RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 SNURFQ9Y675 71 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 MINOS1-NBL1R4GNA1 71 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 POLQO75417 2590 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 MTORP42345 2549 aa1.22□□□□□ -2.21
HMGN1-218ENST00000490032 ASPMQ8IZT6 3477 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 DMDP11532 3685 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 DMXL2Q8TDJ6 3036 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 TLN1Q9Y490 2541 aaKnown RBP1.21□□□□□ -2.22
HMGN1-218ENST00000490032 ICE1Q9Y2F5 2266 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV3-64A0A075B6Q5 118 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 TRGV2A0A075B6R0 118 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 IGKV1OR2-108A0A075B7D4 117 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV3-15A0A0B4J1V0 119 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV3-21A0A0B4J1V1 117 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV7-4-1A0A0J9YVY3 117 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 A0A0J9YXV3 536 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 LOC101927531A0A1B0GV80 90 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 TRBV6-4A0A1B0GX49 114 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 C10orf142B7Z368 130 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 BUB1B-PAK6H3BSN5 160 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 H3BUA1 57 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 I3L2K1 104 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 NDUFA4O00483 81 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 LHBP01229 141 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 CLPSP04118 112 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 MSMBP08118 114 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 CGB3P0DN86 165 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 CGB7P0DN87 165 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 ACYP2P14621 99 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 COX7BP24311 80 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 WT1-ASQ06250 92 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 FBXL19-AS1Q494R0 122 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 SOSTDC1Q6X4U4 206 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 Q8NDZ9 215 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 SMIM11BQ8TCY0 68 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 ITLN2Q8WWU7 325 aaPredicted RBP1.21□□□□□ -2.22
HMGN1-218ENST00000490032 Q9BRP9 147 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 TTTY13Q9BZ97 58 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 C16orf95Q9H693 158 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 KAAG1Q9UBP8 84 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 KLK9Q9UKQ9 250 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 ARFGEF3Q5TH69 2177 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 FBN2P35556 2912 aa1.21□□□□□ -2.22
HMGN1-218ENST00000490032 SETD2Q9BYW2 2564 aaPredicted RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 NBASA2RRP1 2371 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 ALPK2Q86TB3 2170 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 IGKV1D-37A0A075B6S9 117 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 IGKV2-40A0A087WW87 121 aaPredicted RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV3-49A0A0A0MS15 119 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 IGHV3-73A0A0B4J1V6 119 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 C3orf84H3BNL1 204 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 M0QY20 66 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 NCR3O14931 201 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 UQCR11O14957 56 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 GNRH2O43555 120 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 PSCAO43653 123 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 KALRNO60229 2985 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 IGKV2D-40P01614 121 aaPredicted RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 IGKV1-16P04430 117 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 KRTAP12-1P59990 96 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 PRR3P79522 188 aaKnown RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 ESPL1Q14674 2120 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 DEFB112Q30KQ8 113 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 DEFB110Q30KQ9 67 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 FP248Q71RG6 208 aaPredicted RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 GPHB5Q86YW7 130 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 Q8N2B8 174 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 CNEP1R1Q8N9A8 125 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 DEFB108BQ8NET1 73 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 FDCSPQ8NFU4 85 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 RNASE6Q93091 150 aaKnown RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 ZNF625Q96I27 306 aaPredicted RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 TOMM7Q9P0U1 55 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 LINC00474Q9P2X8 69 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 U3KQA8 63 aa1.2□□□□□ -2.22
HMGN1-218ENST00000490032 SMG1Q96Q15 3661 aaKnown RBP1.2□□□□□ -2.22
HMGN1-218ENST00000490032 POLEQ07864 2286 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 DIDO1Q9BTC0 2240 aaKnown RBP1.19□□□□□ -2.22
HMGN1-218ENST00000490032 ANKHD1Q8IWZ3 2542 aaKnown RBP1.19□□□□□ -2.22
HMGN1-218ENST00000490032 A0A087WVE0 104 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 TRBV7-4A0A0J9YYF1 115 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 LY6HO94772 140 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 RPL39P62891 51 aaKnown RBP1.19□□□□□ -2.22
HMGN1-218ENST00000490032 BSPH1Q075Z2 132 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 FREM1Q5H8C1 2179 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 LINC00575Q6W349 94 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 Q6ZQT0 140 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 SMCR5Q8TEV8 140 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 MED12Q93074 2177 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 RPL39LQ96EH5 51 aaKnown RBP1.19□□□□□ -2.22
HMGN1-218ENST00000490032 CDKN2A-AS1Q9UH64 79 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 C22orf24Q9Y442 160 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 HIVEP3Q5T1R4 2406 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 FN1P02751 2386 aaKnown RBP1.19□□□□□ -2.22
HMGN1-218ENST00000490032 NBEAQ8NFP9 2946 aa1.19□□□□□ -2.22
HMGN1-218ENST00000490032 CCDC168Q8NDH2 2452 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 FREM2Q5SZK8 3169 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 KNL1Q8NG31 2342 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 FRYLO94915 3013 aa1.18□□□□□ -2.22
HMGN1-218ENST00000490032 MED13Q9UHV7 2174 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms