RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 ZNF706Q9Y5V0 76 aaPredicted RBP12.21□□□□□ -0.45
RPL35-203ENST00000487431 FP248Q71RG6 208 aaPredicted RBP12.2□□□□□ -0.46
RPL35-203ENST00000487431 LINC00337Q8N6G1 96 aa12.2□□□□□ -0.46
RPL35-203ENST00000487431 TTTY13Q9BZ97 58 aa12.2□□□□□ -0.46
RPL35-203ENST00000487431 KCNQ1DNQ9H478 68 aa12.19□□□□□ -0.46
RPL35-203ENST00000487431 KRTAP4-16G5E9R7 235 aaPredicted RBP12.18□□□□□ -0.46
RPL35-203ENST00000487431 PCP2Q8IVA1 136 aa12.18□□□□□ -0.46
RPL35-203ENST00000487431 VAMP8Q9BV40 100 aa12.18□□□□□ -0.46
RPL35-203ENST00000487431 DAND5Q8N907 189 aa12.17□□□□□ -0.46
RPL35-203ENST00000487431 LOC107984156A0A0G2JMH3 177 aa12.16□□□□□ -0.46
RPL35-203ENST00000487431 ARL17AQ8IVW1 177 aa12.16□□□□□ -0.46
RPL35-203ENST00000487431 BOD1L2Q8IYS8 172 aa12.16□□□□□ -0.46
RPL35-203ENST00000487431 C4orf48Q5BLP8 95 aa12.14□□□□□ -0.47
RPL35-203ENST00000487431 PYY3Q5JQD4 70 aa12.14□□□□□ -0.47
RPL35-203ENST00000487431 ADAMTSL4-AS1Q5T5F5 129 aa12.14□□□□□ -0.47
RPL35-203ENST00000487431 Q8NBF4 154 aa12.14□□□□□ -0.47
RPL35-203ENST00000487431 COPS9Q8WXC6 57 aa12.14□□□□□ -0.47
RPL35-203ENST00000487431 LITAFQ99732 161 aa12.14□□□□□ -0.47
RPL35-203ENST00000487431 NCR3O14931 201 aa12.13□□□□□ -0.47
RPL35-203ENST00000487431 SPATA45Q537H7 98 aa12.13□□□□□ -0.47
RPL35-203ENST00000487431 LINC00483Q53H64 154 aa12.13□□□□□ -0.47
RPL35-203ENST00000487431 Q6ZVH6 145 aa12.13□□□□□ -0.47
RPL35-203ENST00000487431 SMCR5Q8TEV8 140 aa12.13□□□□□ -0.47
RPL35-203ENST00000487431 PAM16Q9Y3D7 125 aa12.13□□□□□ -0.47
RPL35-203ENST00000487431 KRTAP13-3Q3SY46 172 aa12.12□□□□□ -0.47
RPL35-203ENST00000487431 SPANXDQ9BXN6 97 aa12.12□□□□□ -0.47
RPL35-203ENST00000487431 SPANXCQ9NY87 97 aa12.12□□□□□ -0.47
RPL35-203ENST00000487431 COX8AP10176 69 aa12.11□□□□□ -0.47
RPL35-203ENST00000487431 ETDCA0A1B0GVM5 59 aa12.1□□□□□ -0.47
RPL35-203ENST00000487431 NDUFC2O95298 119 aa12.1□□□□□ -0.47
RPL35-203ENST00000487431 SPINK1P00995 79 aa12.1□□□□□ -0.47
RPL35-203ENST00000487431 LINC00308Q8TCZ7 52 aa12.1□□□□□ -0.47
RPL35-203ENST00000487431 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
RPL35-203ENST00000487431 DLEU1O43261 78 aa12.09□□□□□ -0.47
RPL35-203ENST00000487431 IFITM1P13164 125 aa12.09□□□□□ -0.47
RPL35-203ENST00000487431 NPC2P61916 151 aa12.09□□□□□ -0.47
RPL35-203ENST00000487431 SPANXB1Q9NS25 103 aaPredicted RBP12.08□□□□□ -0.48
RPL35-203ENST00000487431 TRBV10-2A0A0K0K1G8 114 aa12.07□□□□□ -0.48
RPL35-203ENST00000487431 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
RPL35-203ENST00000487431 B5MCH6 92 aa12.06□□□□□ -0.48
RPL35-203ENST00000487431 ASB16-AS1Q495Z4 193 aa12.06□□□□□ -0.48
RPL35-203ENST00000487431 S100A12P80511 92 aa12.05□□□□□ -0.48
RPL35-203ENST00000487431 RPS29P62273 56 aaKnown RBP12.04□□□□□ -0.48
RPL35-203ENST00000487431 SLC25A34Q6PIV7 304 aa12.04□□□□□ -0.48
RPL35-203ENST00000487431 C14orf144Q96I85 54 aa12.04□□□□□ -0.48
RPL35-203ENST00000487431 ERC2-IT1O76042 136 aa12.02□□□□□ -0.49
RPL35-203ENST00000487431 GAGE2AQ6NT46 116 aa12.02□□□□□ -0.49
RPL35-203ENST00000487431 EIF4EBP3O60516 100 aaPredicted RBP12.01□□□□□ -0.49
RPL35-203ENST00000487431 SSBP3-AS1Q7Z2R9 100 aa12.01□□□□□ -0.49
RPL35-203ENST00000487431 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
RPL35-203ENST00000487431 Q9BRP9 147 aa12.01□□□□□ -0.49
RPL35-203ENST00000487431 CBY1Q9Y3M2 126 aa12.01□□□□□ -0.49
RPL35-203ENST00000487431 DDTP30046 118 aa12□□□□□ -0.49
RPL35-203ENST00000487431 S100A7L2Q5SY68 101 aa12□□□□□ -0.49
RPL35-203ENST00000487431 Q6ZRX8 168 aa12□□□□□ -0.49
RPL35-203ENST00000487431 MUSTN1Q8IVN3 82 aa12□□□□□ -0.49
RPL35-203ENST00000487431 MOBPQ13875 183 aa11.99□□□□□ -0.49
RPL35-203ENST00000487431 Q8N377 158 aa11.99□□□□□ -0.49
RPL35-203ENST00000487431 HIGD1BQ9P298 99 aa11.99□□□□□ -0.49
RPL35-203ENST00000487431 SMIM6P0DI80 62 aa11.98□□□□□ -0.49
RPL35-203ENST00000487431 IGLV9-49A0A0B4J1Y8 123 aa11.97□□□□□ -0.49
RPL35-203ENST00000487431 HIST1H4GQ99525 98 aa11.97□□□□□ -0.49
RPL35-203ENST00000487431 KRTAP4-1Q9BYQ7 146 aa11.96□□□□□ -0.49
RPL35-203ENST00000487431 IGLV6-57P01721 117 aa11.95□□□□□ -0.5
RPL35-203ENST00000487431 SEC61BP60468 96 aaKnown RBP11.95□□□□□ -0.5
RPL35-203ENST00000487431 KRTAP9-6A0A140TA67 174 aa11.94□□□□□ -0.5
RPL35-203ENST00000487431 OR13C6PQ8NH95 151 aa11.94□□□□□ -0.5
RPL35-203ENST00000487431 SLC25A20O43772 301 aa11.93□□□□□ -0.5
RPL35-203ENST00000487431 LOC105371267A0A1B0GV96 52 aa11.92□□□□□ -0.5
RPL35-203ENST00000487431 UQCR10Q9UDW1 63 aa11.92□□□□□ -0.5
RPL35-203ENST00000487431 TRAV23DV6A0A075B6W5 121 aa11.91□□□□□ -0.5
RPL35-203ENST00000487431 TAL2Q16559 108 aa11.91□□□□□ -0.5
RPL35-203ENST00000487431 C2orf91Q6ZV80 131 aa11.91□□□□□ -0.5
RPL35-203ENST00000487431 TRAV13-2A0A0B4J235 113 aa11.9□□□□□ -0.5
RPL35-203ENST00000487431 A4D1N5 150 aa11.88□□□□□ -0.51
RPL35-203ENST00000487431 A6NDN8 102 aa11.88□□□□□ -0.51
RPL35-203ENST00000487431 LINC01547P58512 204 aaPredicted RBP11.88□□□□□ -0.51
RPL35-203ENST00000487431 XP32Q5T750 250 aa11.88□□□□□ -0.51
RPL35-203ENST00000487431 HINT1P49773 126 aaPredicted RBP11.87□□□□□ -0.51
RPL35-203ENST00000487431 ZNF73O43830 326 aaPredicted RBP11.85□□□□□ -0.51
RPL35-203ENST00000487431 TMEM238LA0A1B0GVL6 79 aa11.84□□□□□ -0.51
RPL35-203ENST00000487431 A6NJY4 79 aa11.84□□□□□ -0.51
RPL35-203ENST00000487431 HSD52Q0P140 79 aa11.83□□□□□ -0.52
RPL35-203ENST00000487431 C9orf153Q5TBE3 101 aa11.83□□□□□ -0.52
RPL35-203ENST00000487431 CEND1Q8N111 149 aa11.83□□□□□ -0.52
RPL35-203ENST00000487431 ST20-AS1Q8NBB2 130 aa11.82□□□□□ -0.52
RPL35-203ENST00000487431 SPRR1BP22528 89 aa11.79□□□□□ -0.52
RPL35-203ENST00000487431 C12orf57Q99622 126 aa11.79□□□□□ -0.52
RPL35-203ENST00000487431 C6orf99Q4VX62 202 aa11.78□□□□□ -0.52
RPL35-203ENST00000487431 RAB37Q96AX2 223 aa11.78□□□□□ -0.52
RPL35-203ENST00000487431 PRO1933Q9H354 126 aa11.78□□□□□ -0.52
RPL35-203ENST00000487431 A0A0B4J2C4 111 aa11.77□□□□□ -0.53
RPL35-203ENST00000487431 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
RPL35-203ENST00000487431 TRBV7-6A0A0J9YX20 115 aa11.76□□□□□ -0.53
RPL35-203ENST00000487431 TSTD3H0UI37 97 aa11.76□□□□□ -0.53
RPL35-203ENST00000487431 CFC1BP0CG36 223 aa11.75□□□□□ -0.53
RPL35-203ENST00000487431 CFC1P0CG37 223 aa11.75□□□□□ -0.53
RPL35-203ENST00000487431 COX7BP24311 80 aa11.75□□□□□ -0.53
RPL35-203ENST00000487431 LCE2CQ5TA81 110 aa11.74□□□□□ -0.53
RPL35-203ENST00000487431 SMIM11BQ8TCY0 68 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms