RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 SLC25A34Q6PIV7 304 aa6.68□□□□□ -1.34
UBE4B-210ENST00000488228 COPS9Q8WXC6 57 aa6.68□□□□□ -1.34
UBE4B-210ENST00000488228 TRAV23DV6A0A075B6W5 121 aa6.67□□□□□ -1.34
UBE4B-210ENST00000488228 KRTAP29-1A8MX34 341 aaPredicted RBP6.67□□□□□ -1.34
UBE4B-210ENST00000488228 SPRR1AP35321 89 aa6.67□□□□□ -1.34
UBE4B-210ENST00000488228 C2orf91Q6ZV80 131 aa6.67□□□□□ -1.34
UBE4B-210ENST00000488228 OR13C6PQ8NH95 151 aa6.67□□□□□ -1.34
UBE4B-210ENST00000488228 PPDPFQ9H3Y8 114 aa6.67□□□□□ -1.34
UBE4B-210ENST00000488228 ETDCA0A1B0GVM5 59 aa6.66□□□□□ -1.34
UBE4B-210ENST00000488228 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
UBE4B-210ENST00000488228 J3QL48 77 aa6.66□□□□□ -1.34
UBE4B-210ENST00000488228 OXTP01178 125 aa6.66□□□□□ -1.34
UBE4B-210ENST00000488228 HIST1H4GQ99525 98 aa6.66□□□□□ -1.34
UBE4B-210ENST00000488228 HERC1Q15751 4861 aa6.65□□□□□ -1.34
UBE4B-210ENST00000488228 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.34
UBE4B-210ENST00000488228 HIGD2AQ9BW72 106 aa6.65□□□□□ -1.34
UBE4B-210ENST00000488228 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
UBE4B-210ENST00000488228 A4D1N5 150 aa6.64□□□□□ -1.35
UBE4B-210ENST00000488228 ZNF73O43830 326 aaPredicted RBP6.64□□□□□ -1.35
UBE4B-210ENST00000488228 MT1HL1P0DM35 61 aa6.64□□□□□ -1.35
UBE4B-210ENST00000488228 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
UBE4B-210ENST00000488228 C12orf57Q99622 126 aa6.64□□□□□ -1.35
UBE4B-210ENST00000488228 HIGD1BQ9P298 99 aa6.64□□□□□ -1.35
UBE4B-210ENST00000488228 A6NDN8 102 aa6.63□□□□□ -1.35
UBE4B-210ENST00000488228 B5MCH6 92 aa6.63□□□□□ -1.35
UBE4B-210ENST00000488228 LINC01600Q96MT4 127 aa6.63□□□□□ -1.35
UBE4B-210ENST00000488228 SMIM6P0DI80 62 aa6.62□□□□□ -1.35
UBE4B-210ENST00000488228 Q6ZRX8 168 aa6.62□□□□□ -1.35
UBE4B-210ENST00000488228 PCP4P48539 62 aa6.61□□□□□ -1.35
UBE4B-210ENST00000488228 PRR26Q8N8Z3 221 aa6.61□□□□□ -1.35
UBE4B-210ENST00000488228 SMCR5Q8TEV8 140 aa6.61□□□□□ -1.35
UBE4B-210ENST00000488228 C6orf99Q4VX62 202 aa6.6□□□□□ -1.35
UBE4B-210ENST00000488228 Q9BRP9 147 aa6.6□□□□□ -1.35
UBE4B-210ENST00000488228 ANAPC11Q9NYG5 84 aa6.6□□□□□ -1.35
UBE4B-210ENST00000488228 TRAV13-2A0A0B4J235 113 aa6.59□□□□□ -1.35
UBE4B-210ENST00000488228 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
UBE4B-210ENST00000488228 RPL13AP40429 203 aaKnown RBP6.59□□□□□ -1.35
UBE4B-210ENST00000488228 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
UBE4B-210ENST00000488228 UQCR10Q9UDW1 63 aa6.59□□□□□ -1.35
UBE4B-210ENST00000488228 A0A087X002 238 aa6.57□□□□□ -1.36
UBE4B-210ENST00000488228 FXYD2P54710 66 aa6.57□□□□□ -1.36
UBE4B-210ENST00000488228 ELOF1P60002 83 aaKnown RBP6.57□□□□□ -1.36
UBE4B-210ENST00000488228 TAL2Q16559 108 aa6.57□□□□□ -1.36
UBE4B-210ENST00000488228 CEND1Q8N111 149 aa6.57□□□□□ -1.36
UBE4B-210ENST00000488228 SMIM11BQ8TCY0 68 aa6.57□□□□□ -1.36
UBE4B-210ENST00000488228 SPRR4Q96PI1 79 aa6.57□□□□□ -1.36
UBE4B-210ENST00000488228 COX7BP24311 80 aa6.56□□□□□ -1.36
UBE4B-210ENST00000488228 KRTAP10-8P60410 259 aa6.56□□□□□ -1.36
UBE4B-210ENST00000488228 HSD52Q0P140 79 aa6.56□□□□□ -1.36
UBE4B-210ENST00000488228 H7C2G1 150 aa6.55□□□□□ -1.36
UBE4B-210ENST00000488228 CFC1BP0CG36 223 aa6.55□□□□□ -1.36
UBE4B-210ENST00000488228 CFC1P0CG37 223 aa6.55□□□□□ -1.36
UBE4B-210ENST00000488228 HINT1P49773 126 aaPredicted RBP6.55□□□□□ -1.36
UBE4B-210ENST00000488228 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
UBE4B-210ENST00000488228 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
UBE4B-210ENST00000488228 KRTAP13-2Q52LG2 175 aa6.54□□□□□ -1.36
UBE4B-210ENST00000488228 RAB37Q96AX2 223 aa6.54□□□□□ -1.36
UBE4B-210ENST00000488228 TRBV7-6A0A0J9YX20 115 aa6.53□□□□□ -1.36
UBE4B-210ENST00000488228 A0A1B0GWB2 263 aa6.53□□□□□ -1.36
UBE4B-210ENST00000488228 CRYGAP11844 174 aa6.53□□□□□ -1.36
UBE4B-210ENST00000488228 FAM229BQ4G0N7 80 aa6.53□□□□□ -1.36
UBE4B-210ENST00000488228 GAGE2AQ6NT46 116 aa6.53□□□□□ -1.36
UBE4B-210ENST00000488228 ST20-AS1Q8NBB2 130 aa6.53□□□□□ -1.36
UBE4B-210ENST00000488228 K7ERJ3 54 aa6.52□□□□□ -1.37
UBE4B-210ENST00000488228 C3orf22Q8N5N4 141 aa6.52□□□□□ -1.37
UBE4B-210ENST00000488228 NHP2Q9NX24 153 aaKnown RBP6.52□□□□□ -1.37
UBE4B-210ENST00000488228 DHRS4-AS1Q9P1J3 65 aa6.52□□□□□ -1.37
UBE4B-210ENST00000488228 HMCN2Q8NDA2 5059 aa6.51□□□□□ -1.37
UBE4B-210ENST00000488228 LINC00483Q53H64 154 aa6.51□□□□□ -1.37
UBE4B-210ENST00000488228 Q1RN00 199 aa6.5□□□□□ -1.37
UBE4B-210ENST00000488228 TYMSOSQ8TAI1 123 aa6.5□□□□□ -1.37
UBE4B-210ENST00000488228 PRO1854Q9UHT4 67 aa6.49□□□□□ -1.37
UBE4B-210ENST00000488228 TSTD3H0UI37 97 aa6.48□□□□□ -1.37
UBE4B-210ENST00000488228 BVES-AS1Q5T3Y7 98 aa6.48□□□□□ -1.37
UBE4B-210ENST00000488228 VAMP3Q15836 100 aa6.47□□□□□ -1.37
UBE4B-210ENST00000488228 IGLV9-49A0A0B4J1Y8 123 aa6.46□□□□□ -1.38
UBE4B-210ENST00000488228 MOBPQ13875 183 aa6.46□□□□□ -1.38
UBE4B-210ENST00000488228 LINC00575Q6W349 94 aa6.46□□□□□ -1.38
UBE4B-210ENST00000488228 DEFB105AQ8NG35 78 aa6.46□□□□□ -1.38
UBE4B-210ENST00000488228 TRIAP1O43715 76 aa6.44□□□□□ -1.38
UBE4B-210ENST00000488228 SLC25A20O43772 301 aa6.44□□□□□ -1.38
UBE4B-210ENST00000488228 TSPAN13O95857 204 aa6.44□□□□□ -1.38
UBE4B-210ENST00000488228 SPRR1BP22528 89 aa6.44□□□□□ -1.38
UBE4B-210ENST00000488228 LINC01547P58512 204 aaPredicted RBP6.44□□□□□ -1.38
UBE4B-210ENST00000488228 C9orf153Q5TBE3 101 aa6.44□□□□□ -1.38
UBE4B-210ENST00000488228 Q6ZQY7 126 aa6.44□□□□□ -1.38
UBE4B-210ENST00000488228 LINC00304Q8N9R0 145 aa6.44□□□□□ -1.38
UBE4B-210ENST00000488228 IGLV5-48A0A075B6I7 105 aa6.43□□□□□ -1.38
UBE4B-210ENST00000488228 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
UBE4B-210ENST00000488228 M0R143 59 aa6.43□□□□□ -1.38
UBE4B-210ENST00000488228 Q8NBF4 154 aa6.43□□□□□ -1.38
UBE4B-210ENST00000488228 FAM218AQ96MZ4 157 aa6.43□□□□□ -1.38
UBE4B-210ENST00000488228 TEX49A0A1B0GTD5 131 aa6.42□□□□□ -1.38
UBE4B-210ENST00000488228 PSMB2P49721 201 aa6.41□□□□□ -1.38
UBE4B-210ENST00000488228 CLEC2BQ92478 149 aa6.41□□□□□ -1.38
UBE4B-210ENST00000488228 H0YGX0 51 aa6.4□□□□□ -1.38
UBE4B-210ENST00000488228 BATFQ16520 125 aa6.4□□□□□ -1.38
UBE4B-210ENST00000488228 SMIM29Q86T20 159 aa6.4□□□□□ -1.38
UBE4B-210ENST00000488228 Q8N377 158 aa6.4□□□□□ -1.38
UBE4B-210ENST00000488228 LAMTOR3Q9UHA4 124 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms