RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SFTA2Q6UW10 78 aa5.14□□□□□ -1.59
TRAPPC12-221ENST00000489032 COPS9Q8WXC6 57 aa5.14□□□□□ -1.59
TRAPPC12-221ENST00000489032 NHP2Q9NX24 153 aaKnown RBP5.14□□□□□ -1.59
TRAPPC12-221ENST00000489032 A0A0J9YXY3 114 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 NDUFA1O15239 70 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 CKS1BP61024 79 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 HERV-K104P63124 156 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 LINC01620Q4KN68 170 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 C6orf226Q5I0X4 101 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 LINC00526Q96FQ7 95 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 DPH3Q96FX2 82 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 TOMM7Q9P0U1 55 aa5.13□□□□□ -1.59
TRAPPC12-221ENST00000489032 A0A1B0GWB2 263 aa5.12□□□□□ -1.59
TRAPPC12-221ENST00000489032 FABP2P12104 132 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 IFITM1P13164 125 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 CXCL5P42830 114 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 Q6ZRU5 148 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 GTF2H5Q6ZYL4 71 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 Q8IZM0 81 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 COX7B2Q8TF08 81 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 RAB37Q96AX2 223 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 SPANXDQ9BXN6 97 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 SPANXCQ9NY87 97 aa5.11□□□□□ -1.59
TRAPPC12-221ENST00000489032 LOC107984640A0A0U1RRK4 108 aa5.1□□□□□ -1.59
TRAPPC12-221ENST00000489032 H3BUT2 72 aa5.1□□□□□ -1.59
TRAPPC12-221ENST00000489032 SDIM1Q6ZPB5 146 aa5.1□□□□□ -1.59
TRAPPC12-221ENST00000489032 Q6ZSA8 131 aa5.1□□□□□ -1.59
TRAPPC12-221ENST00000489032 LINC00474Q9P2X8 69 aa5.1□□□□□ -1.59
TRAPPC12-221ENST00000489032 IGKV2-24A0A0C4DH68 120 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 TRBV30A0A0K0K1B3 111 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 A0A1W2PPM0 123 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 RPL18AQ02543 176 aaKnown RBP5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 KIAA0087Q14695 138 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 MEIG1Q5JSS6 88 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 LYRM7Q5U5X0 104 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 MUSTN1Q8IVN3 82 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 ZNF625Q96I27 306 aaPredicted RBP5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 PPDPFQ9H3Y8 114 aa5.09□□□□□ -1.59
TRAPPC12-221ENST00000489032 A0A0B4J2C4 111 aa5.08□□□□□ -1.6
TRAPPC12-221ENST00000489032 K7ERJ3 54 aa5.08□□□□□ -1.6
TRAPPC12-221ENST00000489032 UNQ6190/PRO20217Q6UXQ8 127 aa5.08□□□□□ -1.6
TRAPPC12-221ENST00000489032 PRO1854Q9UHT4 67 aa5.08□□□□□ -1.6
TRAPPC12-221ENST00000489032 RPL37AP8A6NKH3 93 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 K7EP34 96 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 HAMPP81172 84 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 C2orf82Q6UX34 121 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 SCXQ7RTU7 201 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 SPACA4Q8TDM5 124 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 C6orf48Q9UBA6 75 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 SPCS1Q9Y6A9 102 aa5.07□□□□□ -1.6
TRAPPC12-221ENST00000489032 A0A096LNI7 61 aa5.06□□□□□ -1.6
TRAPPC12-221ENST00000489032 NDUFC2-KCTD14E9PQ53 114 aa5.06□□□□□ -1.6
TRAPPC12-221ENST00000489032 OXTP01178 125 aa5.06□□□□□ -1.6
TRAPPC12-221ENST00000489032 TLX1NBP0CAT3 122 aa5.06□□□□□ -1.6
TRAPPC12-221ENST00000489032 CHTF8P0CG12 524 aa5.06□□□□□ -1.6
TRAPPC12-221ENST00000489032 CIRBP-AS1Q8TBR5 109 aa5.06□□□□□ -1.6
TRAPPC12-221ENST00000489032 ERG28Q9UKR5 140 aa5.06□□□□□ -1.6
TRAPPC12-221ENST00000489032 LINC00308Q8TCZ7 52 aa5.05□□□□□ -1.6
TRAPPC12-221ENST00000489032 PANO1I0J062 215 aa5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 TSPAN13O95857 204 aa5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 LINC00158P58513 81 aa5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 COX17Q14061 63 aa5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 Q1RN00 199 aa5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 C7orf33Q8WU49 177 aa5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 NAA38Q9BRA0 125 aaKnown RBP5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 PLAC8Q9NZF1 115 aa5.04□□□□□ -1.6
TRAPPC12-221ENST00000489032 DNAH8Q96JB1 4490 aa5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 TRBV20-1A0A075B6N2 111 aa5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 LOC107984156A0A0G2JMH3 177 aa5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 COX6CP09669 75 aa5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 SCGB1C2P0DMR2 95 aa5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 PSMB2P49721 201 aa5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 C9orf116Q5BN46 136 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 ARL17AQ8IVW1 177 aa5.03□□□□□ -1.6
TRAPPC12-221ENST00000489032 A0A0U1RRA0 63 aa5.02□□□□□ -1.61
TRAPPC12-221ENST00000489032 NPC2P61916 151 aa5.02□□□□□ -1.61
TRAPPC12-221ENST00000489032 REG3GQ6UW15 175 aa5.02□□□□□ -1.61
TRAPPC12-221ENST00000489032 DAND5Q8N907 189 aa5.02□□□□□ -1.61
TRAPPC12-221ENST00000489032 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
TRAPPC12-221ENST00000489032 F8W1H4 67 aa5.01□□□□□ -1.61
TRAPPC12-221ENST00000489032 PFN2P35080 140 aa5.01□□□□□ -1.61
TRAPPC12-221ENST00000489032 MIR7-3HGQ8N6C7 128 aa5.01□□□□□ -1.61
TRAPPC12-221ENST00000489032 LRP1Q07954 4544 aaKnown RBP5□□□□□ -1.61
TRAPPC12-221ENST00000489032 H7C2G1 150 aa5□□□□□ -1.61
TRAPPC12-221ENST00000489032 RPL13AP40429 203 aaKnown RBP5□□□□□ -1.61
TRAPPC12-221ENST00000489032 DSCR10P59022 87 aa5□□□□□ -1.61
TRAPPC12-221ENST00000489032 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
TRAPPC12-221ENST00000489032 FAM19A5Q7Z5A7 132 aaPredicted RBP5□□□□□ -1.61
TRAPPC12-221ENST00000489032 SND1-IT1Q9HBX3 110 aa5□□□□□ -1.61
TRAPPC12-221ENST00000489032 XAGE1AQ9HD64 81 aa5□□□□□ -1.61
TRAPPC12-221ENST00000489032 A0A1W2PNN7 141 aa4.99□□□□□ -1.61
TRAPPC12-221ENST00000489032 LRP2P98164 4655 aa4.99□□□□□ -1.61
TRAPPC12-221ENST00000489032 H3BMG7 143 aa4.98□□□□□ -1.61
TRAPPC12-221ENST00000489032 M0QXV9 152 aa4.98□□□□□ -1.61
TRAPPC12-221ENST00000489032 UBE2BP63146 152 aa4.98□□□□□ -1.61
TRAPPC12-221ENST00000489032 ATXN8Q156A1 80 aa4.98□□□□□ -1.61
TRAPPC12-221ENST00000489032 C9orf129Q5T035 196 aaKnown RBP4.98□□□□□ -1.61
TRAPPC12-221ENST00000489032 SOSTDC1Q6X4U4 206 aa4.98□□□□□ -1.61
TRAPPC12-221ENST00000489032 FAM168BA1KXE4 195 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms