RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 S100A6P06703 90 aa11.19□□□□□ -0.62
EPHB4-207ENST00000489808 SPANXCQ9NY87 97 aa11.19□□□□□ -0.62
EPHB4-207ENST00000489808 ZNF706Q9Y5V0 76 aaPredicted RBP11.19□□□□□ -0.62
EPHB4-207ENST00000489808 SCGB1D4Q6XE38 83 aa11.18□□□□□ -0.62
EPHB4-207ENST00000489808 TRAV23DV6A0A075B6W5 121 aa11.17□□□□□ -0.62
EPHB4-207ENST00000489808 SNRPEP62304 92 aaKnown RBP11.17□□□□□ -0.62
EPHB4-207ENST00000489808 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
EPHB4-207ENST00000489808 LPAP08519 4548 aa11.16□□□□□ -0.62
EPHB4-207ENST00000489808 SPANXDQ9BXN6 97 aa11.15□□□□□ -0.62
EPHB4-207ENST00000489808 ZNF73O43830 326 aaPredicted RBP11.14□□□□□ -0.63
EPHB4-207ENST00000489808 ERC2-IT1O76042 136 aa11.14□□□□□ -0.63
EPHB4-207ENST00000489808 Q6ZRX8 168 aa11.14□□□□□ -0.63
EPHB4-207ENST00000489808 C3orf22Q8N5N4 141 aa11.14□□□□□ -0.63
EPHB4-207ENST00000489808 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
EPHB4-207ENST00000489808 Q9BRP9 147 aa11.14□□□□□ -0.63
EPHB4-207ENST00000489808 CBY1Q9Y3M2 126 aa11.14□□□□□ -0.63
EPHB4-207ENST00000489808 LINC00518Q8N0U6 118 aa11.13□□□□□ -0.63
EPHB4-207ENST00000489808 LINC00304Q8N9R0 145 aa11.13□□□□□ -0.63
EPHB4-207ENST00000489808 PPDPFQ9H3Y8 114 aa11.12□□□□□ -0.63
EPHB4-207ENST00000489808 IFITM1P13164 125 aa11.11□□□□□ -0.63
EPHB4-207ENST00000489808 JOSD1Q15040 202 aaPredicted RBP11.11□□□□□ -0.63
EPHB4-207ENST00000489808 PRR4Q16378 134 aa11.11□□□□□ -0.63
EPHB4-207ENST00000489808 LINC00483Q53H64 154 aa11.11□□□□□ -0.63
EPHB4-207ENST00000489808 Q6ZVH6 145 aa11.11□□□□□ -0.63
EPHB4-207ENST00000489808 HINT1P49773 126 aaPredicted RBP11.1□□□□□ -0.63
EPHB4-207ENST00000489808 GAGE2AQ6NT46 116 aa11.1□□□□□ -0.63
EPHB4-207ENST00000489808 COPS9Q8WXC6 57 aa11.1□□□□□ -0.63
EPHB4-207ENST00000489808 C5orf52A6NGY3 159 aa11.09□□□□□ -0.63
EPHB4-207ENST00000489808 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
EPHB4-207ENST00000489808 CTAG1AP78358 180 aa11.08□□□□□ -0.64
EPHB4-207ENST00000489808 MUSTN1Q8IVN3 82 aa11.08□□□□□ -0.64
EPHB4-207ENST00000489808 SPAG11AQ6PDA7 123 aa11.05□□□□□ -0.64
EPHB4-207ENST00000489808 SCGB1D1O95968 90 aa11.04□□□□□ -0.64
EPHB4-207ENST00000489808 C6orf99Q4VX62 202 aa11.01□□□□□ -0.65
EPHB4-207ENST00000489808 C4orf48Q5BLP8 95 aa11.01□□□□□ -0.65
EPHB4-207ENST00000489808 ST20-AS1Q8NBB2 130 aa11.01□□□□□ -0.65
EPHB4-207ENST00000489808 Q8NBF4 154 aa11.01□□□□□ -0.65
EPHB4-207ENST00000489808 A6NDN8 102 aa11□□□□□ -0.65
EPHB4-207ENST00000489808 COX7BP24311 80 aa11□□□□□ -0.65
EPHB4-207ENST00000489808 DHRS4-AS1Q9P1J3 65 aa11□□□□□ -0.65
EPHB4-207ENST00000489808 ELOF1P60002 83 aaKnown RBP10.99□□□□□ -0.65
EPHB4-207ENST00000489808 SSBP3-AS1Q7Z2R9 100 aa10.99□□□□□ -0.65
EPHB4-207ENST00000489808 RNF213Q63HN8 5207 aa10.98□□□□□ -0.65
EPHB4-207ENST00000489808 IGLV9-49A0A0B4J1Y8 123 aa10.98□□□□□ -0.65
EPHB4-207ENST00000489808 RETNLBQ9BQ08 111 aa10.98□□□□□ -0.65
EPHB4-207ENST00000489808 TRBV7-6A0A0J9YX20 115 aa10.97□□□□□ -0.65
EPHB4-207ENST00000489808 MOBPQ13875 183 aa10.97□□□□□ -0.65
EPHB4-207ENST00000489808 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.65
EPHB4-207ENST00000489808 SPINK1P00995 79 aa10.94□□□□□ -0.66
EPHB4-207ENST00000489808 SPRR1BP22528 89 aa10.94□□□□□ -0.66
EPHB4-207ENST00000489808 COX8AP10176 69 aa10.93□□□□□ -0.66
EPHB4-207ENST00000489808 A0A1B0GWB2 263 aa10.92□□□□□ -0.66
EPHB4-207ENST00000489808 A4D1N5 150 aa10.91□□□□□ -0.66
EPHB4-207ENST00000489808 SMIM11BQ8TCY0 68 aa10.91□□□□□ -0.66
EPHB4-207ENST00000489808 IGLV7-46A0A075B6I9 117 aa10.9□□□□□ -0.66
EPHB4-207ENST00000489808 DLEU1O43261 78 aa10.9□□□□□ -0.66
EPHB4-207ENST00000489808 C9orf153Q5TBE3 101 aa10.89□□□□□ -0.67
EPHB4-207ENST00000489808 SLC25A34Q6PIV7 304 aa10.89□□□□□ -0.67
EPHB4-207ENST00000489808 TAL2Q16559 108 aa10.88□□□□□ -0.67
EPHB4-207ENST00000489808 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
EPHB4-207ENST00000489808 C14orf144Q96I85 54 aa10.87□□□□□ -0.67
EPHB4-207ENST00000489808 HIST1H4GQ99525 98 aa10.87□□□□□ -0.67
EPHB4-207ENST00000489808 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
EPHB4-207ENST00000489808 RPS29P62273 56 aaKnown RBP10.86□□□□□ -0.67
EPHB4-207ENST00000489808 TEX49A0A1B0GTD5 131 aa10.85□□□□□ -0.67
EPHB4-207ENST00000489808 SPATA45Q537H7 98 aa10.85□□□□□ -0.67
EPHB4-207ENST00000489808 FP248Q71RG6 208 aaPredicted RBP10.85□□□□□ -0.67
EPHB4-207ENST00000489808 PAM16Q9Y3D7 125 aa10.85□□□□□ -0.67
EPHB4-207ENST00000489808 TPRXLQ17RH7 258 aa10.84□□□□□ -0.67
EPHB4-207ENST00000489808 VAMP3Q15836 100 aa10.83□□□□□ -0.68
EPHB4-207ENST00000489808 VAMP8Q9BV40 100 aa10.83□□□□□ -0.68
EPHB4-207ENST00000489808 LINC01547P58512 204 aaPredicted RBP10.82□□□□□ -0.68
EPHB4-207ENST00000489808 NHP2Q9NX24 153 aaKnown RBP10.82□□□□□ -0.68
EPHB4-207ENST00000489808 IGLV5-48A0A075B6I7 105 aa10.81□□□□□ -0.68
EPHB4-207ENST00000489808 Q8N377 158 aa10.81□□□□□ -0.68
EPHB4-207ENST00000489808 Q1RN00 199 aa10.8□□□□□ -0.68
EPHB4-207ENST00000489808 SMIM29Q86T20 159 aa10.8□□□□□ -0.68
EPHB4-207ENST00000489808 C12orf57Q99622 126 aa10.8□□□□□ -0.68
EPHB4-207ENST00000489808 HIGD1BQ9P298 99 aa10.8□□□□□ -0.68
EPHB4-207ENST00000489808 SLC25A20O43772 301 aa10.79□□□□□ -0.68
EPHB4-207ENST00000489808 CDIP1Q9H305 208 aa10.79□□□□□ -0.68
EPHB4-207ENST00000489808 LINC00575Q6W349 94 aa10.78□□□□□ -0.68
EPHB4-207ENST00000489808 C2orf91Q6ZV80 131 aa10.76□□□□□ -0.69
EPHB4-207ENST00000489808 MUC17Q685J3 4493 aa10.76□□□□□ -0.69
EPHB4-207ENST00000489808 CFC1BP0CG36 223 aa10.75□□□□□ -0.69
EPHB4-207ENST00000489808 CFC1P0CG37 223 aa10.75□□□□□ -0.69
EPHB4-207ENST00000489808 PRO1933Q9H354 126 aa10.75□□□□□ -0.69
EPHB4-207ENST00000489808 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
EPHB4-207ENST00000489808 PYY3Q5JQD4 70 aa10.74□□□□□ -0.69
EPHB4-207ENST00000489808 HRCT1Q6UXD1 115 aa10.74□□□□□ -0.69
EPHB4-207ENST00000489808 MUC2Q02817 5179 aa10.74□□□□□ -0.69
EPHB4-207ENST00000489808 KRTAP13-3Q3SY46 172 aa10.72□□□□□ -0.69
EPHB4-207ENST00000489808 TMA7Q9Y2S6 64 aaKnown RBP10.72□□□□□ -0.69
EPHB4-207ENST00000489808 CD164Q04900 197 aa10.71□□□□□ -0.69
EPHB4-207ENST00000489808 BVES-AS1Q5T3Y7 98 aa10.71□□□□□ -0.69
EPHB4-207ENST00000489808 H7C2G1 150 aa10.7□□□□□ -0.7
EPHB4-207ENST00000489808 RAB37Q96AX2 223 aa10.7□□□□□ -0.7
EPHB4-207ENST00000489808 A0A0B4J2C4 111 aa10.69□□□□□ -0.7
EPHB4-207ENST00000489808 Q6ZQY7 126 aa10.69□□□□□ -0.7
EPHB4-207ENST00000489808 CEND1Q8N111 149 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms