RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 HIST1H2BCP62807 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 MOBPQ13875 183 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST2H2BEQ16778 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 GAGE2AQ6NT46 116 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BHQ93079 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 LITAFQ99732 161 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BNQ99877 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 HIST1H2BMQ99879 126 aa6.34□□□□□ -1.39
RAB11FIP3-210ENST00000487899 S100A12P80511 92 aa6.33□□□□□ -1.4
RAB11FIP3-210ENST00000487899 KRTAP13-3Q3SY46 172 aa6.33□□□□□ -1.4
RAB11FIP3-210ENST00000487899 IGLV9-49A0A0B4J1Y8 123 aa6.32□□□□□ -1.4
RAB11FIP3-210ENST00000487899 SYS1-DBNDD2H3BUS1 97 aa6.32□□□□□ -1.4
RAB11FIP3-210ENST00000487899 S100A7L2Q5SY68 101 aa6.32□□□□□ -1.4
RAB11FIP3-210ENST00000487899 LINC01545Q5VT33 79 aa6.32□□□□□ -1.4
RAB11FIP3-210ENST00000487899 ZNF73O43830 326 aaPredicted RBP6.31□□□□□ -1.4
RAB11FIP3-210ENST00000487899 SPINK1P00995 79 aa6.31□□□□□ -1.4
RAB11FIP3-210ENST00000487899 RPS29P62273 56 aaKnown RBP6.31□□□□□ -1.4
RAB11FIP3-210ENST00000487899 Q8N377 158 aa6.31□□□□□ -1.4
RAB11FIP3-210ENST00000487899 C4orf48Q5BLP8 95 aa6.3□□□□□ -1.4
RAB11FIP3-210ENST00000487899 ST20-AS1Q8NBB2 130 aa6.29□□□□□ -1.4
RAB11FIP3-210ENST00000487899 LINC00308Q8TCZ7 52 aa6.29□□□□□ -1.4
RAB11FIP3-210ENST00000487899 TTTY13Q9BZ97 58 aa6.29□□□□□ -1.4
RAB11FIP3-210ENST00000487899 SPANXCQ9NY87 97 aa6.29□□□□□ -1.4
RAB11FIP3-210ENST00000487899 TIMM17BO60830 172 aa6.28□□□□□ -1.4
RAB11FIP3-210ENST00000487899 C3orf79P0CE67 100 aa6.27□□□□□ -1.41
RAB11FIP3-210ENST00000487899 JOSD1Q15040 202 aaPredicted RBP6.27□□□□□ -1.41
RAB11FIP3-210ENST00000487899 PET117Q6UWS5 81 aa6.27□□□□□ -1.41
RAB11FIP3-210ENST00000487899 SSBP3-AS1Q7Z2R9 100 aa6.27□□□□□ -1.41
RAB11FIP3-210ENST00000487899 ZNF815PA8K554 130 aa6.26□□□□□ -1.41
RAB11FIP3-210ENST00000487899 COA6Q5JTJ3 125 aaKnown RBP6.26□□□□□ -1.41
RAB11FIP3-210ENST00000487899 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
RAB11FIP3-210ENST00000487899 C9orf153Q5TBE3 101 aa6.25□□□□□ -1.41
RAB11FIP3-210ENST00000487899 KRTAP4-1Q9BYQ7 146 aa6.25□□□□□ -1.41
RAB11FIP3-210ENST00000487899 SPRR1BP22528 89 aa6.24□□□□□ -1.41
RAB11FIP3-210ENST00000487899 SPANXDQ9BXN6 97 aa6.24□□□□□ -1.41
RAB11FIP3-210ENST00000487899 C5orf52A6NGY3 159 aa6.23□□□□□ -1.41
RAB11FIP3-210ENST00000487899 SLC25A20O43772 301 aa6.23□□□□□ -1.41
RAB11FIP3-210ENST00000487899 ELOF1P60002 83 aaKnown RBP6.23□□□□□ -1.41
RAB11FIP3-210ENST00000487899 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
RAB11FIP3-210ENST00000487899 OR13C6PQ8NH95 151 aa6.22□□□□□ -1.41
RAB11FIP3-210ENST00000487899 CBY1Q9Y3M2 126 aa6.22□□□□□ -1.41
RAB11FIP3-210ENST00000487899 FSIP2Q5CZC0 6907 aa6.22□□□□□ -1.41
RAB11FIP3-210ENST00000487899 KRTDAPP60985 99 aa6.21□□□□□ -1.42
RAB11FIP3-210ENST00000487899 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
RAB11FIP3-210ENST00000487899 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
RAB11FIP3-210ENST00000487899 XP32Q5T750 250 aa6.2□□□□□ -1.42
RAB11FIP3-210ENST00000487899 COX7BP24311 80 aa6.19□□□□□ -1.42
RAB11FIP3-210ENST00000487899 HINT1P49773 126 aaPredicted RBP6.19□□□□□ -1.42
RAB11FIP3-210ENST00000487899 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
RAB11FIP3-210ENST00000487899 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
RAB11FIP3-210ENST00000487899 SCGB1D4Q6XE38 83 aa6.17□□□□□ -1.42
RAB11FIP3-210ENST00000487899 PCP2Q8IVA1 136 aa6.17□□□□□ -1.42
RAB11FIP3-210ENST00000487899 LINC00518Q8N0U6 118 aa6.17□□□□□ -1.42
RAB11FIP3-210ENST00000487899 TRBV7-6A0A0J9YX20 115 aa6.16□□□□□ -1.42
RAB11FIP3-210ENST00000487899 C20orf202A1L168 122 aa6.16□□□□□ -1.42
RAB11FIP3-210ENST00000487899 LINC01547P58512 204 aaPredicted RBP6.16□□□□□ -1.42
RAB11FIP3-210ENST00000487899 Q1RN00 199 aa6.16□□□□□ -1.42
RAB11FIP3-210ENST00000487899 SLC25A34Q6PIV7 304 aa6.16□□□□□ -1.42
RAB11FIP3-210ENST00000487899 IGLV5-48A0A075B6I7 105 aa6.15□□□□□ -1.42
RAB11FIP3-210ENST00000487899 IFITM1P13164 125 aa6.15□□□□□ -1.42
RAB11FIP3-210ENST00000487899 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.42
RAB11FIP3-210ENST00000487899 SMIM29Q86T20 159 aa6.15□□□□□ -1.42
RAB11FIP3-210ENST00000487899 LIMD2Q9BT23 127 aa6.15□□□□□ -1.42
RAB11FIP3-210ENST00000487899 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.42
RAB11FIP3-210ENST00000487899 A0A1B0GWB2 263 aa6.14□□□□□ -1.43
RAB11FIP3-210ENST00000487899 TEX49A0A1B0GTD5 131 aa6.13□□□□□ -1.43
RAB11FIP3-210ENST00000487899 Q6ZVH6 145 aa6.13□□□□□ -1.43
RAB11FIP3-210ENST00000487899 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
RAB11FIP3-210ENST00000487899 CD164Q04900 197 aa6.12□□□□□ -1.43
RAB11FIP3-210ENST00000487899 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
RAB11FIP3-210ENST00000487899 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
RAB11FIP3-210ENST00000487899 DEFB105AQ8NG35 78 aa6.12□□□□□ -1.43
RAB11FIP3-210ENST00000487899 COPS9Q8WXC6 57 aa6.12□□□□□ -1.43
RAB11FIP3-210ENST00000487899 A0A0G2JQZ4 141 aa6.11□□□□□ -1.43
RAB11FIP3-210ENST00000487899 A6NDN8 102 aa6.11□□□□□ -1.43
RAB11FIP3-210ENST00000487899 TAL2Q16559 108 aa6.11□□□□□ -1.43
RAB11FIP3-210ENST00000487899 C9orf92A6NGG3 77 aa6.1□□□□□ -1.43
RAB11FIP3-210ENST00000487899 H7C2G1 150 aa6.1□□□□□ -1.43
RAB11FIP3-210ENST00000487899 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
RAB11FIP3-210ENST00000487899 HIST3H2BBQ8N257 126 aa6.1□□□□□ -1.43
RAB11FIP3-210ENST00000487899 SMIM11BQ8TCY0 68 aa6.1□□□□□ -1.43
RAB11FIP3-210ENST00000487899 PRO1933Q9H354 126 aa6.1□□□□□ -1.43
RAB11FIP3-210ENST00000487899 AKR1D1P51857 326 aa6.09□□□□□ -1.43
RAB11FIP3-210ENST00000487899 Q5XG85 94 aa6.09□□□□□ -1.43
RAB11FIP3-210ENST00000487899 HIST1H2BLQ99880 126 aa6.09□□□□□ -1.43
RAB11FIP3-210ENST00000487899 TRAV13-2A0A0B4J235 113 aa6.08□□□□□ -1.44
RAB11FIP3-210ENST00000487899 A4D1N5 150 aa6.08□□□□□ -1.44
RAB11FIP3-210ENST00000487899 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
RAB11FIP3-210ENST00000487899 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
RAB11FIP3-210ENST00000487899 PCOTHQ58A44 107 aa6.06□□□□□ -1.44
RAB11FIP3-210ENST00000487899 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
RAB11FIP3-210ENST00000487899 NHP2Q9NX24 153 aaKnown RBP6.05□□□□□ -1.44
RAB11FIP3-210ENST00000487899 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
RAB11FIP3-210ENST00000487899 IGLV8-61A0A075B6I0 122 aa6.03□□□□□ -1.44
RAB11FIP3-210ENST00000487899 LINC00575Q6W349 94 aa6.03□□□□□ -1.44
RAB11FIP3-210ENST00000487899 S100A2P29034 98 aa6.02□□□□□ -1.45
RAB11FIP3-210ENST00000487899 MT1HP80294 61 aa6.02□□□□□ -1.45
RAB11FIP3-210ENST00000487899 Q6ZQY7 126 aa6.02□□□□□ -1.45
RAB11FIP3-210ENST00000487899 C12orf57Q99622 126 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms