RNA–Protein interactions for RNA: ENST00000490677.1

HOXB3-211, Transcript of homeobox B3, humanhuman

TSL 1 (best) BASIC

Gene HOXB3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-211ENST00000490677 HIST1H2BCP62807 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST2H2BEQ16778 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST1H2BHQ93079 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 LITAFQ99732 161 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST1H2BNQ99877 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 HIST1H2BMQ99879 126 aa15.7■□□□□ 0.1
HOXB3-211ENST00000490677 SYS1-DBNDD2H3BUS1 97 aa15.69■□□□□ 0.1
HOXB3-211ENST00000490677 KRTAP13-3Q3SY46 172 aa15.69■□□□□ 0.1
HOXB3-211ENST00000490677 MOBPQ13875 183 aa15.68■□□□□ 0.1
HOXB3-211ENST00000490677 S100A7L2Q5SY68 101 aa15.68■□□□□ 0.1
HOXB3-211ENST00000490677 TRAV23DV6A0A075B6W5 121 aa15.67■□□□□ 0.1
HOXB3-211ENST00000490677 IGLV9-49A0A0B4J1Y8 123 aa15.65■□□□□ 0.1
HOXB3-211ENST00000490677 ZNF73O43830 326 aaPredicted RBP15.64■□□□□ 0.09
HOXB3-211ENST00000490677 LINC01545Q5VT33 79 aa15.64■□□□□ 0.09
HOXB3-211ENST00000490677 SSBP3-AS1Q7Z2R9 100 aa15.64■□□□□ 0.09
HOXB3-211ENST00000490677 RPS29P62273 56 aaKnown RBP15.62■□□□□ 0.09
HOXB3-211ENST00000490677 Q8N377 158 aa15.62■□□□□ 0.09
HOXB3-211ENST00000490677 LINC00308Q8TCZ7 52 aa15.6■□□□□ 0.09
HOXB3-211ENST00000490677 JOSD1Q15040 202 aaPredicted RBP15.59■□□□□ 0.09
HOXB3-211ENST00000490677 ST20-AS1Q8NBB2 130 aa15.59■□□□□ 0.09
HOXB3-211ENST00000490677 TIMM17BO60830 172 aa15.58■□□□□ 0.08
HOXB3-211ENST00000490677 PET117Q6UWS5 81 aa15.57■□□□□ 0.08
HOXB3-211ENST00000490677 SPANXCQ9NY87 97 aa15.57■□□□□ 0.08
HOXB3-211ENST00000490677 TTTY13Q9BZ97 58 aa15.56■□□□□ 0.08
HOXB3-211ENST00000490677 C3orf79P0CE67 100 aa15.53■□□□□ 0.08
HOXB3-211ENST00000490677 C5orf52A6NGY3 159 aa15.52■□□□□ 0.08
HOXB3-211ENST00000490677 ASB16-AS1Q495Z4 193 aa15.52■□□□□ 0.08
HOXB3-211ENST00000490677 ZNF815PA8K554 130 aa15.51■□□□□ 0.07
HOXB3-211ENST00000490677 COA6Q5JTJ3 125 aaKnown RBP15.5■□□□□ 0.07
HOXB3-211ENST00000490677 SPRR1BP22528 89 aa15.49■□□□□ 0.07
HOXB3-211ENST00000490677 SLC25A20O43772 301 aa15.48■□□□□ 0.07
HOXB3-211ENST00000490677 C9orf153Q5TBE3 101 aa15.48■□□□□ 0.07
HOXB3-211ENST00000490677 CBY1Q9Y3M2 126 aa15.48■□□□□ 0.07
HOXB3-211ENST00000490677 SPANXDQ9BXN6 97 aa15.47■□□□□ 0.07
HOXB3-211ENST00000490677 KRTAP4-1Q9BYQ7 146 aa15.47■□□□□ 0.07
HOXB3-211ENST00000490677 OR13C6PQ8NH95 151 aa15.46■□□□□ 0.07
HOXB3-211ENST00000490677 HINT1P49773 126 aaPredicted RBP15.44■□□□□ 0.06
HOXB3-211ENST00000490677 KRTAP9-2Q9BYQ4 174 aa15.44■□□□□ 0.06
HOXB3-211ENST00000490677 ELOF1P60002 83 aaKnown RBP15.41■□□□□ 0.06
HOXB3-211ENST00000490677 DHRS4-AS1Q9P1J3 65 aa15.41■□□□□ 0.06
HOXB3-211ENST00000490677 KRTDAPP60985 99 aa15.39■□□□□ 0.05
HOXB3-211ENST00000490677 C6orf99Q4VX62 202 aa15.39■□□□□ 0.05
HOXB3-211ENST00000490677 ANKRD39Q53RE8 183 aa15.39■□□□□ 0.05
HOXB3-211ENST00000490677 LINC00518Q8N0U6 118 aa15.38■□□□□ 0.05
HOXB3-211ENST00000490677 XP32Q5T750 250 aa15.37■□□□□ 0.05
HOXB3-211ENST00000490677 COX7BP24311 80 aa15.35■□□□□ 0.05
HOXB3-211ENST00000490677 SEC61BP60468 96 aaKnown RBP15.34■□□□□ 0.05
HOXB3-211ENST00000490677 SLC25A34Q6PIV7 304 aa15.31■□□□□ 0.04
HOXB3-211ENST00000490677 TRBV7-6A0A0J9YX20 115 aa15.3■□□□□ 0.04
HOXB3-211ENST00000490677 SCGB1D4Q6XE38 83 aa15.3■□□□□ 0.04
HOXB3-211ENST00000490677 ATOH7Q8N100 152 aa15.3■□□□□ 0.04
HOXB3-211ENST00000490677 PCP2Q8IVA1 136 aa15.29■□□□□ 0.04
HOXB3-211ENST00000490677 LAMTOR3Q9UHA4 124 aa15.29■□□□□ 0.04
HOXB3-211ENST00000490677 IFITM1P13164 125 aa15.27■□□□□ 0.04
HOXB3-211ENST00000490677 LINC01547P58512 204 aaPredicted RBP15.27■□□□□ 0.04
HOXB3-211ENST00000490677 HRCT1Q6UXD1 115 aa15.27■□□□□ 0.04
HOXB3-211ENST00000490677 C20orf202A1L168 122 aa15.26■□□□□ 0.03
HOXB3-211ENST00000490677 SMIM29Q86T20 159 aa15.26■□□□□ 0.03
HOXB3-211ENST00000490677 Q1RN00 199 aa15.25■□□□□ 0.03
HOXB3-211ENST00000490677 Q6ZVH6 145 aa15.24■□□□□ 0.03
HOXB3-211ENST00000490677 MUSTN1Q8IVN3 82 aa15.24■□□□□ 0.03
HOXB3-211ENST00000490677 LIMD2Q9BT23 127 aa15.24■□□□□ 0.03
HOXB3-211ENST00000490677 TEX49A0A1B0GTD5 131 aa15.23■□□□□ 0.03
HOXB3-211ENST00000490677 A0A1B0GWB2 263 aa15.23■□□□□ 0.03
HOXB3-211ENST00000490677 TAL2Q16559 108 aa15.23■□□□□ 0.03
HOXB3-211ENST00000490677 DEFB105AQ8NG35 78 aa15.23■□□□□ 0.03
HOXB3-211ENST00000490677 IGLV5-48A0A075B6I7 105 aa15.21■□□□□ 0.03
HOXB3-211ENST00000490677 CD164Q04900 197 aa15.21■□□□□ 0.03
HOXB3-211ENST00000490677 COPS9Q8WXC6 57 aa15.21■□□□□ 0.03
HOXB3-211ENST00000490677 A6NDN8 102 aa15.19■□□□□ 0.02
HOXB3-211ENST00000490677 PRO1933Q9H354 126 aa15.17■□□□□ 0.02
HOXB3-211ENST00000490677 S100A1P23297 94 aa15.16■□□□□ 0.02
HOXB3-211ENST00000490677 Q5XG85 94 aa15.14■□□□□ 0.01
HOXB3-211ENST00000490677 SMIM11BQ8TCY0 68 aa15.14■□□□□ 0.01
HOXB3-211ENST00000490677 A0A0G2JQZ4 141 aa15.13■□□□□ 0.01
HOXB3-211ENST00000490677 AKR1D1P51857 326 aa15.13■□□□□ 0.01
HOXB3-211ENST00000490677 LCE2CQ5TA81 110 aa15.13■□□□□ 0.01
HOXB3-211ENST00000490677 KRTAP19-2Q3LHN2 52 aa15.12■□□□□ 0.01
HOXB3-211ENST00000490677 TRAV13-2A0A0B4J235 113 aa15.1■□□□□ 0.01
HOXB3-211ENST00000490677 A4D1N5 150 aa15.1■□□□□ 0.01
HOXB3-211ENST00000490677 C9orf92A6NGG3 77 aa15.1■□□□□ 0.01
HOXB3-211ENST00000490677 H7C2G1 150 aa15.1■□□□□ 0.01
HOXB3-211ENST00000490677 SNRPEP62304 92 aaKnown RBP15.1■□□□□ 0.01
HOXB3-211ENST00000490677 HIST3H2BBQ8N257 126 aa15.1■□□□□ 0.01
HOXB3-211ENST00000490677 HIST1H2BLQ99880 126 aa15.08■□□□□ 0
HOXB3-211ENST00000490677 C1orf195Q5TG92 126 aa15.06■□□□□ 0
HOXB3-211ENST00000490677 PCOTHQ58A44 107 aa15.05■□□□□ -0
HOXB3-211ENST00000490677 NHP2Q9NX24 153 aaKnown RBP15.02■□□□□ -0
HOXB3-211ENST00000490677 LINC00575Q6W349 94 aa14.98□□□□□ -0.01
HOXB3-211ENST00000490677 IGLV8-61A0A075B6I0 122 aa14.96□□□□□ -0.01
HOXB3-211ENST00000490677 KRTAP9-6A0A140TA67 174 aa14.95□□□□□ -0.02
HOXB3-211ENST00000490677 S100A2P29034 98 aa14.94□□□□□ -0.02
HOXB3-211ENST00000490677 HSBP1L1C9JCN9 74 aa14.9□□□□□ -0.02
HOXB3-211ENST00000490677 VAMP3Q15836 100 aa14.9□□□□□ -0.02
HOXB3-211ENST00000490677 Q6ZQY7 126 aa14.9□□□□□ -0.02
HOXB3-211ENST00000490677 MT1HP80294 61 aa14.88□□□□□ -0.03
HOXB3-211ENST00000490677 LCE2DQ5TA82 110 aaPredicted RBP14.88□□□□□ -0.03
HOXB3-211ENST00000490677 hADV29S1A0JD25 119 aa14.87□□□□□ -0.03
HOXB3-211ENST00000490677 RPL37P61927 97 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms