RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 ADAMTSL4-AS1Q5T5F5 129 aa10.27□□□□□ -0.77
ATG9A-222ENST00000488833 Q8N377 158 aa10.27□□□□□ -0.77
ATG9A-222ENST00000488833 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
ATG9A-222ENST00000488833 EIF4EBP3O60516 100 aaPredicted RBP10.26□□□□□ -0.77
ATG9A-222ENST00000488833 C9orf153Q5TBE3 101 aa10.26□□□□□ -0.77
ATG9A-222ENST00000488833 E9PLD3 99 aa10.25□□□□□ -0.77
ATG9A-222ENST00000488833 ASB16-AS1Q495Z4 193 aa10.25□□□□□ -0.77
ATG9A-222ENST00000488833 COLCA2A8K830 154 aa10.24□□□□□ -0.77
ATG9A-222ENST00000488833 SLC25A20O43772 301 aa10.24□□□□□ -0.77
ATG9A-222ENST00000488833 ST20-AS1Q8NBB2 130 aa10.23□□□□□ -0.77
ATG9A-222ENST00000488833 SEC61BP60468 96 aaKnown RBP10.21□□□□□ -0.77
ATG9A-222ENST00000488833 SLC7A5P1Q8MH63 180 aa10.21□□□□□ -0.77
ATG9A-222ENST00000488833 CBY1Q9Y3M2 126 aa10.21□□□□□ -0.77
ATG9A-222ENST00000488833 HINT1P49773 126 aaPredicted RBP10.2□□□□□ -0.78
ATG9A-222ENST00000488833 SYS1-DBNDD2H3BUS1 97 aa10.19□□□□□ -0.78
ATG9A-222ENST00000488833 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
ATG9A-222ENST00000488833 LINC00308Q8TCZ7 52 aa10.19□□□□□ -0.78
ATG9A-222ENST00000488833 SPANXCQ9NY87 97 aa10.19□□□□□ -0.78
ATG9A-222ENST00000488833 LITAFQ99732 161 aa10.18□□□□□ -0.78
ATG9A-222ENST00000488833 C5orf52A6NGY3 159 aa10.17□□□□□ -0.78
ATG9A-222ENST00000488833 KRTAP4-1Q9BYQ7 146 aa10.17□□□□□ -0.78
ATG9A-222ENST00000488833 TIMM17BO60830 172 aa10.16□□□□□ -0.78
ATG9A-222ENST00000488833 ZNF815PA8K554 130 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BKO60814 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BJP06899 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BOP23527 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BBP33778 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BDP58876 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BCP62807 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST2H2BEQ16778 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.14□□□□□ -0.79
ATG9A-222ENST00000488833 LINC01545Q5VT33 79 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BHQ93079 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BNQ99877 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 HIST1H2BMQ99879 126 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 DHRS4-AS1Q9P1J3 65 aa10.14□□□□□ -0.79
ATG9A-222ENST00000488833 LINC01547P58512 204 aaPredicted RBP10.13□□□□□ -0.79
ATG9A-222ENST00000488833 XP32Q5T750 250 aa10.13□□□□□ -0.79
ATG9A-222ENST00000488833 SPANXDQ9BXN6 97 aa10.13□□□□□ -0.79
ATG9A-222ENST00000488833 SPRR1BP22528 89 aa10.12□□□□□ -0.79
ATG9A-222ENST00000488833 SLC25A34Q6PIV7 304 aa10.12□□□□□ -0.79
ATG9A-222ENST00000488833 PET117Q6UWS5 81 aa10.12□□□□□ -0.79
ATG9A-222ENST00000488833 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
ATG9A-222ENST00000488833 HRCT1Q6UXD1 115 aa10.11□□□□□ -0.79
ATG9A-222ENST00000488833 COX7BP24311 80 aa10.1□□□□□ -0.79
ATG9A-222ENST00000488833 LIMD2Q9BT23 127 aa10.1□□□□□ -0.79
ATG9A-222ENST00000488833 ELOF1P60002 83 aaKnown RBP10.09□□□□□ -0.79
ATG9A-222ENST00000488833 LAMTOR3Q9UHA4 124 aa10.09□□□□□ -0.79
ATG9A-222ENST00000488833 LINC00518Q8N0U6 118 aa10.08□□□□□ -0.8
ATG9A-222ENST00000488833 C6orf99Q4VX62 202 aa10.07□□□□□ -0.8
ATG9A-222ENST00000488833 C3orf79P0CE67 100 aa10.06□□□□□ -0.8
ATG9A-222ENST00000488833 KRTAP9-6A0A140TA67 174 aa10.04□□□□□ -0.8
ATG9A-222ENST00000488833 KRTDAPP60985 99 aa10.04□□□□□ -0.8
ATG9A-222ENST00000488833 TAL2Q16559 108 aa10.04□□□□□ -0.8
ATG9A-222ENST00000488833 Q1RN00 199 aa10.04□□□□□ -0.8
ATG9A-222ENST00000488833 SCGB1D4Q6XE38 83 aa10.04□□□□□ -0.8
ATG9A-222ENST00000488833 DEFB105AQ8NG35 78 aa10.04□□□□□ -0.8
ATG9A-222ENST00000488833 C9orf92A6NGG3 77 aa10.01□□□□□ -0.81
ATG9A-222ENST00000488833 TEX49A0A1B0GTD5 131 aa10□□□□□ -0.81
ATG9A-222ENST00000488833 COPS9Q8WXC6 57 aa10□□□□□ -0.81
ATG9A-222ENST00000488833 PRO1933Q9H354 126 aa10□□□□□ -0.81
ATG9A-222ENST00000488833 TRBV7-6A0A0J9YX20 115 aa9.99□□□□□ -0.81
ATG9A-222ENST00000488833 C20orf202A1L168 122 aa9.99□□□□□ -0.81
ATG9A-222ENST00000488833 A0A1B0GWB2 263 aa9.98□□□□□ -0.81
ATG9A-222ENST00000488833 CD164Q04900 197 aa9.98□□□□□ -0.81
ATG9A-222ENST00000488833 ANKRD39Q53RE8 183 aa9.98□□□□□ -0.81
ATG9A-222ENST00000488833 A6NDN8 102 aa9.97□□□□□ -0.81
ATG9A-222ENST00000488833 H7C2G1 150 aa9.97□□□□□ -0.81
ATG9A-222ENST00000488833 IFITM1P13164 125 aa9.97□□□□□ -0.81
ATG9A-222ENST00000488833 PCOTHQ58A44 107 aa9.97□□□□□ -0.81
ATG9A-222ENST00000488833 COA6Q5JTJ3 125 aaKnown RBP9.97□□□□□ -0.81
ATG9A-222ENST00000488833 ATOH7Q8N100 152 aa9.96□□□□□ -0.82
ATG9A-222ENST00000488833 SMIM29Q86T20 159 aa9.95□□□□□ -0.82
ATG9A-222ENST00000488833 IGLV8-61A0A075B6I0 122 aa9.94□□□□□ -0.82
ATG9A-222ENST00000488833 AKR1D1P51857 326 aa9.94□□□□□ -0.82
ATG9A-222ENST00000488833 Q6ZVH6 145 aa9.94□□□□□ -0.82
ATG9A-222ENST00000488833 MUSTN1Q8IVN3 82 aa9.94□□□□□ -0.82
ATG9A-222ENST00000488833 IGLV5-48A0A075B6I7 105 aa9.93□□□□□ -0.82
ATG9A-222ENST00000488833 LCE2CQ5TA81 110 aa9.93□□□□□ -0.82
ATG9A-222ENST00000488833 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
ATG9A-222ENST00000488833 A0A0G2JQZ4 141 aa9.91□□□□□ -0.82
ATG9A-222ENST00000488833 Q5XG85 94 aa9.91□□□□□ -0.82
ATG9A-222ENST00000488833 TRAV13-2A0A0B4J235 113 aa9.89□□□□□ -0.83
ATG9A-222ENST00000488833 A4D1N5 150 aa9.89□□□□□ -0.83
ATG9A-222ENST00000488833 KRTAP19-2Q3LHN2 52 aa9.89□□□□□ -0.83
ATG9A-222ENST00000488833 C1orf195Q5TG92 126 aa9.89□□□□□ -0.83
ATG9A-222ENST00000488833 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
ATG9A-222ENST00000488833 LCE2DQ5TA82 110 aaPredicted RBP9.88□□□□□ -0.83
ATG9A-222ENST00000488833 SMIM11BQ8TCY0 68 aa9.88□□□□□ -0.83
ATG9A-222ENST00000488833 MT1HP80294 61 aa9.83□□□□□ -0.84
ATG9A-222ENST00000488833 F8WEM9 126 aa9.82□□□□□ -0.84
ATG9A-222ENST00000488833 SNRPEP62304 92 aaKnown RBP9.82□□□□□ -0.84
ATG9A-222ENST00000488833 TCL1BO95988 128 aa9.81□□□□□ -0.84
ATG9A-222ENST00000488833 RPL37P61927 97 aaKnown RBP9.8□□□□□ -0.84
ATG9A-222ENST00000488833 VAMP3Q15836 100 aa9.8□□□□□ -0.84
ATG9A-222ENST00000488833 CFC1BP0CG36 223 aa9.78□□□□□ -0.84
ATG9A-222ENST00000488833 LINC00575Q6W349 94 aa9.78□□□□□ -0.84
ATG9A-222ENST00000488833 Q6ZQY7 126 aa9.76□□□□□ -0.85
ATG9A-222ENST00000488833 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
ATG9A-222ENST00000488833 hADV29S1A0JD25 119 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms