RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 C10orf91Q5T1B1 145 aa9.22□□□□□ -0.93
TOP3B-217ENST00000489581 SPANXB1Q9NS25 103 aaPredicted RBP9.22□□□□□ -0.93
TOP3B-217ENST00000489581 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.94
TOP3B-217ENST00000489581 COMMD7Q86VX2 200 aa9.21□□□□□ -0.94
TOP3B-217ENST00000489581 H0Y8G0 127 aa9.2□□□□□ -0.94
TOP3B-217ENST00000489581 IGLV6-57P01721 117 aa9.2□□□□□ -0.94
TOP3B-217ENST00000489581 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
TOP3B-217ENST00000489581 IFITM2Q01629 132 aa9.2□□□□□ -0.94
TOP3B-217ENST00000489581 CHCHD1Q96BP2 118 aaKnown RBP9.2□□□□□ -0.94
TOP3B-217ENST00000489581 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
TOP3B-217ENST00000489581 MIEN1Q9BRT3 115 aa9.19□□□□□ -0.94
TOP3B-217ENST00000489581 LEPROTO15243 131 aa9.18□□□□□ -0.94
TOP3B-217ENST00000489581 ZNF73O43830 326 aaPredicted RBP9.17□□□□□ -0.94
TOP3B-217ENST00000489581 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
TOP3B-217ENST00000489581 NDUFC2O95298 119 aa9.16□□□□□ -0.94
TOP3B-217ENST00000489581 J3QQQ9 107 aa9.15□□□□□ -0.94
TOP3B-217ENST00000489581 NPC2P61916 151 aa9.15□□□□□ -0.94
TOP3B-217ENST00000489581 M0R2T5 61 aa9.14□□□□□ -0.95
TOP3B-217ENST00000489581 C5orf52A6NGY3 159 aa9.13□□□□□ -0.95
TOP3B-217ENST00000489581 HSBP1O75506 76 aa9.13□□□□□ -0.95
TOP3B-217ENST00000489581 SOSTDC1Q6X4U4 206 aa9.13□□□□□ -0.95
TOP3B-217ENST00000489581 HINT1P49773 126 aaPredicted RBP9.12□□□□□ -0.95
TOP3B-217ENST00000489581 LGALS3P17931 250 aaKnown RBP9.11□□□□□ -0.95
TOP3B-217ENST00000489581 SPRR1BP22528 89 aa9.11□□□□□ -0.95
TOP3B-217ENST00000489581 SLC7A5P1Q8MH63 180 aa9.11□□□□□ -0.95
TOP3B-217ENST00000489581 APOC3P02656 99 aa9.1□□□□□ -0.95
TOP3B-217ENST00000489581 NMUP48645 174 aa9.1□□□□□ -0.95
TOP3B-217ENST00000489581 SLC25A34Q6PIV7 304 aa9.1□□□□□ -0.95
TOP3B-217ENST00000489581 PLNP26678 52 aa9.09□□□□□ -0.95
TOP3B-217ENST00000489581 HERVK_113P61574 105 aa9.09□□□□□ -0.95
TOP3B-217ENST00000489581 ADAMTSL4-AS1Q5T5F5 129 aa9.09□□□□□ -0.95
TOP3B-217ENST00000489581 PMCHL2Q9BQD1 86 aa9.09□□□□□ -0.95
TOP3B-217ENST00000489581 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
TOP3B-217ENST00000489581 LEPROTL1O95214 131 aa9.07□□□□□ -0.96
TOP3B-217ENST00000489581 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
TOP3B-217ENST00000489581 A0A0J9YXY3 114 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 LOC105371267A0A1B0GV96 52 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 H7C2G1 150 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 DPM2O94777 84 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 OR13C6PQ8NH95 151 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 YPEL4Q96NS1 127 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 DHRS4-AS1Q9P1J3 65 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 CBY1Q9Y3M2 126 aa9.06□□□□□ -0.96
TOP3B-217ENST00000489581 FLGP20930 4061 aaPredicted RBP9.06□□□□□ -0.96
TOP3B-217ENST00000489581 SNAPINO95295 136 aa9.05□□□□□ -0.96
TOP3B-217ENST00000489581 IGKCP01834 107 aa9.04□□□□□ -0.96
TOP3B-217ENST00000489581 Q1RN00 199 aa9.04□□□□□ -0.96
TOP3B-217ENST00000489581 CD164Q04900 197 aa9.03□□□□□ -0.96
TOP3B-217ENST00000489581 TAL2Q16559 108 aa9.03□□□□□ -0.96
TOP3B-217ENST00000489581 DEFB105AQ8NG35 78 aa9.03□□□□□ -0.96
TOP3B-217ENST00000489581 FABP4P15090 132 aa9.02□□□□□ -0.97
TOP3B-217ENST00000489581 RPL37P61927 97 aaKnown RBP9.02□□□□□ -0.97
TOP3B-217ENST00000489581 C1orf195Q5TG92 126 aa9.02□□□□□ -0.97
TOP3B-217ENST00000489581 SVBPQ8N300 66 aa9.02□□□□□ -0.97
TOP3B-217ENST00000489581 PRO1933Q9H354 126 aa9.02□□□□□ -0.97
TOP3B-217ENST00000489581 SERF1AO75920 110 aa9.01□□□□□ -0.97
TOP3B-217ENST00000489581 LINC00310P59036 64 aa9.01□□□□□ -0.97
TOP3B-217ENST00000489581 LINC00308Q8TCZ7 52 aa9□□□□□ -0.97
TOP3B-217ENST00000489581 SPANXCQ9NY87 97 aa9□□□□□ -0.97
TOP3B-217ENST00000489581 HSPB8Q9UJY1 196 aa9□□□□□ -0.97
TOP3B-217ENST00000489581 COX7BP24311 80 aa8.99□□□□□ -0.97
TOP3B-217ENST00000489581 A0A0G2JQZ4 141 aa8.98□□□□□ -0.97
TOP3B-217ENST00000489581 ELOF1P60002 83 aaKnown RBP8.98□□□□□ -0.97
TOP3B-217ENST00000489581 Q5XG85 94 aa8.98□□□□□ -0.97
TOP3B-217ENST00000489581 TEX49A0A1B0GTD5 131 aa8.97□□□□□ -0.97
TOP3B-217ENST00000489581 E9PLD3 99 aa8.97□□□□□ -0.97
TOP3B-217ENST00000489581 TRGC2P03986 189 aa8.97□□□□□ -0.97
TOP3B-217ENST00000489581 AKR1D1P51857 326 aa8.97□□□□□ -0.97
TOP3B-217ENST00000489581 C6orf99Q4VX62 202 aa8.97□□□□□ -0.97
TOP3B-217ENST00000489581 LITAFQ99732 161 aa8.97□□□□□ -0.97
TOP3B-217ENST00000489581 SPANXDQ9BXN6 97 aa8.97□□□□□ -0.97
TOP3B-217ENST00000489581 SMIM29Q86T20 159 aa8.95□□□□□ -0.98
TOP3B-217ENST00000489581 TIMM17BO60830 172 aa8.91□□□□□ -0.98
TOP3B-217ENST00000489581 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
TOP3B-217ENST00000489581 KRTAP9-7A8MTY7 169 aa8.9□□□□□ -0.98
TOP3B-217ENST00000489581 S100A6P06703 90 aa8.9□□□□□ -0.98
TOP3B-217ENST00000489581 LINC00518Q8N0U6 118 aa8.9□□□□□ -0.98
TOP3B-217ENST00000489581 Q6Q795 121 aa8.89□□□□□ -0.99
TOP3B-217ENST00000489581 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.88□□□□□ -0.99
TOP3B-217ENST00000489581 IGLV5-48A0A075B6I7 105 aa8.86□□□□□ -0.99
TOP3B-217ENST00000489581 TRBV7-6A0A0J9YX20 115 aa8.86□□□□□ -0.99
TOP3B-217ENST00000489581 ZNF815PA8K554 130 aa8.86□□□□□ -0.99
TOP3B-217ENST00000489581 TCL1BO95988 128 aa8.86□□□□□ -0.99
TOP3B-217ENST00000489581 TTTY13Q9BZ97 58 aa8.86□□□□□ -0.99
TOP3B-217ENST00000489581 A0A1B0GWB2 263 aa8.85□□□□□ -0.99
TOP3B-217ENST00000489581 SYS1-DBNDD2H3BUS1 97 aa8.83□□□□□ -1
TOP3B-217ENST00000489581 PCP2Q8IVA1 136 aa8.81□□□□□ -1
TOP3B-217ENST00000489581 A6NDN8 102 aa8.8□□□□□ -1
TOP3B-217ENST00000489581 ATP11AUNQ6ZP68 121 aa8.79□□□□□ -1
TOP3B-217ENST00000489581 LINC01545Q5VT33 79 aa8.78□□□□□ -1
TOP3B-217ENST00000489581 OBSCN-AS1Q96MR7 158 aa8.77□□□□□ -1.01
TOP3B-217ENST00000489581 A4D1N5 150 aa8.76□□□□□ -1.01
TOP3B-217ENST00000489581 SCGB1D4Q6XE38 83 aa8.76□□□□□ -1.01
TOP3B-217ENST00000489581 F8WEM9 126 aa8.75□□□□□ -1.01
TOP3B-217ENST00000489581 CFC1P0CG37 223 aa8.75□□□□□ -1.01
TOP3B-217ENST00000489581 Q75L30 129 aa8.75□□□□□ -1.01
TOP3B-217ENST00000489581 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
TOP3B-217ENST00000489581 KRTAP4-8Q9BYQ9 185 aa8.75□□□□□ -1.01
TOP3B-217ENST00000489581 NHP2Q9NX24 153 aaKnown RBP8.75□□□□□ -1.01
TOP3B-217ENST00000489581 SSPOA2VEC9 5147 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms