RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 TSPEAR-AS2P59090 65 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 KRTDAPP60985 99 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 PHF5AQ7RTV0 110 aaKnown RBP3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 KRTAP11-1Q8IUC1 163 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 HIST1H2BLQ99880 126 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 XAGE1AQ9HD64 81 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 PKIGQ9Y2B9 76 aa3.79□□□□□ -1.8
RTFDC1-209ENST00000487211 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.8
RTFDC1-209ENST00000487211 LEPROTO15243 131 aa3.78□□□□□ -1.8
RTFDC1-209ENST00000487211 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
RTFDC1-209ENST00000487211 J3QQQ9 107 aa3.77□□□□□ -1.81
RTFDC1-209ENST00000487211 S100A6P06703 90 aa3.77□□□□□ -1.81
RTFDC1-209ENST00000487211 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
RTFDC1-209ENST00000487211 FAM19A5Q7Z5A7 132 aaPredicted RBP3.77□□□□□ -1.81
RTFDC1-209ENST00000487211 PLEKHB2Q96CS7 222 aa3.77□□□□□ -1.81
RTFDC1-209ENST00000487211 NDUFA12Q9UI09 145 aa3.77□□□□□ -1.81
RTFDC1-209ENST00000487211 ERG28Q9UKR5 140 aa3.77□□□□□ -1.81
RTFDC1-209ENST00000487211 IGKV2D-26A0A0A0MRZ7 120 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 KRTAP1-4P0C5Y4 121 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 SMIM13P0DJ93 91 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 S100A2P29034 98 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 LINC00158P58513 81 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 RPL37AP61513 92 aaKnown RBP3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 COX17Q14061 63 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 ATOH7Q8N100 152 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 Q8NDZ9 215 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 TTTY13Q9BZ97 58 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 SND1-IT1Q9HBX3 110 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 C22orf24Q9Y442 160 aa3.76□□□□□ -1.81
RTFDC1-209ENST00000487211 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
RTFDC1-209ENST00000487211 PCP4L1A6NKN8 68 aa3.75□□□□□ -1.81
RTFDC1-209ENST00000487211 HERVK_113P61574 105 aa3.75□□□□□ -1.81
RTFDC1-209ENST00000487211 SFTA2Q6UW10 78 aa3.75□□□□□ -1.81
RTFDC1-209ENST00000487211 C7orf33Q8WU49 177 aa3.75□□□□□ -1.81
RTFDC1-209ENST00000487211 FAT3Q8TDW7 4589 aa3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 A0A0J9YXY3 114 aa3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 M0QXV9 152 aa3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 LGALS3P17931 250 aaKnown RBP3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 PRR3P79522 188 aaKnown RBP3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 MEIG1Q5JSS6 88 aa3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 MIR7-3HGQ8N6C7 128 aa3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 LINC00167Q96N53 147 aa3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 PSORS1C2Q9UIG4 136 aa3.74□□□□□ -1.81
RTFDC1-209ENST00000487211 C20orf202A1L168 122 aa3.73□□□□□ -1.81
RTFDC1-209ENST00000487211 NMUP48645 174 aa3.73□□□□□ -1.81
RTFDC1-209ENST00000487211 DAND5Q8N907 189 aa3.73□□□□□ -1.81
RTFDC1-209ENST00000487211 TP73-AS1Q9UF72 201 aa3.73□□□□□ -1.81
RTFDC1-209ENST00000487211 LOC107984156A0A0G2JMH3 177 aa3.72□□□□□ -1.81
RTFDC1-209ENST00000487211 LINC00587B1AMM8 73 aa3.72□□□□□ -1.81
RTFDC1-209ENST00000487211 C1orf137Q5JT78 98 aa3.72□□□□□ -1.81
RTFDC1-209ENST00000487211 MRPL55Q7Z7F7 128 aaKnown RBP3.72□□□□□ -1.81
RTFDC1-209ENST00000487211 PCP2Q8IVA1 136 aa3.72□□□□□ -1.81
RTFDC1-209ENST00000487211 ARL17AQ8IVW1 177 aa3.72□□□□□ -1.81
RTFDC1-209ENST00000487211 TNXBP22105 4242 aa3.72□□□□□ -1.81
RTFDC1-209ENST00000487211 IGLV1-50A0A075B6I6 118 aa3.71□□□□□ -1.82
RTFDC1-209ENST00000487211 ZNF815PA8K554 130 aa3.71□□□□□ -1.82
RTFDC1-209ENST00000487211 A8MU10 97 aa3.71□□□□□ -1.82
RTFDC1-209ENST00000487211 UBE2BP63146 152 aa3.71□□□□□ -1.82
RTFDC1-209ENST00000487211 SOSTDC1Q6X4U4 206 aa3.71□□□□□ -1.82
RTFDC1-209ENST00000487211 BOD1L2Q8IYS8 172 aa3.71□□□□□ -1.82
RTFDC1-209ENST00000487211 HIST1H4GQ99525 98 aa3.71□□□□□ -1.82
RTFDC1-209ENST00000487211 SSPOA2VEC9 5147 aa3.7□□□□□ -1.82
RTFDC1-209ENST00000487211 IGLV7-43P04211 117 aa3.7□□□□□ -1.82
RTFDC1-209ENST00000487211 AKR1D1P51857 326 aa3.7□□□□□ -1.82
RTFDC1-209ENST00000487211 NPC2P61916 151 aa3.7□□□□□ -1.82
RTFDC1-209ENST00000487211 SPINK6Q6UWN8 80 aa3.7□□□□□ -1.82
RTFDC1-209ENST00000487211 NKAPP1Q8N9T2 125 aa3.7□□□□□ -1.82
RTFDC1-209ENST00000487211 IGKV2-28A0A075B6P5 120 aa3.69□□□□□ -1.82
RTFDC1-209ENST00000487211 M0R378 163 aa3.69□□□□□ -1.82
RTFDC1-209ENST00000487211 TIMM17BO60830 172 aa3.69□□□□□ -1.82
RTFDC1-209ENST00000487211 IGKV2D-28P01615 120 aa3.69□□□□□ -1.82
RTFDC1-209ENST00000487211 SEC61GP60059 68 aa3.69□□□□□ -1.82
RTFDC1-209ENST00000487211 JOSD1Q15040 202 aaPredicted RBP3.69□□□□□ -1.82
RTFDC1-209ENST00000487211 LINC00308Q8TCZ7 52 aa3.69□□□□□ -1.82
RTFDC1-209ENST00000487211 TMEM238C9JI98 176 aa3.68□□□□□ -1.82
RTFDC1-209ENST00000487211 NCR3O14931 201 aa3.68□□□□□ -1.82
RTFDC1-209ENST00000487211 TRBV10-3A0A0K0K1G6 114 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 HSBP1L1C9JCN9 74 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 ZNF861PO60384 105 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 BCE1O60756 84 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 NDUFC2O95298 119 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 PYY3Q5JQD4 70 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 SCGB1D4Q6XE38 83 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 KRTAP13-1Q8IUC0 172 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 SPANXDQ9BXN6 97 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 TMEM126AQ9H061 195 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 SPANXCQ9NY87 97 aa3.67□□□□□ -1.82
RTFDC1-209ENST00000487211 TRBV10-2A0A0K0K1G8 114 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 OXTP01178 125 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 MT1HL1P0DM35 61 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 MUSTN1Q8IVN3 82 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 C14orf144Q96I85 54 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 LINC01600Q96MT4 127 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 MIEN1Q9BRT3 115 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 KCNQ1DNQ9H478 68 aa3.66□□□□□ -1.82
RTFDC1-209ENST00000487211 KRTAP4-16G5E9R7 235 aaPredicted RBP3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 H0Y9J4 135 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 IGLV6-57P01721 117 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 COX8AP10176 69 aa3.65□□□□□ -1.83
RTFDC1-209ENST00000487211 DDTP30046 118 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms