RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 ASB16-AS1Q495Z4 193 aa6.76□□□□□ -1.33
SFXN3-207ENST00000489434 DAND5Q8N907 189 aa6.76□□□□□ -1.33
SFXN3-207ENST00000489434 C18orf32Q8TCD1 76 aa6.76□□□□□ -1.33
SFXN3-207ENST00000489434 CHTOPQ9Y3Y2 248 aaKnown RBP6.75□□□□□ -1.33
SFXN3-207ENST00000489434 HSBP1L1C9JCN9 74 aa6.74□□□□□ -1.33
SFXN3-207ENST00000489434 MEIG1Q5JSS6 88 aa6.74□□□□□ -1.33
SFXN3-207ENST00000489434 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
SFXN3-207ENST00000489434 SMCR5Q8TEV8 140 aa6.74□□□□□ -1.33
SFXN3-207ENST00000489434 KCNQ1DNQ9H478 68 aa6.74□□□□□ -1.33
SFXN3-207ENST00000489434 K7ERU9 68 aa6.73□□□□□ -1.33
SFXN3-207ENST00000489434 NCR3O14931 201 aa6.73□□□□□ -1.33
SFXN3-207ENST00000489434 SMIM13P0DJ93 91 aa6.73□□□□□ -1.33
SFXN3-207ENST00000489434 HSPB8Q9UJY1 196 aa6.73□□□□□ -1.33
SFXN3-207ENST00000489434 TMEM223A0PJW6 202 aa6.72□□□□□ -1.33
SFXN3-207ENST00000489434 SPRR1AP35321 89 aa6.72□□□□□ -1.33
SFXN3-207ENST00000489434 HERV-K104P63124 156 aa6.72□□□□□ -1.33
SFXN3-207ENST00000489434 GAGE2AQ6NT46 116 aa6.72□□□□□ -1.33
SFXN3-207ENST00000489434 SLC25A34Q6PIV7 304 aa6.72□□□□□ -1.33
SFXN3-207ENST00000489434 URB1-AS1Q96HZ7 61 aa6.72□□□□□ -1.33
SFXN3-207ENST00000489434 MAP1LC3CQ9BXW4 147 aa6.72□□□□□ -1.33
SFXN3-207ENST00000489434 BATFQ16520 125 aa6.71□□□□□ -1.34
SFXN3-207ENST00000489434 LINC00483Q53H64 154 aa6.71□□□□□ -1.34
SFXN3-207ENST00000489434 MIR7-3HGQ8N6C7 128 aa6.71□□□□□ -1.34
SFXN3-207ENST00000489434 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
SFXN3-207ENST00000489434 TRAV12-1A0A0B4J245 112 aa6.7□□□□□ -1.34
SFXN3-207ENST00000489434 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
SFXN3-207ENST00000489434 SYS1-DBNDD2H3BUS1 97 aa6.7□□□□□ -1.34
SFXN3-207ENST00000489434 SLC25A20O43772 301 aa6.7□□□□□ -1.34
SFXN3-207ENST00000489434 RPS29P62273 56 aaKnown RBP6.7□□□□□ -1.34
SFXN3-207ENST00000489434 MOBPQ13875 183 aa6.7□□□□□ -1.34
SFXN3-207ENST00000489434 MYMXA0A1B0GTQ4 84 aa6.69□□□□□ -1.34
SFXN3-207ENST00000489434 KRTAP4-16G5E9R7 235 aaPredicted RBP6.69□□□□□ -1.34
SFXN3-207ENST00000489434 GTF2H5Q6ZYL4 71 aa6.69□□□□□ -1.34
SFXN3-207ENST00000489434 SSBP3-AS1Q7Z2R9 100 aa6.69□□□□□ -1.34
SFXN3-207ENST00000489434 IFI27L1Q96BM0 104 aa6.69□□□□□ -1.34
SFXN3-207ENST00000489434 LEPROTL1O95214 131 aa6.68□□□□□ -1.34
SFXN3-207ENST00000489434 HINT1P49773 126 aaPredicted RBP6.68□□□□□ -1.34
SFXN3-207ENST00000489434 VAMP3Q15836 100 aa6.68□□□□□ -1.34
SFXN3-207ENST00000489434 OCIAD2Q56VL3 154 aa6.68□□□□□ -1.34
SFXN3-207ENST00000489434 BVES-AS1Q5T3Y7 98 aa6.68□□□□□ -1.34
SFXN3-207ENST00000489434 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
SFXN3-207ENST00000489434 B5MCH6 92 aa6.67□□□□□ -1.34
SFXN3-207ENST00000489434 TAX1BP3O14907 124 aa6.67□□□□□ -1.34
SFXN3-207ENST00000489434 COX8AP10176 69 aa6.67□□□□□ -1.34
SFXN3-207ENST00000489434 Q8N377 158 aa6.67□□□□□ -1.34
SFXN3-207ENST00000489434 A6NDN8 102 aa6.66□□□□□ -1.34
SFXN3-207ENST00000489434 SCGB1A1P11684 91 aa6.66□□□□□ -1.34
SFXN3-207ENST00000489434 TRBV10-2A0A0K0K1G8 114 aa6.65□□□□□ -1.34
SFXN3-207ENST00000489434 Q6ZRX8 168 aa6.65□□□□□ -1.34
SFXN3-207ENST00000489434 ERC2-IT1O76042 136 aa6.64□□□□□ -1.35
SFXN3-207ENST00000489434 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
SFXN3-207ENST00000489434 LCE2DQ5TA82 110 aaPredicted RBP6.64□□□□□ -1.35
SFXN3-207ENST00000489434 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
SFXN3-207ENST00000489434 C9orf118A6NHY6 69 aa6.63□□□□□ -1.35
SFXN3-207ENST00000489434 XP32Q5T750 250 aa6.63□□□□□ -1.35
SFXN3-207ENST00000489434 C9orf153Q5TBE3 101 aa6.63□□□□□ -1.35
SFXN3-207ENST00000489434 VPS25Q9BRG1 176 aa6.63□□□□□ -1.35
SFXN3-207ENST00000489434 Q9BRP9 147 aa6.63□□□□□ -1.35
SFXN3-207ENST00000489434 SPANXB1Q9NS25 103 aaPredicted RBP6.63□□□□□ -1.35
SFXN3-207ENST00000489434 LOC107984156A0A0G2JMH3 177 aa6.62□□□□□ -1.35
SFXN3-207ENST00000489434 ARL17AQ8IVW1 177 aa6.62□□□□□ -1.35
SFXN3-207ENST00000489434 HIGD1BQ9P298 99 aa6.62□□□□□ -1.35
SFXN3-207ENST00000489434 H0Y8G0 127 aa6.61□□□□□ -1.35
SFXN3-207ENST00000489434 HSD52Q0P140 79 aa6.61□□□□□ -1.35
SFXN3-207ENST00000489434 LEPROTO15243 131 aa6.6□□□□□ -1.35
SFXN3-207ENST00000489434 PLNP26678 52 aa6.6□□□□□ -1.35
SFXN3-207ENST00000489434 HERVK_113P61574 105 aa6.6□□□□□ -1.35
SFXN3-207ENST00000489434 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.35
SFXN3-207ENST00000489434 J3QQQ9 107 aa6.59□□□□□ -1.35
SFXN3-207ENST00000489434 J3QR89 54 aa6.59□□□□□ -1.35
SFXN3-207ENST00000489434 NDUFC2O95298 119 aa6.59□□□□□ -1.35
SFXN3-207ENST00000489434 IGLV6-57P01721 117 aa6.59□□□□□ -1.35
SFXN3-207ENST00000489434 NMUP48645 174 aa6.59□□□□□ -1.35
SFXN3-207ENST00000489434 K7EP34 96 aa6.58□□□□□ -1.36
SFXN3-207ENST00000489434 LGALS3P17931 250 aaKnown RBP6.58□□□□□ -1.36
SFXN3-207ENST00000489434 TSPEAR-AS2P59090 65 aa6.58□□□□□ -1.36
SFXN3-207ENST00000489434 TAL2Q16559 108 aa6.58□□□□□ -1.36
SFXN3-207ENST00000489434 ATOH7Q8N100 152 aa6.58□□□□□ -1.36
SFXN3-207ENST00000489434 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
SFXN3-207ENST00000489434 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
SFXN3-207ENST00000489434 FSIP2Q5CZC0 6907 aa6.58□□□□□ -1.36
SFXN3-207ENST00000489434 ZNF73O43830 326 aaPredicted RBP6.57□□□□□ -1.36
SFXN3-207ENST00000489434 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
SFXN3-207ENST00000489434 C2orf91Q6ZV80 131 aa6.57□□□□□ -1.36
SFXN3-207ENST00000489434 MTURNQ8N3F0 131 aa6.57□□□□□ -1.36
SFXN3-207ENST00000489434 DPM2O94777 84 aa6.56□□□□□ -1.36
SFXN3-207ENST00000489434 F8W1H4 67 aa6.55□□□□□ -1.36
SFXN3-207ENST00000489434 FABP2P12104 132 aa6.55□□□□□ -1.36
SFXN3-207ENST00000489434 A0A1W2PPM0 123 aa6.54□□□□□ -1.36
SFXN3-207ENST00000489434 CFC1BP0CG36 223 aa6.54□□□□□ -1.36
SFXN3-207ENST00000489434 ST20-AS1Q8NBB2 130 aa6.54□□□□□ -1.36
SFXN3-207ENST00000489434 IGLV8-61A0A075B6I0 122 aa6.53□□□□□ -1.36
SFXN3-207ENST00000489434 PCOTHQ58A44 107 aa6.53□□□□□ -1.36
SFXN3-207ENST00000489434 IGKCP01834 107 aa6.52□□□□□ -1.37
SFXN3-207ENST00000489434 NPC2P61916 151 aa6.52□□□□□ -1.37
SFXN3-207ENST00000489434 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
SFXN3-207ENST00000489434 DHRS4-AS1Q9P1J3 65 aa6.52□□□□□ -1.37
SFXN3-207ENST00000489434 LAMTOR3Q9UHA4 124 aa6.52□□□□□ -1.37
SFXN3-207ENST00000489434 C9orf92A6NGG3 77 aa6.51□□□□□ -1.37
SFXN3-207ENST00000489434 HRCT1Q6UXD1 115 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms