RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 SOSTDC1Q6X4U4 206 aa6.64□□□□□ -1.35
SPEN-205ENST00000487496 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
SPEN-205ENST00000487496 ZNF706Q9Y5V0 76 aaPredicted RBP6.64□□□□□ -1.35
SPEN-205ENST00000487496 IGLV6-57P01721 117 aa6.63□□□□□ -1.35
SPEN-205ENST00000487496 NPC2P61916 151 aa6.63□□□□□ -1.35
SPEN-205ENST00000487496 COA6Q5JTJ3 125 aaKnown RBP6.63□□□□□ -1.35
SPEN-205ENST00000487496 B5MCH6 92 aa6.62□□□□□ -1.35
SPEN-205ENST00000487496 C3orf79P0CE67 100 aa6.62□□□□□ -1.35
SPEN-205ENST00000487496 S100A7L2Q5SY68 101 aa6.62□□□□□ -1.35
SPEN-205ENST00000487496 CTAG1AP78358 180 aa6.61□□□□□ -1.35
SPEN-205ENST00000487496 LITAFQ99732 161 aa6.61□□□□□ -1.35
SPEN-205ENST00000487496 RETNLBQ9BQ08 111 aa6.61□□□□□ -1.35
SPEN-205ENST00000487496 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
SPEN-205ENST00000487496 ERC2-IT1O76042 136 aa6.6□□□□□ -1.35
SPEN-205ENST00000487496 TRAV23DV6A0A075B6W5 121 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 TIMM17BO60830 172 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 PCP4P48539 62 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 KRTDAPP60985 99 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 LINC00483Q53H64 154 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 SPAG11AQ6PDA7 123 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 Q6ZRX8 168 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 LINC00308Q8TCZ7 52 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 Q9BRP9 147 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 TTTY13Q9BZ97 58 aa6.59□□□□□ -1.35
SPEN-205ENST00000487496 ZNF815PA8K554 130 aa6.58□□□□□ -1.36
SPEN-205ENST00000487496 GAGE2AQ6NT46 116 aa6.58□□□□□ -1.36
SPEN-205ENST00000487496 SPANXCQ9NY87 97 aa6.58□□□□□ -1.36
SPEN-205ENST00000487496 ZNF73O43830 326 aaPredicted RBP6.57□□□□□ -1.36
SPEN-205ENST00000487496 Q8NBF4 154 aa6.57□□□□□ -1.36
SPEN-205ENST00000487496 IGLV7-46A0A075B6I9 117 aa6.55□□□□□ -1.36
SPEN-205ENST00000487496 C20orf202A1L168 122 aa6.55□□□□□ -1.36
SPEN-205ENST00000487496 JOSD1Q15040 202 aaPredicted RBP6.55□□□□□ -1.36
SPEN-205ENST00000487496 OR13C6PQ8NH95 151 aa6.54□□□□□ -1.36
SPEN-205ENST00000487496 CBY1Q9Y3M2 126 aa6.54□□□□□ -1.36
SPEN-205ENST00000487496 IGLV9-49A0A0B4J1Y8 123 aa6.53□□□□□ -1.36
SPEN-205ENST00000487496 HINT1P49773 126 aaPredicted RBP6.53□□□□□ -1.36
SPEN-205ENST00000487496 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
SPEN-205ENST00000487496 ATOH7Q8N100 152 aa6.53□□□□□ -1.36
SPEN-205ENST00000487496 SPINK1P00995 79 aa6.52□□□□□ -1.37
SPEN-205ENST00000487496 MOBPQ13875 183 aa6.52□□□□□ -1.37
SPEN-205ENST00000487496 SCGB1D4Q6XE38 83 aa6.52□□□□□ -1.37
SPEN-205ENST00000487496 SSBP3-AS1Q7Z2R9 100 aa6.52□□□□□ -1.37
SPEN-205ENST00000487496 LINC00518Q8N0U6 118 aa6.52□□□□□ -1.37
SPEN-205ENST00000487496 SPANXDQ9BXN6 97 aa6.52□□□□□ -1.37
SPEN-205ENST00000487496 ST20-AS1Q8NBB2 130 aa6.51□□□□□ -1.37
SPEN-205ENST00000487496 MUC2Q02817 5179 aa6.5□□□□□ -1.37
SPEN-205ENST00000487496 C5orf52A6NGY3 159 aa6.5□□□□□ -1.37
SPEN-205ENST00000487496 AKR1D1P51857 326 aa6.5□□□□□ -1.37
SPEN-205ENST00000487496 FP248Q71RG6 208 aaPredicted RBP6.5□□□□□ -1.37
SPEN-205ENST00000487496 PCP2Q8IVA1 136 aa6.5□□□□□ -1.37
SPEN-205ENST00000487496 IFITM1P13164 125 aa6.48□□□□□ -1.37
SPEN-205ENST00000487496 C6orf99Q4VX62 202 aa6.48□□□□□ -1.37
SPEN-205ENST00000487496 HIST3H2BBQ8N257 126 aa6.48□□□□□ -1.37
SPEN-205ENST00000487496 COPS9Q8WXC6 57 aa6.48□□□□□ -1.37
SPEN-205ENST00000487496 DHRS4-AS1Q9P1J3 65 aa6.48□□□□□ -1.37
SPEN-205ENST00000487496 S100A1P23297 94 aa6.47□□□□□ -1.37
SPEN-205ENST00000487496 COX7BP24311 80 aa6.47□□□□□ -1.37
SPEN-205ENST00000487496 ELOF1P60002 83 aaKnown RBP6.47□□□□□ -1.37
SPEN-205ENST00000487496 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
SPEN-205ENST00000487496 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
SPEN-205ENST00000487496 C9orf153Q5TBE3 101 aa6.47□□□□□ -1.37
SPEN-205ENST00000487496 Q6ZVH6 145 aa6.47□□□□□ -1.37
SPEN-205ENST00000487496 MUSTN1Q8IVN3 82 aa6.47□□□□□ -1.37
SPEN-205ENST00000487496 HIST1H2BLQ99880 126 aa6.47□□□□□ -1.37
SPEN-205ENST00000487496 MUC17Q685J3 4493 aa6.46□□□□□ -1.37
SPEN-205ENST00000487496 SPRR1BP22528 89 aa6.46□□□□□ -1.38
SPEN-205ENST00000487496 S100A2P29034 98 aa6.46□□□□□ -1.38
SPEN-205ENST00000487496 Q8N377 158 aa6.46□□□□□ -1.38
SPEN-205ENST00000487496 TRBV7-6A0A0J9YX20 115 aa6.44□□□□□ -1.38
SPEN-205ENST00000487496 A6NDN8 102 aa6.44□□□□□ -1.38
SPEN-205ENST00000487496 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
SPEN-205ENST00000487496 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
SPEN-205ENST00000487496 SLC25A20O43772 301 aa6.43□□□□□ -1.38
SPEN-205ENST00000487496 S100A6P06703 90 aa6.43□□□□□ -1.38
SPEN-205ENST00000487496 SLC25A34Q6PIV7 304 aa6.43□□□□□ -1.38
SPEN-205ENST00000487496 A0A1B0GWB2 263 aa6.42□□□□□ -1.38
SPEN-205ENST00000487496 LAMTOR3Q9UHA4 124 aa6.42□□□□□ -1.38
SPEN-205ENST00000487496 A0A0U1RQV1 116 aa6.41□□□□□ -1.38
SPEN-205ENST00000487496 HSBP1L1C9JCN9 74 aa6.41□□□□□ -1.38
SPEN-205ENST00000487496 TAL2Q16559 108 aa6.41□□□□□ -1.38
SPEN-205ENST00000487496 DEFB105AQ8NG35 78 aa6.41□□□□□ -1.38
SPEN-205ENST00000487496 TRAV13-2A0A0B4J235 113 aa6.4□□□□□ -1.38
SPEN-205ENST00000487496 TEX49A0A1B0GTD5 131 aa6.4□□□□□ -1.38
SPEN-205ENST00000487496 Q1RN00 199 aa6.39□□□□□ -1.39
SPEN-205ENST00000487496 LCE2CQ5TA81 110 aa6.39□□□□□ -1.39
SPEN-205ENST00000487496 SMIM11BQ8TCY0 68 aa6.39□□□□□ -1.39
SPEN-205ENST00000487496 HRCT1Q6UXD1 115 aa6.38□□□□□ -1.39
SPEN-205ENST00000487496 SMIM29Q86T20 159 aa6.38□□□□□ -1.39
SPEN-205ENST00000487496 IGLV5-48A0A075B6I7 105 aa6.37□□□□□ -1.39
SPEN-205ENST00000487496 LINC01547P58512 204 aaPredicted RBP6.37□□□□□ -1.39
SPEN-205ENST00000487496 ASB16-AS1Q495Z4 193 aa6.36□□□□□ -1.39
SPEN-205ENST00000487496 LIMD2Q9BT23 127 aa6.36□□□□□ -1.39
SPEN-205ENST00000487496 PRO1933Q9H354 126 aa6.36□□□□□ -1.39
SPEN-205ENST00000487496 NHP2Q9NX24 153 aaKnown RBP6.36□□□□□ -1.39
SPEN-205ENST00000487496 CD164Q04900 197 aa6.35□□□□□ -1.39
SPEN-205ENST00000487496 VAMP3Q15836 100 aa6.33□□□□□ -1.4
SPEN-205ENST00000487496 H7C2G1 150 aa6.32□□□□□ -1.4
SPEN-205ENST00000487496 COX8AP10176 69 aa6.32□□□□□ -1.4
SPEN-205ENST00000487496 SEC61BP60468 96 aaKnown RBP6.32□□□□□ -1.4
SPEN-205ENST00000487496 XP32Q5T750 250 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms