RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
VPS50-218ENST00000485994 TMEM238C9JI98 176 aa4.11□□□□□ -1.75
VPS50-218ENST00000485994 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
VPS50-218ENST00000485994 PRYO14603 147 aa4.11□□□□□ -1.75
VPS50-218ENST00000485994 NDUFC2O95298 119 aa4.11□□□□□ -1.75
VPS50-218ENST00000485994 KRTDAPP60985 99 aa4.11□□□□□ -1.75
VPS50-218ENST00000485994 FAM19A1Q7Z5A9 133 aa4.11□□□□□ -1.75
VPS50-218ENST00000485994 BOD1L2Q8IYS8 172 aa4.11□□□□□ -1.75
VPS50-218ENST00000485994 LPAP08519 4548 aa4.1□□□□□ -1.75
VPS50-218ENST00000485994 A0A0U1RRA0 63 aa4.1□□□□□ -1.75
VPS50-218ENST00000485994 E9PLD3 99 aa4.1□□□□□ -1.75
VPS50-218ENST00000485994 KRTAP13-2Q52LG2 175 aa4.1□□□□□ -1.75
VPS50-218ENST00000485994 S100A6P06703 90 aa4.09□□□□□ -1.75
VPS50-218ENST00000485994 LGALS3P17931 250 aaKnown RBP4.09□□□□□ -1.75
VPS50-218ENST00000485994 PRLHP81277 87 aa4.09□□□□□ -1.75
VPS50-218ENST00000485994 ANAPC11Q9NYG5 84 aa4.09□□□□□ -1.75
VPS50-218ENST00000485994 TRBV10-3A0A0K0K1G6 114 aa4.08□□□□□ -1.76
VPS50-218ENST00000485994 TIMM17BO60830 172 aa4.08□□□□□ -1.76
VPS50-218ENST00000485994 IGLV6-57P01721 117 aa4.08□□□□□ -1.76
VPS50-218ENST00000485994 S100A12P80511 92 aa4.08□□□□□ -1.76
VPS50-218ENST00000485994 ANKRD39Q53RE8 183 aa4.08□□□□□ -1.76
VPS50-218ENST00000485994 ZNF706Q9Y5V0 76 aaPredicted RBP4.08□□□□□ -1.76
VPS50-218ENST00000485994 A0A0J9YXY3 114 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 S100A2P29034 98 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 ADAMTSL4-AS1Q5T5F5 129 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 SPAG11AQ6PDA7 123 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 ATOH7Q8N100 152 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 SMCR5Q8TEV8 140 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 SPRR4Q96PI1 79 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 TTTY13Q9BZ97 58 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 SPANXB1Q9NS25 103 aaPredicted RBP4.07□□□□□ -1.76
VPS50-218ENST00000485994 CBY1Q9Y3M2 126 aa4.07□□□□□ -1.76
VPS50-218ENST00000485994 ETDCA0A1B0GVM5 59 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 B5MCH6 92 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 DDTP30046 118 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 AKR1D1P51857 326 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 LINC00304Q8N9R0 145 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 MIEN1Q9BRT3 115 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 HIGD2AQ9BW72 106 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 PPDPFQ9H3Y8 114 aa4.06□□□□□ -1.76
VPS50-218ENST00000485994 NCR3O14931 201 aa4.05□□□□□ -1.76
VPS50-218ENST00000485994 TSPAN13O95857 204 aa4.05□□□□□ -1.76
VPS50-218ENST00000485994 JOSD1Q15040 202 aaPredicted RBP4.05□□□□□ -1.76
VPS50-218ENST00000485994 PRR4Q16378 134 aa4.05□□□□□ -1.76
VPS50-218ENST00000485994 SOSTDC1Q6X4U4 206 aa4.05□□□□□ -1.76
VPS50-218ENST00000485994 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
VPS50-218ENST00000485994 DAND5Q8N907 189 aa4.05□□□□□ -1.76
VPS50-218ENST00000485994 LITAFQ99732 161 aa4.05□□□□□ -1.76
VPS50-218ENST00000485994 C20orf202A1L168 122 aa4.04□□□□□ -1.76
VPS50-218ENST00000485994 Q6ZRX8 168 aa4.04□□□□□ -1.76
VPS50-218ENST00000485994 LINC00518Q8N0U6 118 aa4.04□□□□□ -1.76
VPS50-218ENST00000485994 C3orf22Q8N5N4 141 aa4.04□□□□□ -1.76
VPS50-218ENST00000485994 LINC00308Q8TCZ7 52 aa4.04□□□□□ -1.76
VPS50-218ENST00000485994 SPANXCQ9NY87 97 aa4.04□□□□□ -1.76
VPS50-218ENST00000485994 TMA7Q9Y2S6 64 aaKnown RBP4.04□□□□□ -1.76
VPS50-218ENST00000485994 S100A7L2Q5SY68 101 aa4.03□□□□□ -1.76
VPS50-218ENST00000485994 Q6ZVH6 145 aa4.03□□□□□ -1.76
VPS50-218ENST00000485994 PCP2Q8IVA1 136 aa4.03□□□□□ -1.76
VPS50-218ENST00000485994 Q9BRP9 147 aa4.03□□□□□ -1.76
VPS50-218ENST00000485994 TRAV23DV6A0A075B6W5 121 aa4.02□□□□□ -1.77
VPS50-218ENST00000485994 ZNF815PA8K554 130 aa4.02□□□□□ -1.77
VPS50-218ENST00000485994 ZNF73O43830 326 aaPredicted RBP4.02□□□□□ -1.77
VPS50-218ENST00000485994 SCGB1D1O95968 90 aa4.02□□□□□ -1.77
VPS50-218ENST00000485994 SPINK1P00995 79 aa4.02□□□□□ -1.77
VPS50-218ENST00000485994 HINT1P49773 126 aaPredicted RBP4.02□□□□□ -1.77
VPS50-218ENST00000485994 RPS29P62273 56 aaKnown RBP4.02□□□□□ -1.77
VPS50-218ENST00000485994 ERC2-IT1O76042 136 aa4.01□□□□□ -1.77
VPS50-218ENST00000485994 IFITM1P13164 125 aa4.01□□□□□ -1.77
VPS50-218ENST00000485994 TPRXLQ17RH7 258 aa4.01□□□□□ -1.77
VPS50-218ENST00000485994 PYY3Q5JQD4 70 aa4.01□□□□□ -1.77
VPS50-218ENST00000485994 FP248Q71RG6 208 aaPredicted RBP4.01□□□□□ -1.77
VPS50-218ENST00000485994 COPS9Q8WXC6 57 aa4.01□□□□□ -1.77
VPS50-218ENST00000485994 SPANXDQ9BXN6 97 aa4.01□□□□□ -1.77
VPS50-218ENST00000485994 MUC2Q02817 5179 aa4□□□□□ -1.77
VPS50-218ENST00000485994 TRBV7-6A0A0J9YX20 115 aa4□□□□□ -1.77
VPS50-218ENST00000485994 SPRR1BP22528 89 aa4□□□□□ -1.77
VPS50-218ENST00000485994 GAGE2AQ6NT46 116 aa4□□□□□ -1.77
VPS50-218ENST00000485994 DHRS4-AS1Q9P1J3 65 aa4□□□□□ -1.77
VPS50-218ENST00000485994 IGLV7-46A0A075B6I9 117 aa3.99□□□□□ -1.77
VPS50-218ENST00000485994 NPC2P61916 151 aa3.99□□□□□ -1.77
VPS50-218ENST00000485994 Q8NBF4 154 aa3.99□□□□□ -1.77
VPS50-218ENST00000485994 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
VPS50-218ENST00000485994 COX8AP10176 69 aa3.98□□□□□ -1.77
VPS50-218ENST00000485994 LOC105371267A0A1B0GV96 52 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 HSBP1L1C9JCN9 74 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 DLEU1O43261 78 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 ELOF1P60002 83 aaKnown RBP3.97□□□□□ -1.77
VPS50-218ENST00000485994 SPATA45Q537H7 98 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 SLC25A34Q6PIV7 304 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 SCGB1D4Q6XE38 83 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 MUSTN1Q8IVN3 82 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 OR13C6PQ8NH95 151 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 RETNLBQ9BQ08 111 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 PAM16Q9Y3D7 125 aa3.97□□□□□ -1.77
VPS50-218ENST00000485994 COX7BP24311 80 aa3.96□□□□□ -1.78
VPS50-218ENST00000485994 C14orf144Q96I85 54 aa3.96□□□□□ -1.78
VPS50-218ENST00000485994 IGLV9-49A0A0B4J1Y8 123 aa3.95□□□□□ -1.78
VPS50-218ENST00000485994 TRAV13-2A0A0B4J235 113 aa3.95□□□□□ -1.78
VPS50-218ENST00000485994 A0A1B0GWB2 263 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms