RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CELSR2Q9HCU4 2923 aa9.64□□□□□ -0.87
ARHGEF39-205ENST00000490638 APLNQ9ULZ1 77 aa9.63□□□□□ -0.87
ARHGEF39-205ENST00000490638 A0A087WSZ3 146 aa9.62□□□□□ -0.87
ARHGEF39-205ENST00000490638 CHKB-CPT1BH3BT56 60 aa9.62□□□□□ -0.87
ARHGEF39-205ENST00000490638 ATP5EP2Q5VTU8 51 aa9.62□□□□□ -0.87
ARHGEF39-205ENST00000490638 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
ARHGEF39-205ENST00000490638 Q6ZRP5 223 aa9.61□□□□□ -0.87
ARHGEF39-205ENST00000490638 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
ARHGEF39-205ENST00000490638 HRNRQ86YZ3 2850 aaPredicted RBP9.6□□□□□ -0.87
ARHGEF39-205ENST00000490638 SVIPQ8NHG7 77 aa9.59□□□□□ -0.87
ARHGEF39-205ENST00000490638 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
ARHGEF39-205ENST00000490638 A0A087WTM6 91 aa9.59□□□□□ -0.87
ARHGEF39-205ENST00000490638 J3KT08 172 aa9.59□□□□□ -0.87
ARHGEF39-205ENST00000490638 MOBPQ13875 183 aa9.54□□□□□ -0.88
ARHGEF39-205ENST00000490638 CRYGAP11844 174 aa9.54□□□□□ -0.88
ARHGEF39-205ENST00000490638 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
ARHGEF39-205ENST00000490638 CASC2Q6XLA1 102 aa9.54□□□□□ -0.88
ARHGEF39-205ENST00000490638 PRO0461Q9UI25 63 aa9.54□□□□□ -0.88
ARHGEF39-205ENST00000490638 UQCRQO14949 82 aa9.53□□□□□ -0.88
ARHGEF39-205ENST00000490638 C9orf163Q8N9P6 203 aa9.53□□□□□ -0.88
ARHGEF39-205ENST00000490638 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
ARHGEF39-205ENST00000490638 C15orf56Q8N910 161 aa9.53□□□□□ -0.88
ARHGEF39-205ENST00000490638 FAM168BA1KXE4 195 aa9.52□□□□□ -0.88
ARHGEF39-205ENST00000490638 SMCPP49901 116 aaPredicted RBP9.52□□□□□ -0.88
ARHGEF39-205ENST00000490638 NF1P21359 2839 aa9.52□□□□□ -0.88
ARHGEF39-205ENST00000490638 IGHV6-1A0A0B4J1U7 121 aa9.52□□□□□ -0.89
ARHGEF39-205ENST00000490638 C20orf197Q8N268 126 aa9.52□□□□□ -0.89
ARHGEF39-205ENST00000490638 LINC00476Q8WZB0 136 aa9.52□□□□□ -0.89
ARHGEF39-205ENST00000490638 VPREB1P12018 145 aa9.51□□□□□ -0.89
ARHGEF39-205ENST00000490638 DMBT1Q9UGM3 2413 aaPredicted RBP9.51□□□□□ -0.89
ARHGEF39-205ENST00000490638 DEFB116Q30KQ4 102 aa9.51□□□□□ -0.89
ARHGEF39-205ENST00000490638 Q6Q795 121 aa9.51□□□□□ -0.89
ARHGEF39-205ENST00000490638 Q6ZRX8 168 aa9.51□□□□□ -0.89
ARHGEF39-205ENST00000490638 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
ARHGEF39-205ENST00000490638 LIMD2Q9BT23 127 aa9.51□□□□□ -0.89
ARHGEF39-205ENST00000490638 LINC00336Q6ZUF6 198 aa9.5□□□□□ -0.89
ARHGEF39-205ENST00000490638 C3orf22Q8N5N4 141 aa9.5□□□□□ -0.89
ARHGEF39-205ENST00000490638 PLA2G1BP04054 148 aaKnown RBP9.5□□□□□ -0.89
ARHGEF39-205ENST00000490638 CASC10Q5T4H9 136 aa9.5□□□□□ -0.89
ARHGEF39-205ENST00000490638 BCE1O60756 84 aa9.49□□□□□ -0.89
ARHGEF39-205ENST00000490638 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
ARHGEF39-205ENST00000490638 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
ARHGEF39-205ENST00000490638 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
ARHGEF39-205ENST00000490638 ELOF1P60002 83 aaKnown RBP9.47□□□□□ -0.89
ARHGEF39-205ENST00000490638 BSNQ9UPA5 3926 aa9.47□□□□□ -0.89
ARHGEF39-205ENST00000490638 TYMSOSQ8TAI1 123 aa9.47□□□□□ -0.89
ARHGEF39-205ENST00000490638 ZNF575Q86XF7 245 aa9.46□□□□□ -0.9
ARHGEF39-205ENST00000490638 IMUPQ9GZP8 106 aa9.46□□□□□ -0.9
ARHGEF39-205ENST00000490638 TRBV7-6A0A0J9YX20 115 aa9.46□□□□□ -0.9
ARHGEF39-205ENST00000490638 ST20-AS1Q8NBB2 130 aa9.44□□□□□ -0.9
ARHGEF39-205ENST00000490638 J3QL48 77 aa9.43□□□□□ -0.9
ARHGEF39-205ENST00000490638 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
ARHGEF39-205ENST00000490638 TNP2Q05952 138 aa9.43□□□□□ -0.9
ARHGEF39-205ENST00000490638 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
ARHGEF39-205ENST00000490638 LITAFQ99732 161 aa9.43□□□□□ -0.9
ARHGEF39-205ENST00000490638 TMEM258P61165 79 aa9.43□□□□□ -0.9
ARHGEF39-205ENST00000490638 FAM240AA0A1B0GVK7 77 aa9.42□□□□□ -0.9
ARHGEF39-205ENST00000490638 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
ARHGEF39-205ENST00000490638 FAM30AQ9NZY2 134 aa9.41□□□□□ -0.9
ARHGEF39-205ENST00000490638 CSMD2Q7Z408 3487 aa9.41□□□□□ -0.9
ARHGEF39-205ENST00000490638 IGLV6-57P01721 117 aa9.4□□□□□ -0.9
ARHGEF39-205ENST00000490638 COX7CP15954 63 aa9.4□□□□□ -0.9
ARHGEF39-205ENST00000490638 FBN2P35556 2912 aa9.4□□□□□ -0.91
ARHGEF39-205ENST00000490638 IGLV1-50A0A075B6I6 118 aa9.39□□□□□ -0.91
ARHGEF39-205ENST00000490638 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
ARHGEF39-205ENST00000490638 Q6ZVQ6 151 aa9.39□□□□□ -0.91
ARHGEF39-205ENST00000490638 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
ARHGEF39-205ENST00000490638 Q8NBF4 154 aa9.38□□□□□ -0.91
ARHGEF39-205ENST00000490638 LINC00846Q9NV44 126 aa9.38□□□□□ -0.91
ARHGEF39-205ENST00000490638 KCNQ1DNQ9H478 68 aa9.37□□□□□ -0.91
ARHGEF39-205ENST00000490638 SEC61GP60059 68 aa9.37□□□□□ -0.91
ARHGEF39-205ENST00000490638 RETNLBQ9BQ08 111 aa9.37□□□□□ -0.91
ARHGEF39-205ENST00000490638 CNBPP62633 177 aaKnown RBP9.36□□□□□ -0.91
ARHGEF39-205ENST00000490638 Q8N9L7 120 aa9.36□□□□□ -0.91
ARHGEF39-205ENST00000490638 A0A087WVE0 104 aa9.36□□□□□ -0.91
ARHGEF39-205ENST00000490638 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
ARHGEF39-205ENST00000490638 ZNF861PO60384 105 aa9.35□□□□□ -0.91
ARHGEF39-205ENST00000490638 SERP2Q8N6R1 65 aa9.35□□□□□ -0.91
ARHGEF39-205ENST00000490638 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
ARHGEF39-205ENST00000490638 LINC00208Q96KT6 92 aa9.34□□□□□ -0.91
ARHGEF39-205ENST00000490638 PRR4Q16378 134 aa9.34□□□□□ -0.91
ARHGEF39-205ENST00000490638 SNURFQ9Y675 71 aa9.32□□□□□ -0.92
ARHGEF39-205ENST00000490638 VPS13CQ709C8 3753 aa9.32□□□□□ -0.92
ARHGEF39-205ENST00000490638 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
ARHGEF39-205ENST00000490638 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
ARHGEF39-205ENST00000490638 TRBV7-7A0A0K0K1E9 115 aa9.29□□□□□ -0.92
ARHGEF39-205ENST00000490638 FAM236DA0A1B0GTK5 79 aa9.28□□□□□ -0.92
ARHGEF39-205ENST00000490638 FAM236CP0DP71 79 aa9.28□□□□□ -0.92
ARHGEF39-205ENST00000490638 ZFHX3Q15911 3703 aa9.28□□□□□ -0.92
ARHGEF39-205ENST00000490638 HCG22E2RYF7 251 aa9.27□□□□□ -0.93
ARHGEF39-205ENST00000490638 PLA2G2DQ9UNK4 145 aa9.26□□□□□ -0.93
ARHGEF39-205ENST00000490638 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
ARHGEF39-205ENST00000490638 MXRA5Q9NR99 2828 aa9.25□□□□□ -0.93
ARHGEF39-205ENST00000490638 ANAPC11Q9NYG5 84 aa9.25□□□□□ -0.93
ARHGEF39-205ENST00000490638 A0A1B0GW54 56 aa9.24□□□□□ -0.93
ARHGEF39-205ENST00000490638 SSBP3-AS1Q7Z2R9 100 aa9.23□□□□□ -0.93
ARHGEF39-205ENST00000490638 IGKV2D-30A0A075B6S6 120 aa9.23□□□□□ -0.93
ARHGEF39-205ENST00000490638 IGKV2-30P06310 120 aa9.23□□□□□ -0.93
ARHGEF39-205ENST00000490638 TRAV7A0A075B6U4 112 aa9.22□□□□□ -0.93
ARHGEF39-205ENST00000490638 Q6ZQT0 140 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms