RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 IGKCP01834 107 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 NMUP48645 174 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
SCAMP3-208ENST00000490999 BOD1L2Q8IYS8 172 aa8.32□□□□□ -1.08
SCAMP3-208ENST00000490999 TRBV10-3A0A0K0K1G6 114 aa8.31□□□□□ -1.08
SCAMP3-208ENST00000490999 J3QQQ9 107 aa8.31□□□□□ -1.08
SCAMP3-208ENST00000490999 C9orf153Q5TBE3 101 aa8.31□□□□□ -1.08
SCAMP3-208ENST00000490999 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
SCAMP3-208ENST00000490999 KCNQ1DNQ9H478 68 aa8.31□□□□□ -1.08
SCAMP3-208ENST00000490999 LOC107984156A0A0G2JMH3 177 aa8.3□□□□□ -1.08
SCAMP3-208ENST00000490999 SSBP3-AS1Q7Z2R9 100 aa8.3□□□□□ -1.08
SCAMP3-208ENST00000490999 ARL17AQ8IVW1 177 aa8.3□□□□□ -1.08
SCAMP3-208ENST00000490999 B5MCH6 92 aa8.28□□□□□ -1.08
SCAMP3-208ENST00000490999 LGALS3P17931 250 aaKnown RBP8.28□□□□□ -1.08
SCAMP3-208ENST00000490999 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
SCAMP3-208ENST00000490999 PMCHL2Q9BQD1 86 aa8.28□□□□□ -1.08
SCAMP3-208ENST00000490999 Q9BRP9 147 aa8.28□□□□□ -1.08
SCAMP3-208ENST00000490999 SYS1-DBNDD2H3BUS1 97 aa8.27□□□□□ -1.09
SCAMP3-208ENST00000490999 E9PLD3 99 aa8.26□□□□□ -1.09
SCAMP3-208ENST00000490999 PET117Q6UWS5 81 aa8.26□□□□□ -1.09
SCAMP3-208ENST00000490999 S100A12P80511 92 aa8.25□□□□□ -1.09
SCAMP3-208ENST00000490999 COA6Q5JTJ3 125 aaKnown RBP8.25□□□□□ -1.09
SCAMP3-208ENST00000490999 LINC01545Q5VT33 79 aa8.25□□□□□ -1.09
SCAMP3-208ENST00000490999 COX6B2Q6YFQ2 88 aa8.25□□□□□ -1.09
SCAMP3-208ENST00000490999 TRBV10-2A0A0K0K1G8 114 aa8.24□□□□□ -1.09
SCAMP3-208ENST00000490999 HRCT1Q6UXD1 115 aa8.23□□□□□ -1.09
SCAMP3-208ENST00000490999 MIEN1Q9BRT3 115 aa8.23□□□□□ -1.09
SCAMP3-208ENST00000490999 NDUFC2O95298 119 aa8.22□□□□□ -1.09
SCAMP3-208ENST00000490999 A0A0J9YXY3 114 aa8.21□□□□□ -1.1
SCAMP3-208ENST00000490999 Q6ZRX8 168 aa8.21□□□□□ -1.1
SCAMP3-208ENST00000490999 SPANXB1Q9NS25 103 aaPredicted RBP8.21□□□□□ -1.1
SCAMP3-208ENST00000490999 C3orf79P0CE67 100 aa8.2□□□□□ -1.1
SCAMP3-208ENST00000490999 ST20-AS1Q8NBB2 130 aa8.2□□□□□ -1.1
SCAMP3-208ENST00000490999 DDTP30046 118 aa8.19□□□□□ -1.1
SCAMP3-208ENST00000490999 FCGBPQ9Y6R7 5405 aaPredicted RBP8.19□□□□□ -1.1
SCAMP3-208ENST00000490999 TIMM17BO60830 172 aa8.18□□□□□ -1.1
SCAMP3-208ENST00000490999 IGLV6-57P01721 117 aa8.18□□□□□ -1.1
SCAMP3-208ENST00000490999 AKR1D1P51857 326 aa8.18□□□□□ -1.1
SCAMP3-208ENST00000490999 LIMD2Q9BT23 127 aa8.17□□□□□ -1.1
SCAMP3-208ENST00000490999 CBY1Q9Y3M2 126 aa8.17□□□□□ -1.1
SCAMP3-208ENST00000490999 C20orf202A1L168 122 aa8.16□□□□□ -1.1
SCAMP3-208ENST00000490999 S100A1P23297 94 aa8.16□□□□□ -1.1
SCAMP3-208ENST00000490999 KRTDAPP60985 99 aa8.16□□□□□ -1.1
SCAMP3-208ENST00000490999 S100A7L2Q5SY68 101 aa8.16□□□□□ -1.1
SCAMP3-208ENST00000490999 ADAMTSL4-AS1Q5T5F5 129 aa8.16□□□□□ -1.1
SCAMP3-208ENST00000490999 ZNF815PA8K554 130 aa8.14□□□□□ -1.11
SCAMP3-208ENST00000490999 SOSTDC1Q6X4U4 206 aa8.14□□□□□ -1.11
SCAMP3-208ENST00000490999 LITAFQ99732 161 aa8.14□□□□□ -1.11
SCAMP3-208ENST00000490999 LINC00308Q8TCZ7 52 aa8.13□□□□□ -1.11
SCAMP3-208ENST00000490999 SPANXCQ9NY87 97 aa8.13□□□□□ -1.11
SCAMP3-208ENST00000490999 NPC2P61916 151 aa8.12□□□□□ -1.11
SCAMP3-208ENST00000490999 JOSD1Q15040 202 aaPredicted RBP8.12□□□□□ -1.11
SCAMP3-208ENST00000490999 TRAV23DV6A0A075B6W5 121 aa8.11□□□□□ -1.11
SCAMP3-208ENST00000490999 EIF4EBP3O60516 100 aaPredicted RBP8.11□□□□□ -1.11
SCAMP3-208ENST00000490999 RPL37P61927 97 aaKnown RBP8.11□□□□□ -1.11
SCAMP3-208ENST00000490999 H7C2G1 150 aa8.1□□□□□ -1.11
SCAMP3-208ENST00000490999 HINT1P49773 126 aaPredicted RBP8.1□□□□□ -1.11
SCAMP3-208ENST00000490999 SNRPEP62304 92 aaKnown RBP8.1□□□□□ -1.11
SCAMP3-208ENST00000490999 LINC00518Q8N0U6 118 aa8.1□□□□□ -1.11
SCAMP3-208ENST00000490999 COPS9Q8WXC6 57 aa8.1□□□□□ -1.11
SCAMP3-208ENST00000490999 ZNF73O43830 326 aaPredicted RBP8.09□□□□□ -1.11
SCAMP3-208ENST00000490999 C5orf52A6NGY3 159 aa8.08□□□□□ -1.12
SCAMP3-208ENST00000490999 SCGB1D4Q6XE38 83 aa8.08□□□□□ -1.12
SCAMP3-208ENST00000490999 Q6ZVH6 145 aa8.08□□□□□ -1.12
SCAMP3-208ENST00000490999 SPANXDQ9BXN6 97 aa8.08□□□□□ -1.12
SCAMP3-208ENST00000490999 IFITM1P13164 125 aa8.07□□□□□ -1.12
SCAMP3-208ENST00000490999 TTTY13Q9BZ97 58 aa8.07□□□□□ -1.12
SCAMP3-208ENST00000490999 S100A2P29034 98 aa8.06□□□□□ -1.12
SCAMP3-208ENST00000490999 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
SCAMP3-208ENST00000490999 Q6Q795 121 aa8.06□□□□□ -1.12
SCAMP3-208ENST00000490999 HIST3H2BBQ8N257 126 aa8.06□□□□□ -1.12
SCAMP3-208ENST00000490999 OR13C6PQ8NH95 151 aa8.06□□□□□ -1.12
SCAMP3-208ENST00000490999 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
SCAMP3-208ENST00000490999 S100A6P06703 90 aa8.04□□□□□ -1.12
SCAMP3-208ENST00000490999 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
SCAMP3-208ENST00000490999 SPRR1BP22528 89 aa8.03□□□□□ -1.12
SCAMP3-208ENST00000490999 HIST1H2BLQ99880 126 aa8.03□□□□□ -1.12
SCAMP3-208ENST00000490999 Q1RN00 199 aa8.02□□□□□ -1.13
SCAMP3-208ENST00000490999 C1orf195Q5TG92 126 aa8.02□□□□□ -1.13
SCAMP3-208ENST00000490999 DHRS4-AS1Q9P1J3 65 aa8.02□□□□□ -1.13
SCAMP3-208ENST00000490999 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
SCAMP3-208ENST00000490999 PCP2Q8IVA1 136 aa8.01□□□□□ -1.13
SCAMP3-208ENST00000490999 LAMTOR3Q9UHA4 124 aa8.01□□□□□ -1.13
SCAMP3-208ENST00000490999 A0A0G2JQZ4 141 aa8□□□□□ -1.13
SCAMP3-208ENST00000490999 TRBV7-6A0A0J9YX20 115 aa8□□□□□ -1.13
SCAMP3-208ENST00000490999 HSBP1L1C9JCN9 74 aa8□□□□□ -1.13
SCAMP3-208ENST00000490999 SLC25A34Q6PIV7 304 aa8□□□□□ -1.13
SCAMP3-208ENST00000490999 KRTAP9-8Q9BYQ0 159 aa7.99□□□□□ -1.13
SCAMP3-208ENST00000490999 COX7BP24311 80 aa7.98□□□□□ -1.13
SCAMP3-208ENST00000490999 ELOF1P60002 83 aaKnown RBP7.98□□□□□ -1.13
SCAMP3-208ENST00000490999 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms