 aa4.79□□□□□ -1.64
APOBEC3F-204ENST00000491387 NAA38Q9BRA0 125 aaKnown RBP4.79□□□□□ -1.64
APOBEC3F-204ENST00000491387 HIGD2AQ9BW72 106 aa4.79□□□□□ -1.64
APOBEC3F-204ENST00000491387 FABP2P12104 132 aa4.78□□□□□ -1.64
APOBEC3F-204ENST00000491387 NPC2P61916 151 aa4.78□□□□□ -1.64
APOBEC3F-204ENST00000491387 UBE2V1Q13404 147 aa4.78□□□□□ -1.64
APOBEC3F-204ENST00000491387 LINC00308Q8TCZ7 52 aa4.78□□□□□ -1.64
APOBEC3F-204ENST00000491387 SPRR4Q96PI1 79 aa4.78□□□□□ -1.64
APOBEC3F-204ENST00000491387 K7EP34 96 aa4.77□□□□□ -1.65
APOBEC3F-204ENST00000491387 GTF2H5Q6ZYL4 71 aa4.77□□□□□ -1.65
APOBEC3F-204ENST00000491387 PRO1854Q9UHT4 67 aa4.77□□□□□ -1.65
APOBEC3F-204ENST00000491387 TRBV10-3A0A0K0K1G6 114 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 ERC2-IT1O76042 136 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 LINC01547P58512 204 aaPredicted RBP4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 SOSTDC1Q6X4U4 206 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 LINC00337Q8N6G1 96 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 SMCR5Q8TEV8 140 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 KRTAP4-1Q9BYQ7 146 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 ZNF706Q9Y5V0 76 aaPredicted RBP4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 SPCS1Q9Y6A9 102 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
APOBEC3F-204ENST00000491387 SPINK1P00995 79 aa4.75□□□□□ -1.65
APOBEC3F-204ENST00000491387 SPRR1AP35321 89 aa4.75□□□□□ -1.65
APOBEC3F-204ENST00000491387 SEC61BP60468 96 aaKnown RBP4.75□□□□□ -1.65
APOBEC3F-204ENST00000491387 RPS29P62273 56 aaKnown RBP4.75□□□□□ -1.65
APOBEC3F-204ENST00000491387 C4orf48Q5BLP8 95 aa4.75□□□□□ -1.65
APOBEC3F-204ENST00000491387 LYRM7Q5U5X0 104 aa4.75□□□□□ -1.65
APOBEC3F-204ENST00000491387 PRYO14603 147 aa4.74□□□□□ -1.65
APOBEC3F-204ENST00000491387 Q1RN00 199 aa4.74□□□□□ -1.65
APOBEC3F-204ENST00000491387 Q8NBF4 154 aa4.74□□□□□ -1.65
APOBEC3F-204ENST00000491387 LOC107984156A0A0G2JMH3 177 aa4.73□□□□□ -1.65
APOBEC3F-204ENST00000491387 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
APOBEC3F-204ENST00000491387 ARL17AQ8IVW1 177 aa4.73□□□□□ -1.65
APOBEC3F-204ENST00000491387 Q9BRP9 147 aa4.73□□□□□ -1.65
APOBEC3F-204ENST00000491387 KCNQ1DNQ9H478 68 aa4.73□□□□□ -1.65
APOBEC3F-204ENST00000491387 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms