RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 SPAG11AQ6PDA7 123 aa4.47□□□□□ -1.69
CPNE1-226ENST00000486021 KRTAP11-1Q8IUC1 163 aa4.47□□□□□ -1.69
CPNE1-226ENST00000486021 ATOH7Q8N100 152 aa4.47□□□□□ -1.69
CPNE1-226ENST00000486021 ZNF625Q96I27 306 aaPredicted RBP4.47□□□□□ -1.69
CPNE1-226ENST00000486021 A0A096LNJ9 63 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 TMEM223A0PJW6 202 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 H3BUT2 72 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 VPREB1P12018 145 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 PLNP26678 52 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 FAM19A2Q8N3H0 131 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 PLEKHB2Q96CS7 222 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 SPANXDQ9BXN6 97 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 TMEM126AQ9H061 195 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 SPANXCQ9NY87 97 aa4.46□□□□□ -1.7
CPNE1-226ENST00000486021 PRYO14603 147 aa4.45□□□□□ -1.7
CPNE1-226ENST00000486021 NMUP48645 174 aa4.45□□□□□ -1.7
CPNE1-226ENST00000486021 BOD1L2Q8IYS8 172 aa4.45□□□□□ -1.7
CPNE1-226ENST00000486021 URB1-AS1Q96HZ7 61 aa4.45□□□□□ -1.7
CPNE1-226ENST00000486021 ETDCA0A1B0GVM5 59 aa4.44□□□□□ -1.7
CPNE1-226ENST00000486021 LEPROTO15243 131 aa4.44□□□□□ -1.7
CPNE1-226ENST00000486021 TAL2Q16559 108 aa4.44□□□□□ -1.7
CPNE1-226ENST00000486021 Q6ZVH6 145 aa4.44□□□□□ -1.7
CPNE1-226ENST00000486021 LINC00304Q8N9R0 145 aa4.44□□□□□ -1.7
CPNE1-226ENST00000486021 HIGD2AQ9BW72 106 aa4.44□□□□□ -1.7
CPNE1-226ENST00000486021 NDUFA12Q9UI09 145 aa4.44□□□□□ -1.7
CPNE1-226ENST00000486021 TSPAN13O95857 204 aa4.43□□□□□ -1.7
CPNE1-226ENST00000486021 LGALS3P17931 250 aaKnown RBP4.43□□□□□ -1.7
CPNE1-226ENST00000486021 LINC01545Q5VT33 79 aa4.43□□□□□ -1.7
CPNE1-226ENST00000486021 LINC00337Q8N6G1 96 aa4.43□□□□□ -1.7
CPNE1-226ENST00000486021 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
CPNE1-226ENST00000486021 HIGD1BQ9P298 99 aa4.43□□□□□ -1.7
CPNE1-226ENST00000486021 A0A0U1RRA0 63 aa4.42□□□□□ -1.7
CPNE1-226ENST00000486021 DPM2O94777 84 aa4.42□□□□□ -1.7
CPNE1-226ENST00000486021 IGKCP01834 107 aa4.42□□□□□ -1.7
CPNE1-226ENST00000486021 PRLHP81277 87 aa4.42□□□□□ -1.7
CPNE1-226ENST00000486021 KRTAP13-1Q8IUC0 172 aa4.42□□□□□ -1.7
CPNE1-226ENST00000486021 MIR7-3HGQ8N6C7 128 aa4.42□□□□□ -1.7
CPNE1-226ENST00000486021 A0A087X002 238 aa4.41□□□□□ -1.7
CPNE1-226ENST00000486021 TRBV10-2A0A0K0K1G8 114 aa4.41□□□□□ -1.7
CPNE1-226ENST00000486021 S100A7L2Q5SY68 101 aa4.41□□□□□ -1.7
CPNE1-226ENST00000486021 COPS9Q8WXC6 57 aa4.41□□□□□ -1.7
CPNE1-226ENST00000486021 J3QQQ9 107 aa4.4□□□□□ -1.71
CPNE1-226ENST00000486021 NDUFC2O95298 119 aa4.4□□□□□ -1.71
CPNE1-226ENST00000486021 RAB37Q96AX2 223 aa4.4□□□□□ -1.71
CPNE1-226ENST00000486021 KCNQ1DNQ9H478 68 aa4.4□□□□□ -1.71
CPNE1-226ENST00000486021 TNXBP22105 4242 aa4.39□□□□□ -1.71
CPNE1-226ENST00000486021 LOC107984156A0A0G2JMH3 177 aa4.39□□□□□ -1.71
CPNE1-226ENST00000486021 NCR3O14931 201 aa4.39□□□□□ -1.71
CPNE1-226ENST00000486021 ARL17AQ8IVW1 177 aa4.39□□□□□ -1.71
CPNE1-226ENST00000486021 CDIP1Q9H305 208 aa4.39□□□□□ -1.71
CPNE1-226ENST00000486021 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
CPNE1-226ENST00000486021 A0A1B0GWB2 263 aa4.38□□□□□ -1.71
CPNE1-226ENST00000486021 H3BMG7 143 aa4.38□□□□□ -1.71
CPNE1-226ENST00000486021 SPINK1P00995 79 aa4.38□□□□□ -1.71
CPNE1-226ENST00000486021 C2orf91Q6ZV80 131 aa4.38□□□□□ -1.71
CPNE1-226ENST00000486021 FP248Q71RG6 208 aaPredicted RBP4.38□□□□□ -1.71
CPNE1-226ENST00000486021 SPRR4Q96PI1 79 aa4.38□□□□□ -1.71
CPNE1-226ENST00000486021 TRBV20-1A0A075B6N2 111 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 SNCGO76070 127 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 SPRR1AP35321 89 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 TPRXLQ17RH7 258 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 SSBP3-AS1Q7Z2R9 100 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 CEND1Q8N111 149 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 SMCR5Q8TEV8 140 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 PPDPFLQ8WWR9 84 aa4.37□□□□□ -1.71
CPNE1-226ENST00000486021 IGLV7-46A0A075B6I9 117 aa4.36□□□□□ -1.71
CPNE1-226ENST00000486021 TRBV10-3A0A0K0K1G6 114 aa4.36□□□□□ -1.71
CPNE1-226ENST00000486021 E9PLD3 99 aa4.36□□□□□ -1.71
CPNE1-226ENST00000486021 RPS29P62273 56 aaKnown RBP4.36□□□□□ -1.71
CPNE1-226ENST00000486021 KRTAP13-2Q52LG2 175 aa4.36□□□□□ -1.71
CPNE1-226ENST00000486021 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
CPNE1-226ENST00000486021 Q6Q795 121 aa4.35□□□□□ -1.71
CPNE1-226ENST00000486021 Q6ZRX8 168 aa4.35□□□□□ -1.71
CPNE1-226ENST00000486021 HIST1H4GQ99525 98 aa4.35□□□□□ -1.71
CPNE1-226ENST00000486021 NHP2Q9NX24 153 aaKnown RBP4.35□□□□□ -1.71
CPNE1-226ENST00000486021 TRAV23DV6A0A075B6W5 121 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 B5MCH6 92 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 TIMM17BO60830 172 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 SCGB1C2P0DMR2 95 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 IFITM1P13164 125 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 ETDBQ3ZM63 59 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 SS18L2Q9UHA2 77 aa4.34□□□□□ -1.71
CPNE1-226ENST00000486021 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
CPNE1-226ENST00000486021 LINC00483Q53H64 154 aa4.33□□□□□ -1.72
CPNE1-226ENST00000486021 TEN1Q86WV5 123 aa4.33□□□□□ -1.72
CPNE1-226ENST00000486021 C3orf22Q8N5N4 141 aa4.33□□□□□ -1.72
CPNE1-226ENST00000486021 DAND5Q8N907 189 aa4.33□□□□□ -1.72
CPNE1-226ENST00000486021 PPDPFQ9H3Y8 114 aa4.33□□□□□ -1.72
CPNE1-226ENST00000486021 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
CPNE1-226ENST00000486021 IGLV9-49A0A0B4J1Y8 123 aa4.32□□□□□ -1.72
CPNE1-226ENST00000486021 A0A0J9YXY3 114 aa4.32□□□□□ -1.72
CPNE1-226ENST00000486021 KRTAP4-16G5E9R7 235 aaPredicted RBP4.32□□□□□ -1.72
CPNE1-226ENST00000486021 SLC25A20O43772 301 aa4.32□□□□□ -1.72
CPNE1-226ENST00000486021 ZNF73O43830 326 aaPredicted RBP4.32□□□□□ -1.72
CPNE1-226ENST00000486021 IGLV6-57P01721 117 aa4.32□□□□□ -1.72
CPNE1-226ENST00000486021 C5orf47Q569G3 176 aa4.32□□□□□ -1.72
CPNE1-226ENST00000486021 C9orf153Q5TBE3 101 aa4.32□□□□□ -1.72
CPNE1-226ENST00000486021 SCGB1D4Q6XE38 83 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms