RNA–Protein interactions for RNA: ENST00000490690.1

SHROOM3-209, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 504 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-209ENST00000490690 ETDCA0A1B0GVM5 59 aa12.18□□□□□ -0.46
SHROOM3-209ENST00000490690 A6NDN8 102 aa12.18□□□□□ -0.46
SHROOM3-209ENST00000490690 H0Y9J4 135 aa12.18□□□□□ -0.46
SHROOM3-209ENST00000490690 SPRR1AP35321 89 aa12.18□□□□□ -0.46
SHROOM3-209ENST00000490690 FAM19A1Q7Z5A9 133 aa12.18□□□□□ -0.46
SHROOM3-209ENST00000490690 CEND1Q8N111 149 aa12.18□□□□□ -0.46
SHROOM3-209ENST00000490690 ZNF73O43830 326 aaPredicted RBP12.16□□□□□ -0.46
SHROOM3-209ENST00000490690 KRTAP17-1Q9BYP8 105 aa12.15□□□□□ -0.46
SHROOM3-209ENST00000490690 RAB37Q96AX2 223 aa12.13□□□□□ -0.47
SHROOM3-209ENST00000490690 A0A0B4J2C4 111 aa12.12□□□□□ -0.47
SHROOM3-209ENST00000490690 KRTAP4-5Q9BYR2 181 aa12.11□□□□□ -0.47
SHROOM3-209ENST00000490690 PRO1933Q9H354 126 aa12.11□□□□□ -0.47
SHROOM3-209ENST00000490690 TRBV7-6A0A0J9YX20 115 aa12.1□□□□□ -0.47
SHROOM3-209ENST00000490690 KRTAP4-16G5E9R7 235 aaPredicted RBP12.1□□□□□ -0.47
SHROOM3-209ENST00000490690 KRTAP13-1Q8IUC0 172 aa12.1□□□□□ -0.47
SHROOM3-209ENST00000490690 SRRM2Q9UQ35 2752 aaKnown RBP12.09□□□□□ -0.47
SHROOM3-209ENST00000490690 PRLHP81277 87 aa12.08□□□□□ -0.48
SHROOM3-209ENST00000490690 VAMP3Q15836 100 aa12.08□□□□□ -0.48
SHROOM3-209ENST00000490690 Q6ZRX8 168 aa12.08□□□□□ -0.48
SHROOM3-209ENST00000490690 B5MCH6 92 aa12.07□□□□□ -0.48
SHROOM3-209ENST00000490690 M0R143 59 aa12.07□□□□□ -0.48
SHROOM3-209ENST00000490690 A0A1B0GWB2 263 aa12.06□□□□□ -0.48
SHROOM3-209ENST00000490690 CFC1BP0CG36 223 aa12.06□□□□□ -0.48
SHROOM3-209ENST00000490690 CFC1P0CG37 223 aa12.06□□□□□ -0.48
SHROOM3-209ENST00000490690 RPL13AP40429 203 aaKnown RBP12.06□□□□□ -0.48
SHROOM3-209ENST00000490690 C6orf99Q4VX62 202 aa12.06□□□□□ -0.48
SHROOM3-209ENST00000490690 HIGD2AQ9BW72 106 aa12.06□□□□□ -0.48
SHROOM3-209ENST00000490690 ZNF706Q9Y5V0 76 aaPredicted RBP12.06□□□□□ -0.48
SHROOM3-209ENST00000490690 OXTP01178 125 aa12.05□□□□□ -0.48
SHROOM3-209ENST00000490690 FXYD2P54710 66 aa12.05□□□□□ -0.48
SHROOM3-209ENST00000490690 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
SHROOM3-209ENST00000490690 COX7BP24311 80 aa12.04□□□□□ -0.48
SHROOM3-209ENST00000490690 PRO1854Q9UHT4 67 aa12.04□□□□□ -0.48
SHROOM3-209ENST00000490690 ELOF1P60002 83 aaKnown RBP12.03□□□□□ -0.48
SHROOM3-209ENST00000490690 BVES-AS1Q5T3Y7 98 aa12.03□□□□□ -0.48
SHROOM3-209ENST00000490690 SMIM11BQ8TCY0 68 aa12.03□□□□□ -0.48
SHROOM3-209ENST00000490690 NHP2Q9NX24 153 aaKnown RBP12.03□□□□□ -0.48
SHROOM3-209ENST00000490690 Q1RN00 199 aa12□□□□□ -0.49
SHROOM3-209ENST00000490690 CTAG1AP78358 180 aa11.99□□□□□ -0.49
SHROOM3-209ENST00000490690 SLC25A20O43772 301 aa11.98□□□□□ -0.49
SHROOM3-209ENST00000490690 SNCGO76070 127 aa11.98□□□□□ -0.49
SHROOM3-209ENST00000490690 KRTAP29-1A8MX34 341 aaPredicted RBP11.97□□□□□ -0.49
SHROOM3-209ENST00000490690 SMCR5Q8TEV8 140 aa11.97□□□□□ -0.49
SHROOM3-209ENST00000490690 FLG2Q5D862 2391 aaPredicted RBP11.95□□□□□ -0.5
SHROOM3-209ENST00000490690 H7C2G1 150 aa11.95□□□□□ -0.5
SHROOM3-209ENST00000490690 FAM229BQ4G0N7 80 aa11.95□□□□□ -0.5
SHROOM3-209ENST00000490690 LINC01600Q96MT4 127 aa11.95□□□□□ -0.5
SHROOM3-209ENST00000490690 Q9BRP9 147 aa11.95□□□□□ -0.5
SHROOM3-209ENST00000490690 H0YGX0 51 aa11.94□□□□□ -0.5
SHROOM3-209ENST00000490690 PKHD1L1Q86WI1 4243 aa11.93□□□□□ -0.5
SHROOM3-209ENST00000490690 ABCA13Q86UQ4 5058 aa11.92□□□□□ -0.5
SHROOM3-209ENST00000490690 COX6CP09669 75 aa11.92□□□□□ -0.5
SHROOM3-209ENST00000490690 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
SHROOM3-209ENST00000490690 CRYGAP11844 174 aa11.91□□□□□ -0.5
SHROOM3-209ENST00000490690 J3QL48 77 aa11.9□□□□□ -0.5
SHROOM3-209ENST00000490690 KRTAP1-4P0C5Y4 121 aa11.9□□□□□ -0.5
SHROOM3-209ENST00000490690 PSMB2P49721 201 aa11.88□□□□□ -0.51
SHROOM3-209ENST00000490690 LINC00575Q6W349 94 aa11.88□□□□□ -0.51
SHROOM3-209ENST00000490690 A0A1B0GX51 115 aa11.87□□□□□ -0.51
SHROOM3-209ENST00000490690 K7ERJ3 54 aa11.87□□□□□ -0.51
SHROOM3-209ENST00000490690 hADV29S1A0JD25 119 aa11.86□□□□□ -0.51
SHROOM3-209ENST00000490690 ERC2-IT1O76042 136 aa11.86□□□□□ -0.51
SHROOM3-209ENST00000490690 GHRHP01286 108 aa11.86□□□□□ -0.51
SHROOM3-209ENST00000490690 LINC00483Q53H64 154 aa11.86□□□□□ -0.51
SHROOM3-209ENST00000490690 GAGE2AQ6NT46 116 aa11.85□□□□□ -0.51
SHROOM3-209ENST00000490690 TSPAN13O95857 204 aa11.84□□□□□ -0.51
SHROOM3-209ENST00000490690 MYCBP2O75592 4640 aa11.82□□□□□ -0.52
SHROOM3-209ENST00000490690 TRIAP1O43715 76 aa11.82□□□□□ -0.52
SHROOM3-209ENST00000490690 OCIAD2Q56VL3 154 aa11.82□□□□□ -0.52
SHROOM3-209ENST00000490690 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.82□□□□□ -0.52
SHROOM3-209ENST00000490690 TEX49A0A1B0GTD5 131 aa11.81□□□□□ -0.52
SHROOM3-209ENST00000490690 SPRR1BP22528 89 aa11.81□□□□□ -0.52
SHROOM3-209ENST00000490690 BATFQ16520 125 aa11.81□□□□□ -0.52
SHROOM3-209ENST00000490690 PRR26Q8N8Z3 221 aa11.81□□□□□ -0.52
SHROOM3-209ENST00000490690 LYRM7Q5U5X0 104 aa11.8□□□□□ -0.52
SHROOM3-209ENST00000490690 PPDPFLQ8WWR9 84 aa11.8□□□□□ -0.52
SHROOM3-209ENST00000490690 KRTAP10-8P60410 259 aa11.79□□□□□ -0.52
SHROOM3-209ENST00000490690 TYMSOSQ8TAI1 123 aa11.79□□□□□ -0.52
SHROOM3-209ENST00000490690 LAMTOR3Q9UHA4 124 aa11.79□□□□□ -0.52
SHROOM3-209ENST00000490690 IGLV5-48A0A075B6I7 105 aa11.78□□□□□ -0.52
SHROOM3-209ENST00000490690 SCGB1C2P0DMR2 95 aa11.78□□□□□ -0.52
SHROOM3-209ENST00000490690 ST20-AS1Q8NBB2 130 aa11.78□□□□□ -0.52
SHROOM3-209ENST00000490690 PCLOQ9Y6V0 5065 aa11.78□□□□□ -0.52
SHROOM3-209ENST00000490690 H3BQ85 93 aa11.77□□□□□ -0.53
SHROOM3-209ENST00000490690 DNAL4O96015 105 aa11.77□□□□□ -0.53
SHROOM3-209ENST00000490690 A0A087X002 238 aa11.76□□□□□ -0.53
SHROOM3-209ENST00000490690 Q6ZQY7 126 aa11.76□□□□□ -0.53
SHROOM3-209ENST00000490690 ANAPC11Q9NYG5 84 aa11.76□□□□□ -0.53
SHROOM3-209ENST00000490690 FAT3Q8TDW7 4589 aa11.76□□□□□ -0.53
SHROOM3-209ENST00000490690 DMBT1Q9UGM3 2413 aaPredicted RBP11.75□□□□□ -0.53
SHROOM3-209ENST00000490690 MT1HL1P0DM35 61 aa11.75□□□□□ -0.53
SHROOM3-209ENST00000490690 DEFB105AQ8NG35 78 aa11.74□□□□□ -0.53
SHROOM3-209ENST00000490690 LRP1Q07954 4544 aaKnown RBP11.74□□□□□ -0.53
SHROOM3-209ENST00000490690 SSBP3-AS1Q7Z2R9 100 aa11.73□□□□□ -0.53
SHROOM3-209ENST00000490690 F8WEM9 126 aa11.7□□□□□ -0.54
SHROOM3-209ENST00000490690 KRTAP13-2Q52LG2 175 aa11.7□□□□□ -0.54
SHROOM3-209ENST00000490690 Q8NBF4 154 aa11.7□□□□□ -0.54
SHROOM3-209ENST00000490690 FAM218AQ96MZ4 157 aa11.7□□□□□ -0.54
SHROOM3-209ENST00000490690 IGLV9-49A0A0B4J1Y8 123 aa11.69□□□□□ -0.54
SHROOM3-209ENST00000490690 TRACP01848 142 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms