RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CRYGAP11844 174 aa14.94□□□□□ -0.02
USF3-203ENST00000491165 Q6ZR54 194 aa14.94□□□□□ -0.02
USF3-203ENST00000491165 KRTAP26-1Q6PEX3 210 aa14.93□□□□□ -0.02
USF3-203ENST00000491165 C6orf48Q9UBA6 75 aa14.93□□□□□ -0.02
USF3-203ENST00000491165 USP17L23D6RBM5 183 aa14.92□□□□□ -0.02
USF3-203ENST00000491165 RBM3P98179 157 aaKnown RBP14.92□□□□□ -0.02
USF3-203ENST00000491165 SVIPQ8NHG7 77 aa14.92□□□□□ -0.02
USF3-203ENST00000491165 UBL5Q9BZL1 73 aa14.91□□□□□ -0.02
USF3-203ENST00000491165 RYR2Q92736 4967 aa14.91□□□□□ -0.02
USF3-203ENST00000491165 IGKV2D-24A0A075B6R9 120 aa14.9□□□□□ -0.02
USF3-203ENST00000491165 LAMTOR3Q9UHA4 124 aa14.9□□□□□ -0.02
USF3-203ENST00000491165 Q6ZQT0 140 aa14.9□□□□□ -0.02
USF3-203ENST00000491165 SERP2Q8N6R1 65 aa14.9□□□□□ -0.02
USF3-203ENST00000491165 LOC110117498A0A087WWA1 95 aa14.89□□□□□ -0.03
USF3-203ENST00000491165 TRBV10-3A0A0K0K1G6 114 aa14.89□□□□□ -0.03
USF3-203ENST00000491165 LCE6AA0A183 80 aa14.89□□□□□ -0.03
USF3-203ENST00000491165 TRAV23DV6A0A075B6W5 121 aa14.89□□□□□ -0.03
USF3-203ENST00000491165 XAGE1AQ9HD64 81 aa14.89□□□□□ -0.03
USF3-203ENST00000491165 C1orf43Q9BWL3 253 aa14.88□□□□□ -0.03
USF3-203ENST00000491165 H3BQ85 93 aa14.87□□□□□ -0.03
USF3-203ENST00000491165 Q6ZQY7 126 aa14.87□□□□□ -0.03
USF3-203ENST00000491165 DIRC1Q969H9 104 aa14.87□□□□□ -0.03
USF3-203ENST00000491165 DNAH17Q9UFH2 4485 aa14.87□□□□□ -0.03
USF3-203ENST00000491165 Q6ZRN7 208 aaPredicted RBP14.86□□□□□ -0.03
USF3-203ENST00000491165 RYR3Q15413 4870 aa14.84□□□□□ -0.03
USF3-203ENST00000491165 FAT2Q9NYQ8 4349 aa14.84□□□□□ -0.03
USF3-203ENST00000491165 CAMK2N2Q96S95 79 aa14.83□□□□□ -0.04
USF3-203ENST00000491165 ZNF73O43830 326 aaPredicted RBP14.83□□□□□ -0.04
USF3-203ENST00000491165 HIGD2BQ4VC39 106 aa14.83□□□□□ -0.04
USF3-203ENST00000491165 DSCR8Q96T75 97 aa14.83□□□□□ -0.04
USF3-203ENST00000491165 FAM19A1Q7Z5A9 133 aa14.81□□□□□ -0.04
USF3-203ENST00000491165 PDE6GP18545 87 aa14.8□□□□□ -0.04
USF3-203ENST00000491165 COX7BP24311 80 aa14.8□□□□□ -0.04
USF3-203ENST00000491165 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.79□□□□□ -0.04
USF3-203ENST00000491165 VPREB1P12018 145 aa14.78□□□□□ -0.04
USF3-203ENST00000491165 ELOF1P60002 83 aaKnown RBP14.78□□□□□ -0.04
USF3-203ENST00000491165 TRBV7-6A0A0J9YX20 115 aa14.78□□□□□ -0.04
USF3-203ENST00000491165 CYSTM1Q9H1C7 97 aa14.78□□□□□ -0.04
USF3-203ENST00000491165 RMI2Q96E14 147 aa14.77□□□□□ -0.04
USF3-203ENST00000491165 GHRHP01286 108 aa14.77□□□□□ -0.05
USF3-203ENST00000491165 C1orf134Q5TEV5 83 aa14.76□□□□□ -0.05
USF3-203ENST00000491165 Q6ZRU5 148 aa14.75□□□□□ -0.05
USF3-203ENST00000491165 C15orf56Q8N910 161 aa14.75□□□□□ -0.05
USF3-203ENST00000491165 M0R378 163 aa14.75□□□□□ -0.05
USF3-203ENST00000491165 PSCAO43653 123 aa14.74□□□□□ -0.05
USF3-203ENST00000491165 NDUFC2-KCTD14E9PQ53 114 aa14.73□□□□□ -0.05
USF3-203ENST00000491165 Q6ZVQ6 151 aa14.73□□□□□ -0.05
USF3-203ENST00000491165 RTL8CO15255 209 aa14.72□□□□□ -0.05
USF3-203ENST00000491165 HECTD4Q9Y4D8 3996 aa14.72□□□□□ -0.05
USF3-203ENST00000491165 DNAH11Q96DT5 4516 aa14.72□□□□□ -0.05
USF3-203ENST00000491165 LINC01547P58512 204 aaPredicted RBP14.72□□□□□ -0.05
USF3-203ENST00000491165 TMEM258P61165 79 aa14.71□□□□□ -0.05
USF3-203ENST00000491165 LRCOL1A6NCL2 159 aa14.71□□□□□ -0.06
USF3-203ENST00000491165 TRBV7-4A0A0J9YYF1 115 aa14.7□□□□□ -0.06
USF3-203ENST00000491165 J3KT08 172 aa14.69□□□□□ -0.06
USF3-203ENST00000491165 HAMPP81172 84 aa14.69□□□□□ -0.06
USF3-203ENST00000491165 PKD1P98161 4303 aa14.69□□□□□ -0.06
USF3-203ENST00000491165 LINC00528Q8N1L1 170 aa14.66□□□□□ -0.06
USF3-203ENST00000491165 CXCL6P80162 114 aa14.66□□□□□ -0.06
USF3-203ENST00000491165 F8WDY8 70 aa14.65□□□□□ -0.06
USF3-203ENST00000491165 TNP2Q05952 138 aa14.65□□□□□ -0.06
USF3-203ENST00000491165 Q6ZRP5 223 aa14.65□□□□□ -0.06
USF3-203ENST00000491165 LOC107984640A0A0U1RRK4 108 aa14.63□□□□□ -0.07
USF3-203ENST00000491165 BCE1O60756 84 aa14.63□□□□□ -0.07
USF3-203ENST00000491165 RPS28P62857 69 aaKnown RBP14.63□□□□□ -0.07
USF3-203ENST00000491165 A0A087WTM6 91 aa14.62□□□□□ -0.07
USF3-203ENST00000491165 SYCNQ0VAF6 134 aa14.61□□□□□ -0.07
USF3-203ENST00000491165 DNAH5Q8TE73 4624 aa14.61□□□□□ -0.07
USF3-203ENST00000491165 FUSP35637 526 aaKnown RBP eCLIP14.6□□□□□ -0.07
USF3-203ENST00000491165 PKHD1P08F94 4074 aa14.6□□□□□ -0.07
USF3-203ENST00000491165 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.59□□□□□ -0.07
USF3-203ENST00000491165 TRAV7A0A075B6U4 112 aa14.57□□□□□ -0.08
USF3-203ENST00000491165 DPH3Q96FX2 82 aa14.57□□□□□ -0.08
USF3-203ENST00000491165 C20orf197Q8N268 126 aa14.56□□□□□ -0.08
USF3-203ENST00000491165 NKAPP1Q8N9T2 125 aa14.56□□□□□ -0.08
USF3-203ENST00000491165 KCNQ1DNQ9H478 68 aa14.54□□□□□ -0.08
USF3-203ENST00000491165 SCXQ7RTU7 201 aa14.52□□□□□ -0.09
USF3-203ENST00000491165 SERTAD4-AS1Q5TG53 156 aa14.51□□□□□ -0.09
USF3-203ENST00000491165 FAM19A5Q7Z5A7 132 aaPredicted RBP14.51□□□□□ -0.09
USF3-203ENST00000491165 C7orf33Q8WU49 177 aa14.5□□□□□ -0.09
USF3-203ENST00000491165 C14orf177Q52M58 125 aa14.5□□□□□ -0.09
USF3-203ENST00000491165 KRTAP10-2P60368 255 aa14.49□□□□□ -0.09
USF3-203ENST00000491165 CNBPP62633 177 aaKnown RBP14.48□□□□□ -0.09
USF3-203ENST00000491165 TLX1NBP0CAT3 122 aa14.48□□□□□ -0.09
USF3-203ENST00000491165 PLA2G2DQ9UNK4 145 aa14.45□□□□□ -0.1
USF3-203ENST00000491165 DEFB105AQ8NG35 78 aa14.44□□□□□ -0.1
USF3-203ENST00000491165 KLKP1Q107X0 134 aa14.43□□□□□ -0.1
USF3-203ENST00000491165 Q8N377 158 aa14.43□□□□□ -0.1
USF3-203ENST00000491165 LINC00336Q6ZUF6 198 aa14.42□□□□□ -0.1
USF3-203ENST00000491165 DHRS4-AS1Q9P1J3 65 aa14.42□□□□□ -0.1
USF3-203ENST00000491165 NREPQ16612 68 aa14.41□□□□□ -0.1
USF3-203ENST00000491165 H7BZZ5 65 aa14.41□□□□□ -0.1
USF3-203ENST00000491165 OXTP01178 125 aa14.41□□□□□ -0.1
USF3-203ENST00000491165 C9orf163Q8N9P6 203 aa14.41□□□□□ -0.1
USF3-203ENST00000491165 A0A1B0GVY2 172 aa14.4□□□□□ -0.1
USF3-203ENST00000491165 Q6ZRX8 168 aa14.4□□□□□ -0.1
USF3-203ENST00000491165 FAM236DA0A1B0GTK5 79 aa14.39□□□□□ -0.11
USF3-203ENST00000491165 PRYO14603 147 aa14.39□□□□□ -0.11
USF3-203ENST00000491165 FAM236CP0DP71 79 aa14.39□□□□□ -0.11
USF3-203ENST00000491165 IGLV5-48A0A075B6I7 105 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms