RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 Q9BRP9 147 aa9.28□□□□□ -0.92
CTDSP1-209ENST00000488627 SPANXCQ9NY87 97 aa9.28□□□□□ -0.92
CTDSP1-209ENST00000488627 LPAP08519 4548 aa9.27□□□□□ -0.92
CTDSP1-209ENST00000488627 PCP2Q8IVA1 136 aa9.27□□□□□ -0.93
CTDSP1-209ENST00000488627 TRAV23DV6A0A075B6W5 121 aa9.26□□□□□ -0.93
CTDSP1-209ENST00000488627 AKR1D1P51857 326 aa9.26□□□□□ -0.93
CTDSP1-209ENST00000488627 Q6ZRX8 168 aa9.26□□□□□ -0.93
CTDSP1-209ENST00000488627 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
CTDSP1-209ENST00000488627 ZNF73O43830 326 aaPredicted RBP9.25□□□□□ -0.93
CTDSP1-209ENST00000488627 S100A2P29034 98 aa9.25□□□□□ -0.93
CTDSP1-209ENST00000488627 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
CTDSP1-209ENST00000488627 SPANXDQ9BXN6 97 aa9.25□□□□□ -0.93
CTDSP1-209ENST00000488627 LINC00483Q53H64 154 aa9.24□□□□□ -0.93
CTDSP1-209ENST00000488627 SCGB1D4Q6XE38 83 aa9.24□□□□□ -0.93
CTDSP1-209ENST00000488627 SNRPEP62304 92 aaKnown RBP9.23□□□□□ -0.93
CTDSP1-209ENST00000488627 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
CTDSP1-209ENST00000488627 S100A6P06703 90 aa9.22□□□□□ -0.93
CTDSP1-209ENST00000488627 PRR4Q16378 134 aa9.22□□□□□ -0.93
CTDSP1-209ENST00000488627 GAGE2AQ6NT46 116 aa9.21□□□□□ -0.94
CTDSP1-209ENST00000488627 LINC00518Q8N0U6 118 aa9.21□□□□□ -0.94
CTDSP1-209ENST00000488627 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
CTDSP1-209ENST00000488627 C5orf52A6NGY3 159 aa9.2□□□□□ -0.94
CTDSP1-209ENST00000488627 IFITM1P13164 125 aa9.2□□□□□ -0.94
CTDSP1-209ENST00000488627 CTAG1AP78358 180 aa9.2□□□□□ -0.94
CTDSP1-209ENST00000488627 Q6ZVH6 145 aa9.2□□□□□ -0.94
CTDSP1-209ENST00000488627 CBY1Q9Y3M2 126 aa9.2□□□□□ -0.94
CTDSP1-209ENST00000488627 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
CTDSP1-209ENST00000488627 MUSTN1Q8IVN3 82 aa9.18□□□□□ -0.94
CTDSP1-209ENST00000488627 HINT1P49773 126 aaPredicted RBP9.16□□□□□ -0.94
CTDSP1-209ENST00000488627 SPAG11AQ6PDA7 123 aa9.16□□□□□ -0.94
CTDSP1-209ENST00000488627 ST20-AS1Q8NBB2 130 aa9.16□□□□□ -0.94
CTDSP1-209ENST00000488627 Q8NBF4 154 aa9.15□□□□□ -0.94
CTDSP1-209ENST00000488627 COPS9Q8WXC6 57 aa9.15□□□□□ -0.94
CTDSP1-209ENST00000488627 RETNLBQ9BQ08 111 aa9.15□□□□□ -0.94
CTDSP1-209ENST00000488627 RNF213Q63HN8 5207 aa9.14□□□□□ -0.95
CTDSP1-209ENST00000488627 HSBP1L1C9JCN9 74 aa9.14□□□□□ -0.95
CTDSP1-209ENST00000488627 C6orf99Q4VX62 202 aa9.14□□□□□ -0.95
CTDSP1-209ENST00000488627 ELOF1P60002 83 aaKnown RBP9.13□□□□□ -0.95
CTDSP1-209ENST00000488627 SCGB1D1O95968 90 aa9.12□□□□□ -0.95
CTDSP1-209ENST00000488627 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
CTDSP1-209ENST00000488627 IGLV9-49A0A0B4J1Y8 123 aa9.11□□□□□ -0.95
CTDSP1-209ENST00000488627 COX7BP24311 80 aa9.11□□□□□ -0.95
CTDSP1-209ENST00000488627 MOBPQ13875 183 aa9.11□□□□□ -0.95
CTDSP1-209ENST00000488627 DHRS4-AS1Q9P1J3 65 aa9.11□□□□□ -0.95
CTDSP1-209ENST00000488627 TRBV7-6A0A0J9YX20 115 aa9.1□□□□□ -0.95
CTDSP1-209ENST00000488627 SPRR1BP22528 89 aa9.1□□□□□ -0.95
CTDSP1-209ENST00000488627 C4orf48Q5BLP8 95 aa9.1□□□□□ -0.95
CTDSP1-209ENST00000488627 A6NDN8 102 aa9.09□□□□□ -0.95
CTDSP1-209ENST00000488627 SPINK1P00995 79 aa9.08□□□□□ -0.96
CTDSP1-209ENST00000488627 TRAV13-2A0A0B4J235 113 aa9.07□□□□□ -0.96
CTDSP1-209ENST00000488627 IGLV7-46A0A075B6I9 117 aa9.06□□□□□ -0.96
CTDSP1-209ENST00000488627 COX8AP10176 69 aa9.06□□□□□ -0.96
CTDSP1-209ENST00000488627 SMIM11BQ8TCY0 68 aa9.06□□□□□ -0.96
CTDSP1-209ENST00000488627 A0A1B0GWB2 263 aa9.05□□□□□ -0.96
CTDSP1-209ENST00000488627 A4D1N5 150 aa9.05□□□□□ -0.96
CTDSP1-209ENST00000488627 DLEU1O43261 78 aa9.04□□□□□ -0.96
CTDSP1-209ENST00000488627 RPS29P62273 56 aaKnown RBP9.03□□□□□ -0.96
CTDSP1-209ENST00000488627 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
CTDSP1-209ENST00000488627 C9orf153Q5TBE3 101 aa9.02□□□□□ -0.97
CTDSP1-209ENST00000488627 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
CTDSP1-209ENST00000488627 FP248Q71RG6 208 aaPredicted RBP9.01□□□□□ -0.97
CTDSP1-209ENST00000488627 Q8N377 158 aa9.01□□□□□ -0.97
CTDSP1-209ENST00000488627 TAL2Q16559 108 aa9□□□□□ -0.97
CTDSP1-209ENST00000488627 SLC25A34Q6PIV7 304 aa9□□□□□ -0.97
CTDSP1-209ENST00000488627 C14orf144Q96I85 54 aa9□□□□□ -0.97
CTDSP1-209ENST00000488627 IGLV5-48A0A075B6I7 105 aa8.99□□□□□ -0.97
CTDSP1-209ENST00000488627 TEX49A0A1B0GTD5 131 aa8.99□□□□□ -0.97
CTDSP1-209ENST00000488627 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
CTDSP1-209ENST00000488627 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
CTDSP1-209ENST00000488627 HIST1H4GQ99525 98 aa8.99□□□□□ -0.97
CTDSP1-209ENST00000488627 LAMTOR3Q9UHA4 124 aa8.99□□□□□ -0.97
CTDSP1-209ENST00000488627 PAM16Q9Y3D7 125 aa8.99□□□□□ -0.97
CTDSP1-209ENST00000488627 SPATA45Q537H7 98 aa8.98□□□□□ -0.97
CTDSP1-209ENST00000488627 Q1RN00 199 aa8.96□□□□□ -0.98
CTDSP1-209ENST00000488627 C12orf57Q99622 126 aa8.96□□□□□ -0.98
CTDSP1-209ENST00000488627 HIGD1BQ9P298 99 aa8.96□□□□□ -0.98
CTDSP1-209ENST00000488627 SLC25A20O43772 301 aa8.95□□□□□ -0.98
CTDSP1-209ENST00000488627 LINC00575Q6W349 94 aa8.95□□□□□ -0.98
CTDSP1-209ENST00000488627 C2orf91Q6ZV80 131 aa8.95□□□□□ -0.98
CTDSP1-209ENST00000488627 VAMP8Q9BV40 100 aa8.95□□□□□ -0.98
CTDSP1-209ENST00000488627 CDIP1Q9H305 208 aa8.95□□□□□ -0.98
CTDSP1-209ENST00000488627 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
CTDSP1-209ENST00000488627 NHP2Q9NX24 153 aaKnown RBP8.94□□□□□ -0.98
CTDSP1-209ENST00000488627 MUC2Q02817 5179 aa8.94□□□□□ -0.98
CTDSP1-209ENST00000488627 VAMP3Q15836 100 aa8.93□□□□□ -0.98
CTDSP1-209ENST00000488627 CFC1BP0CG36 223 aa8.92□□□□□ -0.98
CTDSP1-209ENST00000488627 CFC1P0CG37 223 aa8.92□□□□□ -0.98
CTDSP1-209ENST00000488627 PYY3Q5JQD4 70 aa8.91□□□□□ -0.98
CTDSP1-209ENST00000488627 PRO1933Q9H354 126 aa8.91□□□□□ -0.98
CTDSP1-209ENST00000488627 CD164Q04900 197 aa8.9□□□□□ -0.98
CTDSP1-209ENST00000488627 HRCT1Q6UXD1 115 aa8.9□□□□□ -0.98
CTDSP1-209ENST00000488627 MUC17Q685J3 4493 aa8.9□□□□□ -0.99
CTDSP1-209ENST00000488627 hADV29S1A0JD25 119 aa8.89□□□□□ -0.99
CTDSP1-209ENST00000488627 A0A0G2JQZ4 141 aa8.88□□□□□ -0.99
CTDSP1-209ENST00000488627 Q6ZQY7 126 aa8.87□□□□□ -0.99
CTDSP1-209ENST00000488627 A0A0B4J2C4 111 aa8.86□□□□□ -0.99
CTDSP1-209ENST00000488627 BVES-AS1Q5T3Y7 98 aa8.86□□□□□ -0.99
CTDSP1-209ENST00000488627 H7C2G1 150 aa8.85□□□□□ -0.99
CTDSP1-209ENST00000488627 CEND1Q8N111 149 aa8.85□□□□□ -0.99
CTDSP1-209ENST00000488627 LIMD2Q9BT23 127 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 1019 ms