RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 COX7CP15954 63 aa13.09□□□□□ -0.31
NECAB3-213ENST00000488489 SMIM20Q8N5G0 67 aa13.09□□□□□ -0.31
NECAB3-213ENST00000488489 IGKV3D-7A0A0C4DH55 119 aa13.08□□□□□ -0.32
NECAB3-213ENST00000488489 JMJD7-PLA2G4BH0Y9G9 81 aa13.08□□□□□ -0.32
NECAB3-213ENST00000488489 IGLV6-57P01721 117 aa13.08□□□□□ -0.32
NECAB3-213ENST00000488489 LRCOL1A6NCL2 159 aa13.06□□□□□ -0.32
NECAB3-213ENST00000488489 TMEM256-PLSCR3K7ERE1 68 aa13.06□□□□□ -0.32
NECAB3-213ENST00000488489 WWC2-AS2Q96NR7 200 aa13.06□□□□□ -0.32
NECAB3-213ENST00000488489 TRBV10-3A0A0K0K1G6 114 aa13.05□□□□□ -0.32
NECAB3-213ENST00000488489 CNBPP62633 177 aaKnown RBP13.04□□□□□ -0.32
NECAB3-213ENST00000488489 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.03□□□□□ -0.32
NECAB3-213ENST00000488489 SERTAD4-AS1Q5TG53 156 aa13.03□□□□□ -0.32
NECAB3-213ENST00000488489 C6orf99Q4VX62 202 aa13.02□□□□□ -0.33
NECAB3-213ENST00000488489 Q6ZR54 194 aa13.02□□□□□ -0.33
NECAB3-213ENST00000488489 FAM168BA1KXE4 195 aa13.01□□□□□ -0.33
NECAB3-213ENST00000488489 M0R378 163 aa13.01□□□□□ -0.33
NECAB3-213ENST00000488489 CRYGAP11844 174 aa13.01□□□□□ -0.33
NECAB3-213ENST00000488489 LOC107984640A0A0U1RRK4 108 aa13□□□□□ -0.33
NECAB3-213ENST00000488489 C14orf177Q52M58 125 aa13□□□□□ -0.33
NECAB3-213ENST00000488489 A0A087WVE0 104 aa12.99□□□□□ -0.33
NECAB3-213ENST00000488489 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
NECAB3-213ENST00000488489 LINC00575Q6W349 94 aa12.98□□□□□ -0.33
NECAB3-213ENST00000488489 ATP5EP2Q5VTU8 51 aa12.98□□□□□ -0.33
NECAB3-213ENST00000488489 TRAV23DV6A0A075B6W5 121 aa12.97□□□□□ -0.33
NECAB3-213ENST00000488489 LY6G6CO95867 125 aa12.97□□□□□ -0.33
NECAB3-213ENST00000488489 DNAH6Q9C0G6 4158 aa12.97□□□□□ -0.33
NECAB3-213ENST00000488489 PLA2G2DQ9UNK4 145 aa12.97□□□□□ -0.33
NECAB3-213ENST00000488489 HECTD4Q9Y4D8 3996 aa12.95□□□□□ -0.34
NECAB3-213ENST00000488489 NKAPP1Q8N9T2 125 aa12.95□□□□□ -0.34
NECAB3-213ENST00000488489 A0A096LNI7 61 aa12.94□□□□□ -0.34
NECAB3-213ENST00000488489 SERP2Q8N6R1 65 aa12.94□□□□□ -0.34
NECAB3-213ENST00000488489 C7orf33Q8WU49 177 aa12.94□□□□□ -0.34
NECAB3-213ENST00000488489 hADV29S1A0JD25 119 aa12.93□□□□□ -0.34
NECAB3-213ENST00000488489 ZNF73O43830 326 aaPredicted RBP12.93□□□□□ -0.34
NECAB3-213ENST00000488489 LINC00476Q8WZB0 136 aa12.93□□□□□ -0.34
NECAB3-213ENST00000488489 ALMS1Q8TCU4 4167 aa12.93□□□□□ -0.34
NECAB3-213ENST00000488489 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
NECAB3-213ENST00000488489 C16orf90A8MZG2 172 aa12.92□□□□□ -0.34
NECAB3-213ENST00000488489 IGKV2-24A0A0C4DH68 120 aa12.91□□□□□ -0.34
NECAB3-213ENST00000488489 HYDINQ4G0P3 5121 aa12.91□□□□□ -0.34
NECAB3-213ENST00000488489 A0A087WTM6 91 aa12.91□□□□□ -0.34
NECAB3-213ENST00000488489 FAM19A5Q7Z5A7 132 aaPredicted RBP12.91□□□□□ -0.34
NECAB3-213ENST00000488489 C9orf163Q8N9P6 203 aa12.91□□□□□ -0.34
NECAB3-213ENST00000488489 DIRC1Q969H9 104 aa12.9□□□□□ -0.34
NECAB3-213ENST00000488489 Q6ZQT0 140 aa12.89□□□□□ -0.35
NECAB3-213ENST00000488489 UBL5Q9BZL1 73 aa12.89□□□□□ -0.35
NECAB3-213ENST00000488489 DNAH17Q9UFH2 4485 aa12.89□□□□□ -0.35
NECAB3-213ENST00000488489 LOC110117498A0A087WWA1 95 aa12.89□□□□□ -0.35
NECAB3-213ENST00000488489 RBM3P98179 157 aaKnown RBP12.89□□□□□ -0.35
NECAB3-213ENST00000488489 RPL37AP8A6NKH3 93 aa12.87□□□□□ -0.35
NECAB3-213ENST00000488489 C3orf84H3BNL1 204 aa12.87□□□□□ -0.35
NECAB3-213ENST00000488489 KCNQ1DNQ9H478 68 aa12.87□□□□□ -0.35
NECAB3-213ENST00000488489 CHTF8P0CG12 524 aa12.86□□□□□ -0.35
NECAB3-213ENST00000488489 C1orf134Q5TEV5 83 aa12.86□□□□□ -0.35
NECAB3-213ENST00000488489 A0A1W2PNN7 141 aa12.86□□□□□ -0.35
NECAB3-213ENST00000488489 CYSTM1Q9H1C7 97 aa12.86□□□□□ -0.35
NECAB3-213ENST00000488489 H3BQ85 93 aa12.85□□□□□ -0.35
NECAB3-213ENST00000488489 ELOF1P60002 83 aaKnown RBP12.85□□□□□ -0.35
NECAB3-213ENST00000488489 FRAS1Q86XX4 4008 aa12.85□□□□□ -0.35
NECAB3-213ENST00000488489 LAMTOR3Q9UHA4 124 aa12.85□□□□□ -0.35
NECAB3-213ENST00000488489 IGLV1-50A0A075B6I6 118 aa12.85□□□□□ -0.35
NECAB3-213ENST00000488489 MRPL55Q7Z7F7 128 aaKnown RBP12.85□□□□□ -0.35
NECAB3-213ENST00000488489 COX7BP24311 80 aa12.84□□□□□ -0.35
NECAB3-213ENST00000488489 FUSP35637 526 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■■■□□ 18.5
NECAB3-213ENST00000488489 TRBV7-6A0A0J9YX20 115 aa12.83□□□□□ -0.35
NECAB3-213ENST00000488489 Q6ZQY7 126 aa12.83□□□□□ -0.35
NECAB3-213ENST00000488489 FAM19A1Q7Z5A9 133 aa12.83□□□□□ -0.35
NECAB3-213ENST00000488489 J3KT08 172 aa12.81□□□□□ -0.36
NECAB3-213ENST00000488489 GHRHP01286 108 aa12.81□□□□□ -0.36
NECAB3-213ENST00000488489 TMEM258P61165 79 aa12.81□□□□□ -0.36
NECAB3-213ENST00000488489 LINC00528Q8N1L1 170 aa12.8□□□□□ -0.36
NECAB3-213ENST00000488489 PANO1I0J062 215 aa12.8□□□□□ -0.36
NECAB3-213ENST00000488489 PDE6GP18545 87 aa12.8□□□□□ -0.36
NECAB3-213ENST00000488489 DSCR8Q96T75 97 aa12.8□□□□□ -0.36
NECAB3-213ENST00000488489 KRTAP4-16G5E9R7 235 aaPredicted RBP12.77□□□□□ -0.36
NECAB3-213ENST00000488489 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.77□□□□□ -0.36
NECAB3-213ENST00000488489 SPRR1AP35321 89 aa12.77□□□□□ -0.37
NECAB3-213ENST00000488489 RPS28P62857 69 aaKnown RBP12.77□□□□□ -0.37
NECAB3-213ENST00000488489 PRYO14603 147 aa12.76□□□□□ -0.37
NECAB3-213ENST00000488489 RTL8CO15255 209 aa12.75□□□□□ -0.37
NECAB3-213ENST00000488489 TNP2Q05952 138 aa12.75□□□□□ -0.37
NECAB3-213ENST00000488489 Q6ZVQ6 151 aa12.75□□□□□ -0.37
NECAB3-213ENST00000488489 DNAH11Q96DT5 4516 aa12.75□□□□□ -0.37
NECAB3-213ENST00000488489 LINC01547P58512 204 aaPredicted RBP12.74□□□□□ -0.37
NECAB3-213ENST00000488489 SACSQ9NZJ4 4579 aa12.74□□□□□ -0.37
NECAB3-213ENST00000488489 PKIGQ9Y2B9 76 aa12.73□□□□□ -0.37
NECAB3-213ENST00000488489 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.73□□□□□ -0.37
NECAB3-213ENST00000488489 FAT2Q9NYQ8 4349 aa12.73□□□□□ -0.37
NECAB3-213ENST00000488489 BCE1O60756 84 aa12.73□□□□□ -0.37
NECAB3-213ENST00000488489 TRBV7-4A0A0J9YYF1 115 aa12.72□□□□□ -0.37
NECAB3-213ENST00000488489 PHF5AQ7RTV0 110 aaKnown RBP12.72□□□□□ -0.37
NECAB3-213ENST00000488489 LINC00474Q9P2X8 69 aa12.72□□□□□ -0.37
NECAB3-213ENST00000488489 Q6ZRX8 168 aa12.71□□□□□ -0.38
NECAB3-213ENST00000488489 KRTAP11-1Q8IUC1 163 aa12.71□□□□□ -0.38
NECAB3-213ENST00000488489 CXCL6P80162 114 aa12.7□□□□□ -0.38
NECAB3-213ENST00000488489 HAMPP81172 84 aa12.7□□□□□ -0.38
NECAB3-213ENST00000488489 REG3GQ6UW15 175 aa12.7□□□□□ -0.38
NECAB3-213ENST00000488489 SPACA4Q8TDM5 124 aa12.7□□□□□ -0.38
NECAB3-213ENST00000488489 DPH3Q96FX2 82 aa12.7□□□□□ -0.38
NECAB3-213ENST00000488489 Q9BRP9 147 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms