RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 VPREB1P12018 145 aa12.98□□□□□ -0.33
HMG20B-213ENST00000488973 M0R378 163 aa12.95□□□□□ -0.34
HMG20B-213ENST00000488973 TMEM254Q8TBM7 123 aa12.95□□□□□ -0.34
HMG20B-213ENST00000488973 CAMK2N2Q96S95 79 aa12.94□□□□□ -0.34
HMG20B-213ENST00000488973 TM2D3Q9BRN9 247 aa12.94□□□□□ -0.34
HMG20B-213ENST00000488973 VWFP04275 2813 aa12.94□□□□□ -0.34
HMG20B-213ENST00000488973 EGFEM1PQ0D2K5 195 aa12.93□□□□□ -0.34
HMG20B-213ENST00000488973 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
HMG20B-213ENST00000488973 SCXQ7RTU7 201 aa12.92□□□□□ -0.34
HMG20B-213ENST00000488973 NSD1Q96L73 2696 aaPredicted RBP12.91□□□□□ -0.34
HMG20B-213ENST00000488973 Q1T7F1 81 aa12.91□□□□□ -0.34
HMG20B-213ENST00000488973 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
HMG20B-213ENST00000488973 HIGD2BQ4VC39 106 aa12.9□□□□□ -0.34
HMG20B-213ENST00000488973 Q6ZTC4 211 aa12.9□□□□□ -0.34
HMG20B-213ENST00000488973 HIVEP1P15822 2718 aa12.9□□□□□ -0.35
HMG20B-213ENST00000488973 NREPQ16612 68 aa12.89□□□□□ -0.35
HMG20B-213ENST00000488973 FUSP35637 526 aaKnown RBP eCLIP12.89□□□□□ -0.35
HMG20B-213ENST00000488973 KRTAP26-1Q6PEX3 210 aa12.89□□□□□ -0.35
HMG20B-213ENST00000488973 PRYO14603 147 aa12.87□□□□□ -0.35
HMG20B-213ENST00000488973 BPY2O14599 106 aa12.86□□□□□ -0.35
HMG20B-213ENST00000488973 WFDC10BQ8IUB3 73 aa12.85□□□□□ -0.35
HMG20B-213ENST00000488973 C15orf56Q8N910 161 aa12.84□□□□□ -0.35
HMG20B-213ENST00000488973 H3BNG1 76 aa12.83□□□□□ -0.36
HMG20B-213ENST00000488973 hDV103S1A0JD37 113 aa12.81□□□□□ -0.36
HMG20B-213ENST00000488973 IGKV4-1P06312 121 aa12.81□□□□□ -0.36
HMG20B-213ENST00000488973 KPRPQ5T749 579 aaPredicted RBP12.8□□□□□ -0.36
HMG20B-213ENST00000488973 Q6ZRP5 223 aa12.79□□□□□ -0.36
HMG20B-213ENST00000488973 Q8N9L7 120 aa12.78□□□□□ -0.36
HMG20B-213ENST00000488973 KCNQ1DNQ9H478 68 aa12.77□□□□□ -0.37
HMG20B-213ENST00000488973 C4orf48Q5BLP8 95 aa12.77□□□□□ -0.37
HMG20B-213ENST00000488973 KTN1-AS1Q86SY8 53 aa12.76□□□□□ -0.37
HMG20B-213ENST00000488973 OCR1Q9BZK8 76 aa12.76□□□□□ -0.37
HMG20B-213ENST00000488973 RBM12B-AS1Q9P1G2 102 aa12.76□□□□□ -0.37
HMG20B-213ENST00000488973 IGLV5-48A0A075B6I7 105 aa12.74□□□□□ -0.37
HMG20B-213ENST00000488973 Q8N377 158 aa12.73□□□□□ -0.37
HMG20B-213ENST00000488973 SYCNQ0VAF6 134 aa12.72□□□□□ -0.37
HMG20B-213ENST00000488973 NKAPP1Q8N9T2 125 aa12.72□□□□□ -0.37
HMG20B-213ENST00000488973 A0A1B0GW54 56 aa12.72□□□□□ -0.37
HMG20B-213ENST00000488973 C3orf84H3BNL1 204 aa12.72□□□□□ -0.37
HMG20B-213ENST00000488973 TENM1Q9UKZ4 2725 aa12.71□□□□□ -0.37
HMG20B-213ENST00000488973 DEFB105AQ8NG35 78 aa12.7□□□□□ -0.38
HMG20B-213ENST00000488973 C7orf33Q8WU49 177 aa12.7□□□□□ -0.38
HMG20B-213ENST00000488973 IGKV2D-24A0A075B6R9 120 aa12.69□□□□□ -0.38
HMG20B-213ENST00000488973 LINC01556Q5JQF7 62 aa12.69□□□□□ -0.38
HMG20B-213ENST00000488973 F8P00451 2351 aa12.68□□□□□ -0.38
HMG20B-213ENST00000488973 SERTAD4-AS1Q5TG53 156 aa12.68□□□□□ -0.38
HMG20B-213ENST00000488973 TRAV22A0A0B4J277 110 aa12.68□□□□□ -0.38
HMG20B-213ENST00000488973 DHRS4-AS1Q9P1J3 65 aa12.68□□□□□ -0.38
HMG20B-213ENST00000488973 UBE2BP63146 152 aa12.67□□□□□ -0.38
HMG20B-213ENST00000488973 LINC00588Q9Y4M8 146 aa12.67□□□□□ -0.38
HMG20B-213ENST00000488973 PLA2G2DQ9UNK4 145 aa12.66□□□□□ -0.38
HMG20B-213ENST00000488973 KRTAP24-1Q3LI83 254 aa12.66□□□□□ -0.38
HMG20B-213ENST00000488973 FLNBO75369 2602 aaKnown RBP12.65□□□□□ -0.38
HMG20B-213ENST00000488973 PSPHP1O15172 72 aa12.65□□□□□ -0.38
HMG20B-213ENST00000488973 Q6ZRX8 168 aa12.64□□□□□ -0.39
HMG20B-213ENST00000488973 C1orf64Q8NEQ6 169 aa12.64□□□□□ -0.39
HMG20B-213ENST00000488973 TLX1NBP0CAT3 122 aa12.64□□□□□ -0.39
HMG20B-213ENST00000488973 HIGD2AQ9BW72 106 aa12.63□□□□□ -0.39
HMG20B-213ENST00000488973 TRRAPQ9Y4A5 3859 aa12.62□□□□□ -0.39
HMG20B-213ENST00000488973 A0A1W2PNM2 257 aa12.62□□□□□ -0.39
HMG20B-213ENST00000488973 KRTAP4-16G5E9R7 235 aaPredicted RBP12.62□□□□□ -0.39
HMG20B-213ENST00000488973 TNP2Q05952 138 aa12.62□□□□□ -0.39
HMG20B-213ENST00000488973 TEP1Q99973 2627 aaKnown RBP12.62□□□□□ -0.39
HMG20B-213ENST00000488973 NDUFS5O43920 106 aa12.61□□□□□ -0.39
HMG20B-213ENST00000488973 ATRQ13535 2644 aa12.61□□□□□ -0.39
HMG20B-213ENST00000488973 Q9BRP9 147 aa12.6□□□□□ -0.39
HMG20B-213ENST00000488973 LRCOL1A6NCL2 159 aa12.6□□□□□ -0.39
HMG20B-213ENST00000488973 SPRR1AP35321 89 aa12.6□□□□□ -0.39
HMG20B-213ENST00000488973 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
HMG20B-213ENST00000488973 C1orf137Q5JT78 98 aa12.59□□□□□ -0.39
HMG20B-213ENST00000488973 IGLV1-50A0A075B6I6 118 aa12.58□□□□□ -0.4
HMG20B-213ENST00000488973 SMIM29Q86T20 159 aa12.58□□□□□ -0.4
HMG20B-213ENST00000488973 Q8NBF4 154 aa12.58□□□□□ -0.4
HMG20B-213ENST00000488973 LCE6AA0A183 80 aa12.57□□□□□ -0.4
HMG20B-213ENST00000488973 ETDCA0A1B0GVM5 59 aa12.57□□□□□ -0.4
HMG20B-213ENST00000488973 PKD1L1Q8TDX9 2849 aa12.57□□□□□ -0.4
HMG20B-213ENST00000488973 RPL37AP8A6NKH3 93 aa12.57□□□□□ -0.4
HMG20B-213ENST00000488973 SPRR4Q96PI1 79 aa12.57□□□□□ -0.4
HMG20B-213ENST00000488973 DNAH10OSP0CZ25 163 aa12.56□□□□□ -0.4
HMG20B-213ENST00000488973 CYP4F30PQ9H0H9 118 aa12.55□□□□□ -0.4
HMG20B-213ENST00000488973 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
HMG20B-213ENST00000488973 PHF5AQ7RTV0 110 aaKnown RBP12.54□□□□□ -0.4
HMG20B-213ENST00000488973 FAM30AQ9NZY2 134 aa12.54□□□□□ -0.4
HMG20B-213ENST00000488973 UBE2AP49459 152 aa12.54□□□□□ -0.4
HMG20B-213ENST00000488973 PSCAO43653 123 aa12.53□□□□□ -0.4
HMG20B-213ENST00000488973 ST20-AS1Q8NBB2 130 aa12.53□□□□□ -0.4
HMG20B-213ENST00000488973 C11orf45Q8TAV5 145 aa12.53□□□□□ -0.4
HMG20B-213ENST00000488973 FAM168BA1KXE4 195 aa12.52□□□□□ -0.4
HMG20B-213ENST00000488973 A8MUN3 132 aa12.52□□□□□ -0.4
HMG20B-213ENST00000488973 OXLD1Q5BKU9 147 aa12.52□□□□□ -0.41
HMG20B-213ENST00000488973 Q5VV11 94 aa12.51□□□□□ -0.41
HMG20B-213ENST00000488973 KRTAP10-11P60412 298 aa12.51□□□□□ -0.41
HMG20B-213ENST00000488973 DSCR10P59022 87 aa12.5□□□□□ -0.41
HMG20B-213ENST00000488973 ATP11AUNQ6ZP68 121 aa12.5□□□□□ -0.41
HMG20B-213ENST00000488973 KRTAP7-1Q8IUC3 87 aa12.49□□□□□ -0.41
HMG20B-213ENST00000488973 A8MU10 97 aa12.48□□□□□ -0.41
HMG20B-213ENST00000488973 ZCCHC13Q8WW36 166 aaKnown RBP12.48□□□□□ -0.41
HMG20B-213ENST00000488973 C16orf90A8MZG2 172 aa12.47□□□□□ -0.41
HMG20B-213ENST00000488973 K7EQZ3 153 aa12.45□□□□□ -0.42
HMG20B-213ENST00000488973 FBN1P35555 2871 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms