RNA–Protein interactions for RNA: ENST00000487411.5

STX4-210, Transcript of syntaxin 4, humanhuman

TSL 1 (best)

Gene STX4, Length 1,290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX4-210ENST00000487411 ATOH7Q8N100 152 aa13.17□□□□□ -0.3
STX4-210ENST00000487411 HIST3H2BBQ8N257 126 aa13.17□□□□□ -0.3
STX4-210ENST00000487411 C3orf22Q8N5N4 141 aa13.17□□□□□ -0.3
STX4-210ENST00000487411 Q6ZRX8 168 aa13.16□□□□□ -0.3
STX4-210ENST00000487411 PRR4Q16378 134 aa13.15□□□□□ -0.3
STX4-210ENST00000487411 LPAP08519 4548 aa13.14□□□□□ -0.31
STX4-210ENST00000487411 HIST1H2BLQ99880 126 aa13.14□□□□□ -0.31
STX4-210ENST00000487411 S100A2P29034 98 aa13.13□□□□□ -0.31
STX4-210ENST00000487411 SCGB1D4Q6XE38 83 aa13.13□□□□□ -0.31
STX4-210ENST00000487411 Q9BRP9 147 aa13.13□□□□□ -0.31
STX4-210ENST00000487411 SPANXDQ9BXN6 97 aa13.13□□□□□ -0.31
STX4-210ENST00000487411 CBY1Q9Y3M2 126 aa13.13□□□□□ -0.31
STX4-210ENST00000487411 ZNF73O43830 326 aaPredicted RBP13.12□□□□□ -0.31
STX4-210ENST00000487411 ERC2-IT1O76042 136 aa13.12□□□□□ -0.31
STX4-210ENST00000487411 LINC00483Q53H64 154 aa13.12□□□□□ -0.31
STX4-210ENST00000487411 CTAG1AP78358 180 aa13.11□□□□□ -0.31
STX4-210ENST00000487411 SNRPEP62304 92 aaKnown RBP13.1□□□□□ -0.31
STX4-210ENST00000487411 PPDPFQ9H3Y8 114 aa13.1□□□□□ -0.31
STX4-210ENST00000487411 JOSD1Q15040 202 aaPredicted RBP13.09□□□□□ -0.31
STX4-210ENST00000487411 S100A6P06703 90 aa13.08□□□□□ -0.32
STX4-210ENST00000487411 PCP2Q8IVA1 136 aa13.08□□□□□ -0.32
STX4-210ENST00000487411 OR13C6PQ8NH95 151 aa13.08□□□□□ -0.32
STX4-210ENST00000487411 GAGE2AQ6NT46 116 aa13.07□□□□□ -0.32
STX4-210ENST00000487411 LINC00518Q8N0U6 118 aa13.07□□□□□ -0.32
STX4-210ENST00000487411 COPS9Q8WXC6 57 aa13.06□□□□□ -0.32
STX4-210ENST00000487411 IFITM1P13164 125 aa13.05□□□□□ -0.32
STX4-210ENST00000487411 HINT1P49773 126 aaPredicted RBP13.05□□□□□ -0.32
STX4-210ENST00000487411 Q6ZVH6 145 aa13.05□□□□□ -0.32
STX4-210ENST00000487411 SPAG11AQ6PDA7 123 aa13.04□□□□□ -0.32
STX4-210ENST00000487411 Q8NBF4 154 aa13.01□□□□□ -0.33
STX4-210ENST00000487411 RETNLBQ9BQ08 111 aa13□□□□□ -0.33
STX4-210ENST00000487411 C5orf52A6NGY3 159 aa12.99□□□□□ -0.33
STX4-210ENST00000487411 HSBP1L1C9JCN9 74 aa12.99□□□□□ -0.33
STX4-210ENST00000487411 MUSTN1Q8IVN3 82 aa12.98□□□□□ -0.33
STX4-210ENST00000487411 RNF213Q63HN8 5207 aa12.97□□□□□ -0.33
STX4-210ENST00000487411 C4orf48Q5BLP8 95 aa12.97□□□□□ -0.33
STX4-210ENST00000487411 IGLV9-49A0A0B4J1Y8 123 aa12.96□□□□□ -0.33
STX4-210ENST00000487411 ELOF1P60002 83 aaKnown RBP12.96□□□□□ -0.33
STX4-210ENST00000487411 MOBPQ13875 183 aa12.96□□□□□ -0.33
STX4-210ENST00000487411 C6orf99Q4VX62 202 aa12.96□□□□□ -0.33
STX4-210ENST00000487411 DHRS4-AS1Q9P1J3 65 aa12.96□□□□□ -0.33
STX4-210ENST00000487411 SSBP3-AS1Q7Z2R9 100 aa12.95□□□□□ -0.34
STX4-210ENST00000487411 ST20-AS1Q8NBB2 130 aa12.95□□□□□ -0.34
STX4-210ENST00000487411 COX7BP24311 80 aa12.94□□□□□ -0.34
STX4-210ENST00000487411 TRBV7-6A0A0J9YX20 115 aa12.91□□□□□ -0.34
STX4-210ENST00000487411 A6NDN8 102 aa12.91□□□□□ -0.34
STX4-210ENST00000487411 SPINK1P00995 79 aa12.91□□□□□ -0.34
STX4-210ENST00000487411 SCGB1D1O95968 90 aa12.9□□□□□ -0.34
STX4-210ENST00000487411 SPRR1BP22528 89 aa12.9□□□□□ -0.34
STX4-210ENST00000487411 IGLV7-46A0A075B6I9 117 aa12.88□□□□□ -0.35
STX4-210ENST00000487411 TRAV13-2A0A0B4J235 113 aa12.88□□□□□ -0.35
STX4-210ENST00000487411 A0A1B0GWB2 263 aa12.87□□□□□ -0.35
STX4-210ENST00000487411 TPRXLQ17RH7 258 aa12.87□□□□□ -0.35
STX4-210ENST00000487411 C9orf153Q5TBE3 101 aa12.87□□□□□ -0.35
STX4-210ENST00000487411 RPS29P62273 56 aaKnown RBP12.86□□□□□ -0.35
STX4-210ENST00000487411 SLC25A34Q6PIV7 304 aa12.85□□□□□ -0.35
STX4-210ENST00000487411 FP248Q71RG6 208 aaPredicted RBP12.85□□□□□ -0.35
STX4-210ENST00000487411 SMIM11BQ8TCY0 68 aa12.82□□□□□ -0.36
STX4-210ENST00000487411 COX8AP10176 69 aa12.81□□□□□ -0.36
STX4-210ENST00000487411 A4D1N5 150 aa12.8□□□□□ -0.36
STX4-210ENST00000487411 LAMTOR3Q9UHA4 124 aa12.8□□□□□ -0.36
STX4-210ENST00000487411 TAL2Q16559 108 aa12.78□□□□□ -0.36
STX4-210ENST00000487411 Q8N377 158 aa12.78□□□□□ -0.36
STX4-210ENST00000487411 TEX49A0A1B0GTD5 131 aa12.77□□□□□ -0.37
STX4-210ENST00000487411 DLEU1O43261 78 aa12.77□□□□□ -0.37
STX4-210ENST00000487411 CDIP1Q9H305 208 aa12.77□□□□□ -0.37
STX4-210ENST00000487411 DEFB105AQ8NG35 78 aa12.75□□□□□ -0.37
STX4-210ENST00000487411 NHP2Q9NX24 153 aaKnown RBP12.75□□□□□ -0.37
STX4-210ENST00000487411 IGLV5-48A0A075B6I7 105 aa12.74□□□□□ -0.37
STX4-210ENST00000487411 SLC25A20O43772 301 aa12.74□□□□□ -0.37
STX4-210ENST00000487411 LINC01547P58512 204 aaPredicted RBP12.74□□□□□ -0.37
STX4-210ENST00000487411 HIST1H4GQ99525 98 aa12.74□□□□□ -0.37
STX4-210ENST00000487411 Q1RN00 199 aa12.73□□□□□ -0.37
STX4-210ENST00000487411 VAMP3Q15836 100 aa12.71□□□□□ -0.37
STX4-210ENST00000487411 SPATA45Q537H7 98 aa12.71□□□□□ -0.37
STX4-210ENST00000487411 SMIM29Q86T20 159 aa12.71□□□□□ -0.37
STX4-210ENST00000487411 PAM16Q9Y3D7 125 aa12.71□□□□□ -0.37
STX4-210ENST00000487411 C14orf144Q96I85 54 aa12.7□□□□□ -0.38
STX4-210ENST00000487411 KRTAP13-3Q3SY46 172 aa12.69□□□□□ -0.38
STX4-210ENST00000487411 C12orf57Q99622 126 aa12.69□□□□□ -0.38
STX4-210ENST00000487411 VAMP8Q9BV40 100 aa12.69□□□□□ -0.38
STX4-210ENST00000487411 HIGD1BQ9P298 99 aa12.68□□□□□ -0.38
STX4-210ENST00000487411 LINC00575Q6W349 94 aa12.67□□□□□ -0.38
STX4-210ENST00000487411 MUC17Q685J3 4493 aa12.67□□□□□ -0.38
STX4-210ENST00000487411 LIMD2Q9BT23 127 aa12.66□□□□□ -0.38
STX4-210ENST00000487411 PRO1933Q9H354 126 aa12.66□□□□□ -0.38
STX4-210ENST00000487411 CD164Q04900 197 aa12.64□□□□□ -0.39
STX4-210ENST00000487411 HRCT1Q6UXD1 115 aa12.64□□□□□ -0.39
STX4-210ENST00000487411 MUC2Q02817 5179 aa12.63□□□□□ -0.39
STX4-210ENST00000487411 C2orf91Q6ZV80 131 aa12.62□□□□□ -0.39
STX4-210ENST00000487411 hADV29S1A0JD25 119 aa12.61□□□□□ -0.39
STX4-210ENST00000487411 BVES-AS1Q5T3Y7 98 aa12.6□□□□□ -0.39
STX4-210ENST00000487411 Q6ZQY7 126 aa12.6□□□□□ -0.39
STX4-210ENST00000487411 CFC1BP0CG36 223 aa12.59□□□□□ -0.39
STX4-210ENST00000487411 CFC1P0CG37 223 aa12.59□□□□□ -0.39
STX4-210ENST00000487411 H7C2G1 150 aa12.58□□□□□ -0.4
STX4-210ENST00000487411 A0A0B4J2C4 111 aa12.57□□□□□ -0.4
STX4-210ENST00000487411 PYY3Q5JQD4 70 aa12.56□□□□□ -0.4
STX4-210ENST00000487411 RAB37Q96AX2 223 aa12.56□□□□□ -0.4
STX4-210ENST00000487411 F8WEM9 126 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms