RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
SMARCD3-211ENST00000485592 ARL17AQ8IVW1 177 aa7.77□□□□□ -1.17
SMARCD3-211ENST00000485592 C20orf202A1L168 122 aa7.76□□□□□ -1.17
SMARCD3-211ENST00000485592 SPINK1P00995 79 aa7.76□□□□□ -1.17
SMARCD3-211ENST00000485592 S100A6P06703 90 aa7.76□□□□□ -1.17
SMARCD3-211ENST00000485592 S100A2P29034 98 aa7.76□□□□□ -1.17
SMARCD3-211ENST00000485592 SOSTDC1Q6X4U4 206 aa7.76□□□□□ -1.17
SMARCD3-211ENST00000485592 LINC00587B1AMM8 73 aa7.75□□□□□ -1.17
SMARCD3-211ENST00000485592 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
SMARCD3-211ENST00000485592 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
SMARCD3-211ENST00000485592 PRYO14603 147 aa7.74□□□□□ -1.17
SMARCD3-211ENST00000485592 ZNF815PA8K554 130 aa7.73□□□□□ -1.17
SMARCD3-211ENST00000485592 NCR3O14931 201 aa7.73□□□□□ -1.17
SMARCD3-211ENST00000485592 ETDCA0A1B0GVM5 59 aa7.71□□□□□ -1.18
SMARCD3-211ENST00000485592 TIMM17BO60830 172 aa7.71□□□□□ -1.18
SMARCD3-211ENST00000485592 PCP2Q8IVA1 136 aa7.71□□□□□ -1.18
SMARCD3-211ENST00000485592 SMCR5Q8TEV8 140 aa7.71□□□□□ -1.18
SMARCD3-211ENST00000485592 KRTAP4-1Q9BYQ7 146 aa7.71□□□□□ -1.18
SMARCD3-211ENST00000485592 NPC2P61916 151 aa7.7□□□□□ -1.18
SMARCD3-211ENST00000485592 TRBV10-3A0A0K0K1G6 114 aa7.69□□□□□ -1.18
SMARCD3-211ENST00000485592 SPRR1AP35321 89 aa7.69□□□□□ -1.18
SMARCD3-211ENST00000485592 AKR1D1P51857 326 aa7.69□□□□□ -1.18
SMARCD3-211ENST00000485592 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
SMARCD3-211ENST00000485592 CRCT1Q9UGL9 99 aa7.69□□□□□ -1.18
SMARCD3-211ENST00000485592 NDUFC2O95298 119 aa7.68□□□□□ -1.18
SMARCD3-211ENST00000485592 S100A12P80511 92 aa7.68□□□□□ -1.18
SMARCD3-211ENST00000485592 LINC00483Q53H64 154 aa7.68□□□□□ -1.18
SMARCD3-211ENST00000485592 LINC00308Q8TCZ7 52 aa7.68□□□□□ -1.18
SMARCD3-211ENST00000485592 KCNQ1DNQ9H478 68 aa7.68□□□□□ -1.18
SMARCD3-211ENST00000485592 SPANXB1Q9NS25 103 aaPredicted RBP7.68□□□□□ -1.18
SMARCD3-211ENST00000485592 IGLV9-49A0A0B4J1Y8 123 aa7.67□□□□□ -1.18
SMARCD3-211ENST00000485592 TRBV10-2A0A0K0K1G8 114 aa7.67□□□□□ -1.18
SMARCD3-211ENST00000485592 KRTAP4-16G5E9R7 235 aaPredicted RBP7.67□□□□□ -1.18
SMARCD3-211ENST00000485592 MOBPQ13875 183 aa7.67□□□□□ -1.18
SMARCD3-211ENST00000485592 GAGE2AQ6NT46 116 aa7.67□□□□□ -1.18
SMARCD3-211ENST00000485592 Q8N377 158 aa7.67□□□□□ -1.18
SMARCD3-211ENST00000485592 MIEN1Q9BRT3 115 aa7.67□□□□□ -1.18
SMARCD3-211ENST00000485592 SSBP3-AS1Q7Z2R9 100 aa7.66□□□□□ -1.18
SMARCD3-211ENST00000485592 SPANXDQ9BXN6 97 aa7.66□□□□□ -1.18
SMARCD3-211ENST00000485592 SPANXCQ9NY87 97 aa7.66□□□□□ -1.18
SMARCD3-211ENST00000485592 SLC25A20O43772 301 aa7.65□□□□□ -1.18
SMARCD3-211ENST00000485592 IGLV6-57P01721 117 aa7.65□□□□□ -1.18
SMARCD3-211ENST00000485592 DDTP30046 118 aa7.64□□□□□ -1.19
SMARCD3-211ENST00000485592 XP32Q5T750 250 aa7.64□□□□□ -1.19
SMARCD3-211ENST00000485592 SCGB1D4Q6XE38 83 aa7.64□□□□□ -1.19
SMARCD3-211ENST00000485592 SCGB1D1O95968 90 aa7.63□□□□□ -1.19
SMARCD3-211ENST00000485592 B5MCH6 92 aa7.61□□□□□ -1.19
SMARCD3-211ENST00000485592 HSBP1L1C9JCN9 74 aa7.6□□□□□ -1.19
SMARCD3-211ENST00000485592 ERC2-IT1O76042 136 aa7.6□□□□□ -1.19
SMARCD3-211ENST00000485592 TMA7Q9Y2S6 64 aaKnown RBP7.6□□□□□ -1.19
SMARCD3-211ENST00000485592 JOSD1Q15040 202 aaPredicted RBP7.59□□□□□ -1.19
SMARCD3-211ENST00000485592 C9orf153Q5TBE3 101 aa7.59□□□□□ -1.19
SMARCD3-211ENST00000485592 TRAV23DV6A0A075B6W5 121 aa7.58□□□□□ -1.2
SMARCD3-211ENST00000485592 IFITM1P13164 125 aa7.58□□□□□ -1.2
SMARCD3-211ENST00000485592 S100A7L2Q5SY68 101 aa7.58□□□□□ -1.2
SMARCD3-211ENST00000485592 Q6ZRX8 168 aa7.58□□□□□ -1.2
SMARCD3-211ENST00000485592 Q6ZVH6 145 aa7.58□□□□□ -1.2
SMARCD3-211ENST00000485592 Q9BRP9 147 aa7.58□□□□□ -1.2
SMARCD3-211ENST00000485592 ZNF73O43830 326 aaPredicted RBP7.57□□□□□ -1.2
SMARCD3-211ENST00000485592 COX8AP10176 69 aa7.57□□□□□ -1.2
SMARCD3-211ENST00000485592 MUSTN1Q8IVN3 82 aa7.57□□□□□ -1.2
SMARCD3-211ENST00000485592 CFC1BP0CG36 223 aa7.56□□□□□ -1.2
SMARCD3-211ENST00000485592 PYY3Q5JQD4 70 aa7.56□□□□□ -1.2
SMARCD3-211ENST00000485592 LCE2CQ5TA81 110 aa7.56□□□□□ -1.2
SMARCD3-211ENST00000485592 PAM16Q9Y3D7 125 aa7.56□□□□□ -1.2
SMARCD3-211ENST00000485592 FSIP2Q5CZC0 6907 aa7.55□□□□□ -1.2
SMARCD3-211ENST00000485592 DLEU1O43261 78 aa7.54□□□□□ -1.2
SMARCD3-211ENST00000485592 SPATA45Q537H7 98 aa7.54□□□□□ -1.2
SMARCD3-211ENST00000485592 MT1HP80294 61 aa7.53□□□□□ -1.2
SMARCD3-211ENST00000485592 LINC00518Q8N0U6 118 aa7.53□□□□□ -1.2
SMARCD3-211ENST00000485592 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
SMARCD3-211ENST00000485592 C14orf144Q96I85 54 aa7.53□□□□□ -1.2
SMARCD3-211ENST00000485592 VAMP8Q9BV40 100 aa7.53□□□□□ -1.2
SMARCD3-211ENST00000485592 IGLV8-61A0A075B6I0 122 aa7.52□□□□□ -1.21
SMARCD3-211ENST00000485592 KRTAP19-2Q3LHN2 52 aa7.52□□□□□ -1.21
SMARCD3-211ENST00000485592 PCOTHQ58A44 107 aa7.52□□□□□ -1.21
SMARCD3-211ENST00000485592 C2orf91Q6ZV80 131 aa7.52□□□□□ -1.21
SMARCD3-211ENST00000485592 OR13C6PQ8NH95 151 aa7.52□□□□□ -1.21
SMARCD3-211ENST00000485592 LIMD2Q9BT23 127 aa7.52□□□□□ -1.21
SMARCD3-211ENST00000485592 A4D1N5 150 aa7.5□□□□□ -1.21
SMARCD3-211ENST00000485592 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
SMARCD3-211ENST00000485592 ELOF1P60002 83 aaKnown RBP7.49□□□□□ -1.21
SMARCD3-211ENST00000485592 C9orf92A6NGG3 77 aa7.48□□□□□ -1.21
SMARCD3-211ENST00000485592 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
SMARCD3-211ENST00000485592 ST20-AS1Q8NBB2 130 aa7.48□□□□□ -1.21
SMARCD3-211ENST00000485592 CBY1Q9Y3M2 126 aa7.48□□□□□ -1.21
SMARCD3-211ENST00000485592 A6NDN8 102 aa7.47□□□□□ -1.21
SMARCD3-211ENST00000485592 SLC25A34Q6PIV7 304 aa7.47□□□□□ -1.21
SMARCD3-211ENST00000485592 HRCT1Q6UXD1 115 aa7.47□□□□□ -1.21
SMARCD3-211ENST00000485592 HIGD1BQ9P298 99 aa7.47□□□□□ -1.21
SMARCD3-211ENST00000485592 TRAV13-2A0A0B4J235 113 aa7.46□□□□□ -1.22
SMARCD3-211ENST00000485592 SMIM11BQ8TCY0 68 aa7.46□□□□□ -1.22
SMARCD3-211ENST00000485592 HIST1H4GQ99525 98 aa7.46□□□□□ -1.22
SMARCD3-211ENST00000485592 C12orf57Q99622 126 aa7.46□□□□□ -1.22
SMARCD3-211ENST00000485592 TRBV7-6A0A0J9YX20 115 aa7.45□□□□□ -1.22
SMARCD3-211ENST00000485592 COX7BP24311 80 aa7.45□□□□□ -1.22
SMARCD3-211ENST00000485592 LORP23490 312 aaPredicted RBP7.44□□□□□ -1.22
SMARCD3-211ENST00000485592 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
SMARCD3-211ENST00000485592 DHRS4-AS1Q9P1J3 65 aa7.43□□□□□ -1.22
SMARCD3-211ENST00000485592 LAMTOR3Q9UHA4 124 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms